CX300632

Overview
NameCX300632
Unique NameCX300632
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length593
Libraries
Library NameType
SaltLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX300632 vs. ExPASy Swiss-Prot
Match: HPPA_XANAC (Pyrophosphate-energized proton pump OS=Xanthomonas axonopodis pv. citri GN=hppA PE=3 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 2.629e-38
Identity = 81/176 (46.02%), Postives = 112/176 (63.64%), Query Frame = 3
Query:    3 FLFSGWACSAVGKTAQEVVNEVRRQFIERPGIMEYKEKPDYARCVAIVASASLREMIKPGALAIISPLVIGLLF--RILGYYTGHXXXXXXXXXXXXMFATVSGILMALFLNTAGGAWDNAKKFIETGALGGKGSDTHKAAVTGDTVGDPFKDTAGPSLHVLIKMLATITLVMAPI 524
            +LF   A  AVG+ A  VV EVRRQF E PGIM    KP Y R V ++  +++ EMI P  L ++ P+++GLL   R LG                 +   V+G+ +A+ + T GGAWDNAKK+IE G  GGKGS+ HKAA+TGDTVGDP+KDTAGP+++ LIK++  + L++ P+
Sbjct:  513 YLFGAMAMEAVGRAAGAVVEEVRRQFRELPGIMAGTAKPQYDRAVDMLTRSAIGEMIVPSLLPVVVPIIVGLLLGPRALG--------------GLLIGTIVTGLFLAISMTTGGGAWDNAKKYIEDGHFGGKGSEAHKAAITGDTVGDPYKDTAGPAINPLIKIINIVALLLVPL 674          
BLAST of CX300632 vs. ExPASy Swiss-Prot
Match: HPPA_RHORT (Pyrophosphate-energized proton pump OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=hppA PE=1 SV=3)

HSP 1 Score: 157.147 bits (396), Expect = 5.858e-38
Identity = 81/174 (46.55%), Postives = 112/174 (64.37%), Query Frame = 3
Query:    3 FLFSGWACSAVGKTAQEVVNEVRRQFIERPGIMEYKEKPDYARCVAIVASASLREMIKPGALAIISPLVIGLLFRILGYYTGHXXXXXXXXXXXXMFATVSGILMALFLNTAGGAWDNAKKFIETGALGGKGSDTHKAAVTGDTVGDPFKDTAGPSLHVLIKMLATITLVMAPI 524
            +LF     +AVG+ A  VV EVRRQF E PGIME   KP+Y RCV ++  A+++EMI P  L +++P+V  L F ILG                 +   V+G+ +A+ +   GGAWDNAKK+IE G  GGKGS+ HKAAVTGDTVGDP+KDTAGP+++ +IK+   + L++  +
Sbjct:  530 YLFGSMGMTAVGRAAGSVVEEVRRQFREIPGIMEGTAKPEYGRCVDMLTKAAIKEMIIPSLLPVLAPIV--LYFVILGI--ADKSAAFSALGAMLLGVIVTGLFVAISMTAGGGAWDNAKKYIEDGHYGGKGSEAHKAAVTGDTVGDPYKDTAGPAVNPMIKITNIVALLLLAV 699          
BLAST of CX300632 vs. ExPASy Swiss-Prot
Match: HPPA1_RHOPA (Pyrophosphate-energized proton pump OS=Rhodopseudomonas palustris GN=hppA PE=3 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 9.991e-38
Identity = 77/175 (44.00%), Postives = 113/175 (64.57%), Query Frame = 3
Query:    3 FLFSGWACSAVGKTAQEVVNEVRRQFIERPGIMEYKEKPDYARCVAIVASASLREMIKPGALAIISPLVIGL-LFRILGYYTGHXXXXXXXXXXXXMFATVSGILMALFLNTAGGAWDNAKKFIETGALGGKGSDTHKAAVTGDTVGDPFKDTAGPSLHVLIKMLATITLVMAPI 524
            +LF     +AVG+ A  +V EVRRQF E+PGIM+  +KPDY + V ++  A+++EMI P  L ++SP+ +   ++ I G                 +   V+G+ +A+ + + GGAWDNAKK+IE G  GGKGSD HKAAVTGDTVGDP+KDTAGP+++ +IK+   + L++  I
Sbjct:  529 YLFGAMGMTAVGRAAGAIVEEVRRQFREKPGIMKGTDKPDYGKAVDLLTKAAIKEMIIPSLLPVLSPIFVYFAIYAIAGGGAAGKSAAFSAVGAMLLGVIVTGLFVAISMTSGGGAWDNAKKYIEDGHHGGKGSDAHKAAVTGDTVGDPYKDTAGPAVNPMIKITNIVALLLLAI 703          
