CX300625

Overview
NameCX300625
Unique NameCX300625
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length686
Libraries
Library NameType
SaltLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX300625 vs. ExPASy Swiss-Prot
Match: HPPA_BRUME (Pyrophosphate-energized proton pump OS=Brucella melitensis GN=hppA PE=3 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 1.666e-31
Identity = 37/81 (45.68%), Postives = 55/81 (67.90%), Query Frame = 1
Query:  421 VSGILMALFLNTAGGAWDNAKKFIETGALGG------KGSDTHKAAVTGDTVGDPFKDTAGPSLHVLIKMLATITLVMAPI 645
            ++G+ +A+ + + GGAWDNAKK  E G          KGS+ HKA+VTGDTVGDP+KDTAGP+++  IK+   + L++  +
Sbjct:  633 INGLFVAISMTSGGGAWDNAKKSFEDGFTDADGVKHMKGSEAHKASVTGDTVGDPYKDTAGPAVNPAIKITNIVALLLLAV 713          

HSP 2 Score: 75.0998 bits (183), Expect = 1.666e-31
Identity = 39/79 (49.37%), Postives = 54/79 (68.35%), Query Frame = 2
Query:  116 LFSYLVDGLC-SAVGKTAQEVVNEVRRQFIERPGIMEYKEKPDYARCVAIVASASLREMIKPGALAIISPLVIGLSFFG 349
            L  YL  G+  +AVG+    VV EVRRQF E+PGIM  KE+PDYAR V ++  A++REMI P  L +++P+V+   +FG
Sbjct:  534 LIPYLFGGMAMTAVGRAGGAVVQEVRRQFREKPGIMTGKERPDYARAVDLLTKAAIREMIIPSLLPVLAPIVV---YFG 609          
BLAST of CX300625 vs. ExPASy Swiss-Prot
Match: HPPA_CAUCR (Pyrophosphate-energized proton pump OS=Caulobacter crescentus GN=hppA PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 4.791e-31
Identity = 41/85 (48.24%), Postives = 59/85 (69.41%), Query Frame = 1
Query:  409 MFATVSGILMALFLNTAGGAWDNAKKFIE------TGALGGKGSDTHKAAVTGDTVGDPFKDTAGPSLHVLIKMLATITLVMAPI 645
            M   V+G+ +A+ + + GGAWDNAKK IE       G L  KG +THKAAVTGDTVGDP+KDT+GP+++ +IK+   + L++  +
Sbjct:  623 MGVIVTGLFVAISMTSGGGAWDNAKKVIEEGFTDKNGVLHKKGGETHKAAVTGDTVGDPYKDTSGPAVNPMIKITNIVALLLLAV 707          

HSP 2 Score: 67.3958 bits (163), Expect = 4.791e-31
Identity = 34/73 (46.58%), Postives = 49/73 (67.12%), Query Frame = 2
Query:  116 LFSYLVDGLC-SAVGKTAQEVVNEVRRQFIERPGIMEYKEKPDYARCVAIVASASLREMIKPGALAIISPLVI 331
            L  +L  GL  +AVG+ A+ VV EVRRQF + PGIM  + KP+Y + V I+  A++REMI P  L ++SP+ +
Sbjct:  529 LLPFLFGGLSMTAVGRAAESVVAEVRRQFRDNPGIMTGEVKPEYGKAVDILTKAAIREMIVPSLLPVVSPVAL 601          
BLAST of CX300625 vs. ExPASy Swiss-Prot
Match: HPPA_MYXXA (Pyrophosphate-energized proton pump (Fragment) OS=Myxococcus xanthus GN=hppA PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 6.318e-31
Identity = 46/77 (59.74%), Postives = 59/77 (76.62%), Query Frame = 1
Query:  421 VSGILMALFLNTAGGAWDNAKKFIETGALGG--KGSDTHKAAVTGDTVGDPFKDTAGPSLHVLIKMLATITLVMAPI 645
            V G  MAL++  AGGAWDNAKKFIE G L G  KGS  HKAAV GD VGDPFKDT+GP + +LIK+++ ++L++A +
Sbjct:  195 VVGATMALYMANAGGAWDNAKKFIEKGKLPGHAKGSAVHKAAVVGDMVGDPFKDTSGPGVAILIKVMSVVSLLVASL 271          

