CX300632

Overview
NameCX300632
Unique NameCX300632
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length593
Libraries
Library NameType
SaltLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX300632 vs. ExPASy Swiss-Prot
Match: HPPA_RHIME (Pyrophosphate-energized proton pump OS=Rhizobium meliloti GN=hppA PE=3 SV=2)

HSP 1 Score: 145.591 bits (366), Expect = 1.764e-34
Identity = 77/180 (42.78%), Postives = 113/180 (62.78%), Query Frame = 3
Query:    3 FLFSGWACSAVGKTAQEVVNEVRRQFIERPGIMEYKEKPDYARCVAIVASASLREMIKPGALAIISPLVIGLLFRILGYYTGHXXXXXXXXXXXXMFATVSGILMALFLNTAGGAWDNAKKFIETGALGG------KGSDTHKAAVTGDTVGDPFKDTAGPSLHVLIKMLATITLVMAPI 524
            +LF G A +AVG+    VV EVRRQF E+PGIME K++PDY R V ++  A++REMI P  L +++P+V+   F +L   +G             +   V+G+ +A+ + + GGAWDNAKK  E G +        KGS+ HKA+VTGDTVGDP+KDTAGP+++  IK+   + L++  +
Sbjct:  533 YLFGGIAMTAVGRAGSAVVEEVRRQFKEKPGIMEGKDRPDYGRAVDMLTKAAIREMIIPSLLPVLAPIVV--YFGVL-LISGSKASAFAALGASLLGVIVNGLFVAISMTSGGGAWDNAKKSFEDGFVDRNGTRHMKGSEAHKASVTGDTVGDPYKDTAGPAVNPAIKITNIVALLLLAV 709          
BLAST of CX300632 vs. ExPASy Swiss-Prot
Match: HPPA_CAUCR (Pyrophosphate-energized proton pump OS=Caulobacter crescentus GN=hppA PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 3.008e-34
Identity = 78/180 (43.33%), Postives = 112/180 (62.22%), Query Frame = 3
Query:    3 FLFSGWACSAVGKTAQEVVNEVRRQFIERPGIMEYKEKPDYARCVAIVASASLREMIKPGALAIISPLVIGLLFRILGYYTGHXXXXXXXXXXXXMFATVSGILMALFLNTAGGAWDNAKKFIE------TGALGGKGSDTHKAAVTGDTVGDPFKDTAGPSLHVLIKMLATITLVMAPI 524
            FLF G + +AVG+ A+ VV EVRRQF + PGIM  + KP+Y + V I+  A++REMI P  L ++SP+    LF ++    G             M   V+G+ +A+ + + GGAWDNAKK IE       G L  KG +THKAAVTGDTVGDP+KDT+GP+++ +IK+   + L++  +
Sbjct:  532 FLFGGLSMTAVGRAAESVVAEVRRQFRDNPGIMTGEVKPEYGKAVDILTKAAIREMIVPSLLPVVSPVA---LFFVIQAIAG-KVDAFAALGAMLMGVIVTGLFVAISMTSGGGAWDNAKKVIEEGFTDKNGVLHKKGGETHKAAVTGDTVGDPYKDTSGPAVNPMIKITNIVALLLLAV 707          
BLAST of CX300632 vs. ExPASy Swiss-Prot
Match: HPPA2_RHOPA (Pyrophosphate-energized proton pump OS=Rhodopseudomonas palustris GN=hppA PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 6.702e-34
Identity = 77/180 (42.78%), Postives = 110/180 (61.11%), Query Frame = 3
Query:    3 FLFSGWACSAVGKTAQEVVNEVRRQFIERPGIMEYKEKPDYARCVAIVASASLREMIKPGALAIISPLVIGLLFRILGYYTGHXXXXXXXXXXXXMFATVSGILMALFLNTAGGAWDNAKKFIE------TGALGGKGSDTHKAAVTGDTVGDPFKDTAGPSLHVLIKMLATITLVMAPI 524