BLAST of CX300632 vs. ExPASy Swiss-Prot
Match: HPPA_PYRAE (Pyrophosphate-energized proton pump OS=Pyrobaculum aerophilum GN=hppA PE=1 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 4.959e-37
Identity = 86/176 (48.86%), Postives = 112/176 (63.64%), Query Frame = 3
Query:    3 FLFSGWACSAVGKTAQEVVNEVRRQFIERPGIMEYKEKPDYARCVAIVASASLREMIKPGALAIISPLVIGLLFRILGYYTGHXXXXXXXXXXXXMFATVSGILMALFLNTAGGAWDNAKKFIETGALGGKGSDTHKAAVTGDTVGDPFKDTAGPSLHVLIKMLATITLVMAPIFL 530
            + FS     AVG+TA E+V E+RRQF E+PGI+E+KE+PDYAR V I    +L E + PG  AI+ PL+ GLL   LG+                M A V+G+  AL +  AGGAWDNAKK+IE   L  K ++ HKAAV GDTVGDP KDT GPSL+ LIK+L T+++V   + +
Sbjct:  544 YFFSSRTLEAVGRTAMEIVEEIRRQFREKPGILEWKEQPDYARVVDIATRRALGEFLIPGLAAIVLPLITGLL---LGW---------NALAGLIMGAIVAGVPRALLMANAGGAWDNAKKYIEIQGL--KKTEMHKAAVIGDTVGDPMKDTVGPSLNPLIKVLNTLSVVFTYVIV 705          
BLAST of CX300632 vs. ExPASy Swiss-Prot
Match: HPPA_CHLAA (Pyrophosphate-energized proton pump OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN=hppA PE=3 SV=2)

HSP 1 Score: 154.066 bits (388), Expect = 4.959e-37
Identity = 83/177 (46.89%), Postives = 113/177 (63.84%), Query Frame = 3
Query:    3 FLFSGWACSAVGKTAQEVVNEVRRQFIERPGIMEYKEKPDYARCVAIVASASLREMIKPGALAIISPLVIGLLFRIL---GYYTGHXXXXXXXXXXXXMFATVSGILMALFLNTAGGAWDNAKKFIETGALGGKGSDTHKAAVTGDTVGDPFKDTAGPSLHVLIKMLATITLVMAPI 524
            FLFS     AV + A ++VNEVRRQF   PG+ME K +PDYAR V I  +A+ +E+I  G +A++ P+++G    +    G+  G                 ++G LMA+F   AGGAWDNAKK+IE G  GGK S+ HKAAV GDTVGDP KDTAGP+L+ +IK++  + L++API
Sbjct:  568 FLFSALTIRAVSRAAAQIVNEVRRQF-RIPGLMEGKVQPDYARAVQISTTAAQKELISLGLIAVMVPIIVGFTLGVEALGGFLAG---------------IILTGQLMAVFQANAGGAWDNAKKYIEEGNFGGKHSEPHKAAVVGDTVGDPLKDTAGPALNPMIKVINLVALIIAPI 728          
BLAST of CX300632 vs. ExPASy Swiss-Prot
Match: HPPA_THEMA (Pyrophosphate-energized proton pump OS=Thermotoga maritima GN=hppA PE=1 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 3.554e-35
Identity = 77/177 (43.50%), Postives = 110/177 (62.15%), Query Frame = 3
Query:    3 FLFSGWACSAVGKTAQEVVNEVRRQFIERPGIMEYKEKPDYARCVAIVASASLREMIKPGALAIISPLVIGLLFRILGYYTGHXXXXXXXXXXXXMFATVSGILMALFLNTAGGAWDNAKKFIETGALG--GKGSDTHKAAVTGDTVGDPFKDTAGPSLHVLIKMLATITLVMAPIF 527
            + FSG+  SAV K A ++V+E+RRQ  E PG++E K KPDY RC+ I +  +L++M  P  +AI++PLV G L                      +   +SG ++A+    +GGAWDNAKK++E G L   GKGS+ HKA V GDTVGDP KDT GPSL +LIK+++ ++++   IF
Sbjct:  556 YYFSGYLISAVTKAAMKMVDEIRRQAREIPGLLEGKAKPDYNRCIEITSDNALKQMGYPAFIAILTPLVTGFLL------------GAEFVGGVLIGTVLSGAMLAILTANSGGAWDNAKKYLEAGNLEGYGKGSEPHKALVIGDTVGDPLKDTVGPSLDILIKIMSVVSVIAVSIF 720          
BLAST of CX300632 vs. ExPASy Swiss-Prot