HSP 2 Score: 58.5362 bits (140), Expect = 6.318e-31
Identity = 27/62 (43.55%), Postives = 41/62 (66.13%), Query Frame = 2
Query:  149 AVGKTAQEVVNEVRRQFIERPGIMEYKEKPDYARCVAIVASASLREMIKPGALAIISPLVIG 334
            AVG+ A  +V E+ RQF E PG+ME K  PD  + V I   ++L+EM+ PG +A+ +P ++G
Sbjct:  117 AVGRAAGAIVEEIGRQFREIPGLMELKADPDPKKIVDIATKSALQEMVFPGIIAVAAPPLVG 178          
BLAST of CX300625 vs. ExPASy Swiss-Prot
Match: HPPA1_MYCDI (Pyrophosphate-energized proton pump 1 (Fragment) OS=Mycoplana dimorpha GN=hppA1 PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 6.337e-31
Identity = 37/70 (52.86%), Postives = 51/70 (72.86%), Query Frame = 1
Query:  421 VSGILMALFLNTAGGAWDNAKKFIETGALGG------KGSDTHKAAVTGDTVGDPFKDTAGPSLHVLIKM 612
            V+G+ +A+ + + GGAWDNAKK  E G +        KGS+ HKA+VTGDTVGDP+KDTAGP+++  IK+
Sbjct:  156 VNGLFVAISMTSGGGAWDNAKKSFEDGFVDKDGQRHMKGSEAHKASVTGDTVGDPYKDTAGPAVNPAIKI 225          

HSP 2 Score: 75.485 bits (184), Expect = 6.337e-31
Identity = 38/79 (48.10%), Postives = 55/79 (69.62%), Query Frame = 2
Query:  116 LFSYLVDGLC-SAVGKTAQEVVNEVRRQFIERPGIMEYKEKPDYARCVAIVASASLREMIKPGALAIISPLVIGLSFFG 349
            L  YL  G+  +AVG+ A  +V EVRRQF E+PGIM+ K+KP+Y R V ++  A++REMI P  L +++PLV+   +FG
Sbjct:   57 LIPYLFGGIAMTAVGRAAGSIVEEVRRQFKEKPGIMQGKDKPNYGRAVDLLTKAAIREMIVPSLLPVLAPLVV---YFG 132          
BLAST of CX300625 vs. ExPASy Swiss-Prot
Match: HPPA2_RHOPA (Pyrophosphate-energized proton pump OS=Rhodopseudomonas palustris GN=hppA PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 8.122e-31
Identity = 45/85 (52.94%), Postives = 60/85 (70.59%), Query Frame = 1
Query:  409 MFATVSGILMALFLNTAGGAWDNAKKFIE------TGALGGKGSDTHKAAVTGDTVGDPFKDTAGPSLHVLIKMLATITLVMAPI 645
            M   V+GI + + + T GGAWDNAKK IE       G L  KGS+ HKAAVTGDTVGDP+KDTAGP+++ LIK++  + L++ P+
Sbjct:  598 MGTIVTGIFVGISMCTGGGAWDNAKKLIEEGFTDANGVLHKKGSEAHKAAVTGDTVGDPYKDTAGPAVNPLIKIINIVALLIVPL 682          

HSP 2 Score: 61.2326 bits (147), Expect = 8.122e-31
Identity = 31/75 (41.33%), Postives = 48/75 (64.00%), Query Frame = 2
Query:  116 LFSYLVDGLC-SAVGKTAQEVVNEVRRQFIERPGIMEYKEKPDYARCVAIVASASLREMIKPGALAIISPLVIGL 337
            L  YL   +   AVG+ A  VV EVRRQF +  GIME   KP+Y   V ++ +A+++EMI P  L +++P+++G+
Sbjct:  512 LIPYLFASMAMEAVGRAAGSVVVEVRRQFRDIKGIMEGTAKPEYGTAVDMLTTAAIKEMIVPSLLPVVAPILVGM 586          
BLAST of CX300625 vs. ExPASy Swiss-Prot
Match: HPPA_RHILO (Pyrophosphate-energized proton pump OS=Rhizobium loti GN=hppA PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.138e-29
Identity = 38/81 (46.91%), Postives = 55/81 (67.90%), Query Frame = 1
Query:  421 VSGILMALFLNTAGGAWDNAKKFIETGALGG------KGSDTHKAAVTGDTVGDPFKDTAGPSLHVLIKMLATITLVMAPI 645
            V+G+ +A+ + + GGAWDNAKK  E G          KGS+ HKA+VTGDTVGDP+KDTAGP+++  IK+   + L++  +
Sbjct:  629 VNGLFVAISMTSGGGAWDNAKKSFEDGFTDKDGVKHLKGSEAHKASVTGDTVGDPYKDTAGPAVNPAIKITNIVALLLLAV 709          