            +LF+  A  AVG+ A  VV EVRRQF +  GIME   KP+Y   V ++ +A+++EMI P  L +++P+++G+L                      M   V+GI + + + T GGAWDNAKK IE       G L  KGS+ HKAAVTGDTVGDP+KDTAGP+++ LIK++  + L++ P+
Sbjct:  515 YLFASMAMEAVGRAAGSVVVEVRRQFRDIKGIMEGTAKPEYGTAVDMLTTAAIKEMIVPSLLPVVAPILVGMLL------------GPAALGGLLMGTIVTGIFVGISMCTGGGAWDNAKKLIEEGFTDANGVLHKKGSEAHKAAVTGDTVGDPYKDTAGPAVNPLIKIINIVALLIVPL 682          
BLAST of CX300632 vs. ExPASy Swiss-Prot
Match: HPPA1_MYCDI (Pyrophosphate-energized proton pump 1 (Fragment) OS=Mycoplana dimorpha GN=hppA1 PE=3 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 8.753e-34
Identity = 76/169 (44.97%), Postives = 109/169 (64.50%), Query Frame = 3
Query:    3 FLFSGWACSAVGKTAQEVVNEVRRQFIERPGIMEYKEKPDYARCVAIVASASLREMIKPGALAIISPLVIGLLFRILGYYTGHXXXXXXXXXXXXMFATVSGILMALFLNTAGGAWDNAKKFIETGALGG------KGSDTHKAAVTGDTVGDPFKDTAGPSLHVLIKM 491
            +LF G A +AVG+ A  +V EVRRQF E+PGIM+ K+KP+Y R V ++  A++REMI P  L +++PLV+   F +L   +G             +   V+G+ +A+ + + GGAWDNAKK  E G +        KGS+ HKA+VTGDTVGDP+KDTAGP+++  IK+
Sbjct:   60 YLFGGIAMTAVGRAAGSIVEEVRRQFKEKPGIMQGKDKPNYGRAVDLLTKAAIREMIVPSLLPVLAPLVV--YFGVL-LISGSKASAFAALGASLLGVIVNGLFVAISMTSGGGAWDNAKKSFEDGFVDKDGQRHMKGSEAHKASVTGDTVGDPYKDTAGPAVNPAIKI 225          
BLAST of CX300632 vs. ExPASy Swiss-Prot
Match: HPPA_MYXXA (Pyrophosphate-energized proton pump (Fragment) OS=Myxococcus xanthus GN=hppA PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 9.677e-33
Identity = 78/179 (43.58%), Postives = 107/179 (59.78%), Query Frame = 3
Query:    3 FLFSGWACSAVGKTAQEVVNEVRRQFIERPGIMEYKEKPDYARCVAIVASASLREMIKPGALAIISPLVIGLLF---RILGYYTGHXXXXXXXXXXXXMFATVSGILMALFLNTAGGAWDNAKKFIETGALGG--KGSDTHKAAVTGDTVGDPFKDTAGPSLHVLIKMLATITLVMAPI 524
            FL       AVG+ A  +V E+ RQF E PG+ME K  PD  + V I   ++L+EM+ PG +A+ +P ++G L     + G   G               + V G  MAL++  AGGAWDNAKKFIE G L G  KGS  HKAAV GD VGDPFKDT+GP + +LIK+++ ++L++A +
Sbjct:  108 FLVGASTMLAVGRAAGAIVEEIGRQFREIPGLMELKADPDPKKIVDIATKSALQEMVFPGIIAVAAPPLVGYLLGPGALAGLLAG---------------SLVVGATMALYMANAGGAWDNAKKFIEKGKLPGHAKGSAVHKAAVVGDMVGDPFKDTSGPGVAILIKVMSVVSLLVASL 271          
BLAST of CX300632 vs. ExPASy Swiss-Prot
Match: HPPA_RHILO (Pyrophosphate-energized proton pump OS=Rhizobium loti GN=hppA PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 1.651e-32
Identity = 76/180 (42.22%), Postives = 110/180 (61.11%), Query Frame = 3
Query:    3 FLFSGWACSAVGKTAQEVVNEVRRQFIERPGIMEYKEKPDYARCVAIVASASLREMIKPGALAIISPLVIGLLFRILGYYTGHXXXXXXXXXXXXMFATVSGILMALFLNTAGGAWDNAKKFIETGALGG------KGSDTHKAAVTGDTVGDPFKDTAGPSLHVLIKMLATITLVMAPI 524