Match: HPPA_AGRT5 (Pyrophosphate-energized proton pump OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=hppA PE=1 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.034e-34
Identity = 77/180 (42.78%), Postives = 112/180 (62.22%), Query Frame = 3
Query:    3 FLFSGWACSAVGKTAQEVVNEVRRQFIERPGIMEYKEKPDYARCVAIVASASLREMIKPGALAIISPLVIGLLFRILGYYTGHXXXXXXXXXXXXMFATVSGILMALFLNTAGGAWDNAKKFIETGALGG------KGSDTHKAAVTGDTVGDPFKDTAGPSLHVLIKMLATITLVMAPI 524
            +LF G A +AVGK A  +V EVRRQF E+PGIM   EKPDY R V ++  A++REM+ P  L +++PLV+   F +L   +G             +   ++G+ +A+ + + GGAWDNAKK  E G +        KGS+ HKA+VTGDTVGDP+KDTAGP+++  IK+   + L++  +
Sbjct:  535 YLFGGIAMTAVGKAASAIVEEVRRQFREKPGIMAGTEKPDYGRAVDLLTKAAIREMVIPSLLPVLAPLVV--YFGVL-LISGSKASAFAALGASLLGVIINGLFVAISMTSGGGAWDNAKKSFEDGFIDKDGVRHVKGSEAHKASVTGDTVGDPYKDTAGPAVNPAIKITNIVALLLLAV 711          
BLAST of CX300632 vs. ExPASy Swiss-Prot
Match: HPPA_OCHA4 (Pyrophosphate-energized proton pump OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=hppA PE=3 SV=2)

HSP 1 Score: 145.976 bits (367), Expect = 1.350e-34
Identity = 78/180 (43.33%), Postives = 112/180 (62.22%), Query Frame = 3
Query:    3 FLFSGWACSAVGKTAQEVVNEVRRQFIERPGIMEYKEKPDYARCVAIVASASLREMIKPGALAIISPLVIGLLFRILGYYTGHXXXXXXXXXXXXMFATVSGILMALFLNTAGGAWDNAKKFIETGALGG------KGSDTHKAAVTGDTVGDPFKDTAGPSLHVLIKMLATITLVMAPI 524
            +LF G A +AVG+    VV EVRRQF E+PGIM  KE+PDYAR V ++  A++REMI P  L +++P+V+   F +L   +G             +   V+G+ +A+ + + GGAWDNAKK  E G          KGS+ HKA+VTGDTVGDP+KDTAGP+++  IK+   + L++  +
Sbjct:  537 YLFGGMAMTAVGRAGGAVVQEVRRQFREKPGIMTGKERPDYARAVDLLTRAAIREMIIPSLLPVLAPIVV--YFGVL-LISGSKAAAFAALGASLLGVIVNGLFVAISMTSGGGAWDNAKKSFEDGFTDADGVKHLKGSEAHKASVTGDTVGDPYKDTAGPAVNPAIKITNIVALLLLAV 713          
BLAST of CX300632 vs. ExPASy Swiss-Prot
Match: HPPA_BRUSU (Pyrophosphate-energized proton pump OS=Brucella suis GN=hppA PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.350e-34
Identity = 77/180 (42.78%), Postives = 112/180 (62.22%), Query Frame = 3
Query:    3 FLFSGWACSAVGKTAQEVVNEVRRQFIERPGIMEYKEKPDYARCVAIVASASLREMIKPGALAIISPLVIGLLFRILGYYTGHXXXXXXXXXXXXMFATVSGILMALFLNTAGGAWDNAKKFIETGALGG------KGSDTHKAAVTGDTVGDPFKDTAGPSLHVLIKMLATITLVMAPI 524
            +LF G A +AVG+    VV EVRRQF E+PGIM  KE+PDYAR V ++  A++REMI P  L +++P+V+   F +L   +G             +   ++G+ +A+ + + GGAWDNAKK  E G          KGS+ HKA+VTGDTVGDP+KDTAGP+++  IK+   + L++  +
Sbjct:  537 YLFGGMAMTAVGRAGGAVVQEVRRQFREKPGIMTGKERPDYARAVDLLTKAAIREMIIPSLLPVLAPIVV--YFGVL-LISGSKAAAFAALGASLLGVIINGLFVAISMTSGGGAWDNAKKSFEDGFTDADGVKHMKGSEAHKASVTGDTVGDPYKDTAGPAVNPAIKITNIVALLLLAV 713          
BLAST of CX300632 vs. ExPASy Swiss-Prot
Match: HPPA_BRUME (Pyrophosphate-energized proton pump OS=Brucella melitensis GN=hppA PE=3 SV=2)

