CX300614
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_XANC5 (Glycine dehydrogenase [decarboxylating] OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=gcvP PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 3.669e-17 Identity = 42/88 (47.73%), Postives = 55/88 (62.50%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+ DA+I IREE IE+G+ D +N LK APH + + WT RE AA P L+ K+WP RVDNVYGD+N++C +P Sbjct: 857 LDRFIDAMIQIREEIRAIEDGRLDREDNPLKHAPHTATQVSASEWTHAYPRELAAFPLPSLKQQKYWPPVARVDNVYGDKNVMCACIP 944
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_XANAC (Glycine dehydrogenase [decarboxylating] OS=Xanthomonas axonopodis pv. citri GN=gcvP PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 3.669e-17 Identity = 42/88 (47.73%), Postives = 55/88 (62.50%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+ DA+I IREE IE+G+ D +N LK APH + + WT RE AA P L+ K+WP RVDNVYGD+N++C +P Sbjct: 880 LDRFIDAMIQIREEIRAIEDGRLDREDNPLKHAPHTATQVSASEWTHAYPRELAAFPLPSLKQQKYWPPVARVDNVYGDKNVMCACIP 967
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_MOUSE (Glycine dehydrogenase [decarboxylating], mitochondrial OS=Mus musculus GN=Gldc PE=1 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 3.669e-17 Identity = 42/89 (47.19%), Postives = 59/89 (66.29%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLR-FAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+CDA+ISIR+E A IE G+ D N LK +PH + + W +P SRE AA P +++ KFWP R+D++YGD++L+CT P Sbjct: 921 LDRFCDAMISIRQEIADIEEGRIDPRVNPLKMSPHSLTCVTSSCWDRPYSREVAAFPLPFVKPENKFWPTIARIDDIYGDQHLVCTCPP 1009
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_BURVG (Glycine dehydrogenase [decarboxylating] OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=gcvP PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 3.669e-17 Identity = 41/88 (46.59%), Postives = 56/88 (63.64%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+ A+I+IREE +E G+AD +N L+ APH +++ + W SRE AA P + L K+WP GR DN YGDRNL C+ +P Sbjct: 883 LDRFIAAMIAIREEIRAVEEGRADREDNPLRHAPHTAAVVTANEWPHAYSREQAAYPVASLVTNKYWPPVGRADNAYGDRNLFCSCVP 970
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_RHOPA (Glycine dehydrogenase [decarboxylating] OS=Rhodopseudomonas palustris GN=gcvP PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 4.792e-17 Identity = 42/88 (47.73%), Postives = 54/88 (61.36%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 +DR+CDA+I+IR E AQ+E G+ I + L+ APH + WT+P R PA R K+W GRVDNVYGDRNLIC+ P Sbjct: 888 IDRFCDAMIAIRREIAQVEAGRYPIEQSPLRHAPHTAHDVTSAEWTRPYPRTEGCFPAPNSRTDKYWSPVGRVDNVYGDRNLICSCPP 975
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_PSYIN (Glycine dehydrogenase [decarboxylating] OS=Psychromonas ingrahamii (strain 37) GN=gcvP PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 4.792e-17 Identity = 43/85 (50.59%), Postives = 55/85 (64.71%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICT 256 LDR+CDA+I+IR E QIE+G+ +N L APH LM WT SRE A P+ + +K+WP RVDNV+GDRNLIC+ Sbjct: 872 LDRFCDAMIAIRHEIKQIEDGEWSATDNPLVNAPHTQVDLMESEWTHGYSRELACFPSKHSKDSKYWPTVNRVDNVFGDRNLICS 956
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_PELUB (Glycine dehydrogenase [decarboxylating] OS=Pelagibacter ubique GN=gcvP PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 4.792e-17 Identity = 40/85 (47.06%), Postives = 55/85 (64.71%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICT 256 +D++C LI I++E +I++G+ D +N LK APH L + W RE AA P+ +LR K+WP GRVDNVYGD+NL CT Sbjct: 856 IDKFCSTLIKIKQEIDKIQSGEYDKTDNPLKNAPHTHVELTSNKWDHKYEREEAAYPSEFLRTNKYWPPVGRVDNVYGDKNLFCT 940
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_NITWN (Glycine dehydrogenase [decarboxylating] OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=gcvP PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 4.792e-17 Identity = 40/88 (45.45%), Postives = 56/88 (63.64%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+CDA+I+IR+E A+IE G+ + + L+ APH + D W++P SR P+ R K+W GRVDN YGDRNL+C+ P Sbjct: 858 LDRFCDAMIAIRQEIAEIEAGRWKVEASPLRHAPHTAHDIADDAWSRPYSRAQGCFPSGSSRSDKYWCPVGRVDNAYGDRNLVCSCPP 945
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_HUMAN (Glycine dehydrogenase [decarboxylating], mitochondrial OS=Homo sapiens GN=GLDC PE=1 SV=2) HSP 1 Score: 87.4261 bits (215), Expect = 4.792e-17 Identity = 42/89 (47.19%), Postives = 59/89 (66.29%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPNSRENAA*PASWLR-FAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+CDA+ISIR+E A IE G+ D N LK +PH + + W +P SRE AA P +++ KFWP R+D++YGD++L+CT P Sbjct: 916 LDRFCDAMISIRQEIADIEEGRIDPRVNPLKMSPHSLTCVTSSHWDRPYSREVAAFPLPFVKPENKFWPTIARIDDIYGDQHLVCTCPP 1004
BLAST of CX300614 vs. ExPASy Swiss-Prot
Match: GCSP_SHEB9 (Glycine dehydrogenase [decarboxylating] OS=Shewanella baltica (strain OS195) GN=gcvP PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 8.174e-17 Identity = 42/89 (47.19%), Postives = 61/89 (68.54%), Query Frame = 2 Query: 2 LDRYCDALISIREENAQIENGKADIHNNVLKGAPHPPSLLMGDTW-TKPNSRENAA*PASWLRFAKFWPATGRVDNVYGDRNLICTLLP 265 LDR+ DA++SIR E A++E+G+ + NN L APH + +M + T+P SRE A P++ +R KFWP R+D+VYGDRNL+C+ P Sbjct: 869 LDRFIDAMVSIRAEIAKVESGEWPVDNNPLHNAPHTMADIMDPEFDTRPYSREVAVFPSAAVRTNKFWPTVNRIDDVYGDRNLMCSCAP 957 The following BLAST results are available for this feature:
BLAST of CX300614 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 249
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300614 ID=CX300614; Name=CX300614; organism=Citrus clementina; type=EST; length=547bpback to top |