            +LF G A +AVG+ A  +V EVR+QF E PGIM    KP+YAR V ++  A++REMI P  L +++PLV+   F +L   +G             +   V+G+ +A+ + + GGAWDNAKK  E G          KGS+ HKA+VTGDTVGDP+KDTAGP+++  IK+   + L++  +
Sbjct:  533 YLFGGIAMTAVGRAAGAIVEEVRKQFREDPGIMAGTSKPNYARAVDLLTKAAIREMIIPSLLPVLAPLVV--YFGVL-LISGSKASAFAALGASLLGVIVNGLFVAISMTSGGGAWDNAKKSFEDGFTDKDGVKHLKGSEAHKASVTGDTVGDPYKDTAGPAVNPAIKITNIVALLLLAV 709          
BLAST of CX300632 vs. ExPASy Swiss-Prot
Match: HPPA_HELCL (Pyrophosphate-energized proton pump (Fragment) OS=Heliobacterium chlorum GN=hppA PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 2.389e-23
Identity = 59/122 (48.36%), Postives = 77/122 (63.11%), Query Frame = 3
Query:    3 FLFSGWACSAVGKTAQEVVNEVRRQFIERPGIMEYKEKPDYARCVAIVASASLREMIKPGALAIISPLVIGLLF---RILGYYTGHXXXXXXXXXXXXMFATVSGILMALFLNTAGGAWDNA 359
            FLF  +A  AVGK A E++ EVRRQF E PG+ME K KPDYARCV I   A++R+MI PG LA+I+PL++G  F    + G   G                TV+G+L+A+F+  AGGAWD+A
Sbjct:   91 FLFCAFAMEAVGKAAFEMIGEVRRQFREIPGLMEGKAKPDYARCVDISTRAAIRQMIAPGLLAVITPLIVGFGFGAQALGGMLAG---------------VTVAGVLLAIFMANAGGAWDHA 197          
BLAST of CX300632 vs. ExPASy Swiss-Prot
Match: HPPA_RHIRD (Pyrophosphate-energized proton pump (Fragment) OS=Rhizobium radiobacter GN=hppA PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.404e-15
Identity = 46/111 (41.44%), Postives = 63/111 (56.76%), Query Frame = 3
Query:    3 FLFSGWACSAVGKTAQEVVNEVRRQFIERPGIMEYKEKPDYARCVAIVASASLREMIKPGALAIISPLVIGLLF---RILGYYTGHXXXXXXXXXXXXMFATVSGILMALF 326
            FL   +   AVGK A E++ EVRRQF E PGIME   +PDYA+CV I   A++REM+ PG  A+ +PL++G L     + G+  G                T SG+L+A+F
Sbjct:   91 FLVCAFTMEAVGKAAFEMIEEVRRQFREIPGIMEGTGRPDYAKCVDISTKAAIREMMLPGVFAVGAPLIVGFLLGAKALAGFLAG---------------VTASGVLLAIF 186          
BLAST of CX300632 vs. ExPASy Swiss-Prot
Match: HPPA_CHRVI (Pyrophosphate-energized proton pump (Fragment) OS=Chromatium vinosum GN=hppA PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 4.085e-15
Identity = 48/120 (40.00%), Postives = 67/120 (55.83%), Query Frame = 3
Query:    3 FLFSGWACSAVGKTAQEVVNEVRRQFIERPGIMEYKEKPDYARCVAIVASASLREMIKPGALAIISPLVIGLLFRIL-GYYTGHXXXXXXXXXXXXMFATVSGILMALFLNTAGGAWDNA 359
            +LF   A  AVG+ A  VV EVRRQF E  GIME   KPDY+R V ++  A+++EM+ P  L I+ P+ + +   IL G   G             +   V+G+ +A+ + T GGAWDNA
Sbjct:   83 YLFGAMAMEAVGRAAGSVVIEVRRQFREIKGIMEGTAKPDYSRAVDLLTKAAIKEMVVPSLLPILVPVAVAIGMNILMGDGAG-----IRALGGMLIGTIVTGLFVAISMCTGGGAWDNA 197          
BLAST of CX300632 vs. ExPASy Swiss-Prot