HSP 1 Score: 145.976 bits (367), Expect = 1.350e-34
Identity = 77/180 (42.78%), Postives = 112/180 (62.22%), Query Frame = 3
Query:    3 FLFSGWACSAVGKTAQEVVNEVRRQFIERPGIMEYKEKPDYARCVAIVASASLREMIKPGALAIISPLVIGLLFRILGYYTGHXXXXXXXXXXXXMFATVSGILMALFLNTAGGAWDNAKKFIETGALGG------KGSDTHKAAVTGDTVGDPFKDTAGPSLHVLIKMLATITLVMAPI 524
            +LF G A +AVG+    VV EVRRQF E+PGIM  KE+PDYAR V ++  A++REMI P  L +++P+V+   F +L   +G             +   ++G+ +A+ + + GGAWDNAKK  E G          KGS+ HKA+VTGDTVGDP+KDTAGP+++  IK+   + L++  +
Sbjct:  537 YLFGGMAMTAVGRAGGAVVQEVRRQFREKPGIMTGKERPDYARAVDLLTKAAIREMIIPSLLPVLAPIVV--YFGVL-LISGSKAAAFAALGASLLGVIINGLFVAISMTSGGGAWDNAKKSFEDGFTDADGVKHMKGSEAHKASVTGDTVGDPYKDTAGPAVNPAIKITNIVALLLLAV 713          
The following BLAST results are available for this feature:
BLAST of CX300632 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
HPPA_XANAC2.629e-3846.02Pyrophosphate-energized proton pump OS=Xanthomonas... [more]
HPPA_RHORT5.858e-3846.55Pyrophosphate-energized proton pump OS=Rhodospiril... [more]
HPPA1_RHOPA9.991e-3844.00Pyrophosphate-energized proton pump OS=Rhodopseudo... [more]
HPPA_PYRAE4.959e-3748.86Pyrophosphate-energized proton pump OS=Pyrobaculum... [more]
HPPA_CHLAA4.959e-3746.89Pyrophosphate-energized proton pump OS=Chloroflexu... [more]
HPPA_THEMA3.554e-3543.50Pyrophosphate-energized proton pump OS=Thermotoga ... [more]
HPPA_AGRT51.034e-3442.78Pyrophosphate-energized proton pump OS=Agrobacteri... [more]
HPPA_OCHA41.350e-3443.33Pyrophosphate-energized proton pump OS=Ochrobactru... [more]
HPPA_BRUSU1.350e-3442.78Pyrophosphate-energized proton pump OS=Brucella su... [more]
HPPA_BRUME1.350e-3442.78Pyrophosphate-energized proton pump OS=Brucella me... [more]

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Properties
Property NameValue
Genbank descriptionC07012E02SK SaltLeaf1 Citrus clementina cDNA clone C07012E02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300632 ID=CX300632; Name=CX300632; organism=Citrus clementina; type=EST; length=593bp
TTTTCTTATTTAGTGGATGGGCTTGCTCTGCAGTTGGCAAAACTGCTCAG
GAGGTTGTTAATGAGGTTAGAAGACAGTTCATTGAGAGGCCTGGTATCAT
GGAGTACAAGGAGAAGCCAGACTATGCTCGCTGTGTCGCAATTGTGGCAT
CTGCATCTTTGCGGGAGATGATAAAGCCTGGTGCCCTCGCTATCATATCA
CCATTAGTGATTGGTCTTCTTTTTCGGATTTTGGGATACTATACAGGACA
TGCGCTACTAGGGGCCAAAGTGGTGGCTGCTTTACTGATGTTTGCAACTG
TCTCTGGTATTCTTATGGCTCTTTTCCTGAACACAGCCGGAGGAGCATGG
GATAATGCAAAGAAGTTCATAGAGACTGGGGCTCTTGGAGGCAAAGGTAG
TGATACTCATAAAGCAGCGGTCACAGGAGATACTGTGGGCGATCCATTCA
AAGACACAGCCGGACCTTCACTTCATGTTCTCATTAAAATGCTTGCGACC
ATAACGCTTGTCATGGCTCCCATCTTCCTGTGAGAGAGTTGTTAATATCT
ATCGCAGTTTTCCCAGAACATACAAGCACCCATTACCGTTGAA
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