HSP 2 Score: 69.3218 bits (168), Expect = 1.138e-29
Identity = 37/79 (46.84%), Postives = 52/79 (65.82%), Query Frame = 2
Query:  116 LFSYLVDGLC-SAVGKTAQEVVNEVRRQFIERPGIMEYKEKPDYARCVAIVASASLREMIKPGALAIISPLVIGLSFFG 349
            L  YL  G+  +AVG+ A  +V EVR+QF E PGIM    KP+YAR V ++  A++REMI P  L +++PLV+   +FG
Sbjct:  530 LIPYLFGGIAMTAVGRAAGAIVEEVRKQFREDPGIMAGTSKPNYARAVDLLTKAAIREMIIPSLLPVLAPLVV---YFG 605          
BLAST of CX300625 vs. ExPASy Swiss-Prot
Match: HPPA_HELCL (Pyrophosphate-energized proton pump (Fragment) OS=Heliobacterium chlorum GN=hppA PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.791e-21
Identity = 40/65 (61.54%), Postives = 50/65 (76.92%), Query Frame = 2
Query:  149 AVGKTAQEVVNEVRRQFIERPGIMEYKEKPDYARCVAIVASASLREMIKPGALAIISPLVIGLSF 343
            AVGK A E++ EVRRQF E PG+ME K KPDYARCV I   A++R+MI PG LA+I+PL++G  F
Sbjct:  100 AVGKAAFEMIGEVRRQFREIPGLMEGKAKPDYARCVDISTRAAIRQMIAPGLLAVITPLIVGFGF 164          