Match: HPPA1_RHILT (Pyrophosphate-energized proton pump 1 (Fragment) OS=Rhizobium leguminosarum bv. trifolii GN=hppA1 PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.188e-14
Identity = 37/70 (52.86%), Postives = 50/70 (71.43%), Query Frame = 3
Query:    3 FLFSGWACSAVGKTAQEVVNEVRRQFIERPGIMEYKEKPDYARCVAIVASASLREMIKPGALAIISPLVI 212
            +LF G A +AVGK A  +V EVRRQF E+PGIM   EKPDY R V ++  A++REM+ P  L +++PLV+
Sbjct:   58 YLFGGIAMTAVGKAASAIVEEVRRQFREKPGIMAGTEKPDYGRAVDLLTKAAIREMVIPSLLPVLAPLVV 127          
The following BLAST results are available for this feature:
BLAST of CX300632 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
HPPA_RHIME1.764e-3442.78Pyrophosphate-energized proton pump OS=Rhizobium m... [more]
HPPA_CAUCR3.008e-3443.33Pyrophosphate-energized proton pump OS=Caulobacter... [more]
HPPA2_RHOPA6.702e-3442.78Pyrophosphate-energized proton pump OS=Rhodopseudo... [more]
HPPA1_MYCDI8.753e-3444.97Pyrophosphate-energized proton pump 1 (Fragment) O... [more]
HPPA_MYXXA9.677e-3343.58Pyrophosphate-energized proton pump (Fragment) OS=... [more]
HPPA_RHILO1.651e-3242.22Pyrophosphate-energized proton pump OS=Rhizobium l... [more]
HPPA_HELCL2.389e-2348.36Pyrophosphate-energized proton pump (Fragment) OS=... [more]
HPPA_RHIRD1.404e-1541.44Pyrophosphate-energized proton pump (Fragment) OS=... [more]
HPPA_CHRVI4.085e-1540.00Pyrophosphate-energized proton pump (Fragment) OS=... [more]
HPPA1_RHILT1.188e-1452.86Pyrophosphate-energized proton pump 1 (Fragment) O... [more]

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Properties
Property NameValue
Genbank descriptionC07012E02SK SaltLeaf1 Citrus clementina cDNA clone C07012E02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300632 ID=CX300632; Name=CX300632; organism=Citrus clementina; type=EST; length=593bp
TTTTCTTATTTAGTGGATGGGCTTGCTCTGCAGTTGGCAAAACTGCTCAG
GAGGTTGTTAATGAGGTTAGAAGACAGTTCATTGAGAGGCCTGGTATCAT
GGAGTACAAGGAGAAGCCAGACTATGCTCGCTGTGTCGCAATTGTGGCAT
CTGCATCTTTGCGGGAGATGATAAAGCCTGGTGCCCTCGCTATCATATCA
CCATTAGTGATTGGTCTTCTTTTTCGGATTTTGGGATACTATACAGGACA
TGCGCTACTAGGGGCCAAAGTGGTGGCTGCTTTACTGATGTTTGCAACTG
TCTCTGGTATTCTTATGGCTCTTTTCCTGAACACAGCCGGAGGAGCATGG
GATAATGCAAAGAAGTTCATAGAGACTGGGGCTCTTGGAGGCAAAGGTAG
TGATACTCATAAAGCAGCGGTCACAGGAGATACTGTGGGCGATCCATTCA
AAGACACAGCCGGACCTTCACTTCATGTTCTCATTAAAATGCTTGCGACC
ATAACGCTTGTCATGGCTCCCATCTTCCTGTGAGAGAGTTGTTAATATCT
ATCGCAGTTTTCCCAGAACATACAAGCACCCATTACCGTTGAA
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