HSP 2 Score: 35.039 bits (79), Expect = 5.791e-21
Identity = 13/21 (61.90%), Postives = 19/21 (90.48%), Query Frame = 1
Query:  418 TVSGILMALFLNTAGGAWDNA 480
            TV+G+L+A+F+  AGGAWD+A
Sbjct:  177 TVAGVLLAIFMANAGGAWDHA 197          
BLAST of CX300625 vs. ExPASy Swiss-Prot
Match: HPPA1_RHILT (Pyrophosphate-energized proton pump 1 (Fragment) OS=Rhizobium leguminosarum bv. trifolii GN=hppA1 PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.276e-13
Identity = 39/79 (49.37%), Postives = 53/79 (67.09%), Query Frame = 2
Query:  116 LFSYLVDGLC-SAVGKTAQEVVNEVRRQFIERPGIMEYKEKPDYARCVAIVASASLREMIKPGALAIISPLVIGLSFFG 349
            L  YL  G+  +AVGK A  +V EVRRQF E+PGIM   EKPDY R V ++  A++REM+ P  L +++PLV+   +FG
Sbjct:   55 LIPYLFGGIAMTAVGKAASAIVEEVRRQFREKPGIMAGTEKPDYGRAVDLLTKAAIREMVIPSLLPVLAPLVV---YFG 130          
BLAST of CX300625 vs. ExPASy Swiss-Prot
Match: HPPA_CHLTE (Pyrophosphate-energized proton pump OS=Chlorobium tepidum GN=hppA PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.882e-13
Identity = 36/69 (52.17%), Postives = 48/69 (69.57%), Query Frame = 1
Query:  427 GILMALFLNTAGGAWDNAKKFIETGALGGKGSDTHKAAVTGDTVGDPFKDTAGPSLHVLIKMLATITLV 633
            G+  A+F+  AGGAWDNAKK +ET  L  KG++ H A+V GDTVGDPFKDT+  +L+ +IK      L+
Sbjct:  641 GLYQAIFMANAGGAWDNAKKVVET-ELHAKGTELHDASVVGDTVGDPFKDTSSVALNPIIKFTTLFGLL 708          
BLAST of CX300625 vs. ExPASy Swiss-Prot
Match: HPPA_RHIRD (Pyrophosphate-energized proton pump (Fragment) OS=Rhizobium radiobacter GN=hppA PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.622e-13
Identity = 35/62 (56.45%), Postives = 46/62 (74.19%), Query Frame = 2
Query:  149 AVGKTAQEVVNEVRRQFIERPGIMEYKEKPDYARCVAIVASASLREMIKPGALAIISPLVIG 334
            AVGK A E++ EVRRQF E PGIME   +PDYA+CV I   A++REM+ PG  A+ +PL++G
Sbjct:  100 AVGKAAFEMIEEVRRQFREIPGIMEGTGRPDYAKCVDISTKAAIREMMLPGVFAVGAPLIVG 161          
The following BLAST results are available for this feature:
BLAST of CX300625 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
HPPA_BRUME1.666e-3145.68Pyrophosphate-energized proton pump OS=Brucella me... [more]
HPPA_CAUCR4.791e-3148.24Pyrophosphate-energized proton pump OS=Caulobacter... [more]
HPPA_MYXXA6.318e-3159.74Pyrophosphate-energized proton pump (Fragment) OS=... [more]
HPPA1_MYCDI6.337e-3152.86Pyrophosphate-energized proton pump 1 (Fragment) O... [more]
HPPA2_RHOPA8.122e-3152.94Pyrophosphate-energized proton pump OS=Rhodopseudo... [more]
HPPA_RHILO1.138e-2946.91Pyrophosphate-energized proton pump OS=Rhizobium l... [more]
HPPA_HELCL5.791e-2161.54Pyrophosphate-energized proton pump (Fragment) OS=... [more]
HPPA1_RHILT2.276e-1349.37Pyrophosphate-energized proton pump 1 (Fragment) O... [more]
HPPA_CHLTE3.882e-1352.17Pyrophosphate-energized proton pump OS=Chlorobium ... [more]
HPPA_RHIRD6.622e-1356.45Pyrophosphate-energized proton pump (Fragment) OS=... [more]

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Properties
Property NameValue
Genbank descriptionC07012D06SK SaltLeaf1 Citrus clementina cDNA clone C07012D06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300625 ID=CX300625; Name=CX300625; organism=Citrus clementina; type=EST; length=686bp
TTTCTTCTGTTCAGTGCTTATATGGATGAAGTTGCTACATTTGCACAGGA
ACCTTTTAAACAGGTGGATATTGCCATTCCGGAAGTTTTCGTTGGAGGAC
TGTTGGGATCCATGCTTATTTTCTTACTTAGTGGATGGGCTTTGCTCTGC
AGTTGGCAAAACTGCTCAGGAGGTTGTTAATGAGGTTAGAAGACAGTTCA
TTGAGAGGCCTGGTATCATGGAGTACAAGGAGAAGCCAGACTATGCTCGC
TGTGTCGCAATTGTGGCATCTGCATCTTTGCGGGAGATGATAAAGCCTGG
TGCCCTCGCTATCATATCACCATTAGTGATTGGTCTTTCTTTTTTCGGAT
TTTGGGATACTATACAGGACATGCGCTACTAGGGGCCAAAGTGGTGGCTG
CTTTACTGATGTTTGCAACTGTCTCTGGTATTCTTATGGCTCTTTTCCTG
AACACAGCCGGAGGAGCATGGGATAATGCAAAGAAGTTCATAGAGACTGG
GGCTCTTGGAGGCAAAGGTAGTGATACTCATAAAGCAGCGGTCACAGGAG
ATACTGTGGGCGATCCATTCAAAGACACAGCCGGACCTTCACTTCATGTT
CTCATTAAAATGCTTGCGACCATTACGCTTGTCATGGCTCCCATCTTCCT
GTGAGAGAGTTGTTAATATCTATCGCAGTTTTTCCC
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