CX300644
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300644 vs. ExPASy Swiss-Prot
Match: TDH_FRATN (L-threonine 3-dehydrogenase OS=Francisella tularensis subsp. novicida (strain U112) GN=tdh PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.793e-12 Identity = 45/156 (28.85%), Postives = 82/156 (52.56%), Query Frame = 1 Query: 7 GAPRIVIVDVDDYRLSVAKKLGADNIVKVS--TNLQDIAEEVEKIQKAMG--TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHREMTVPLTPAAAREVDVVGVFRYK--NTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARG 456 GA RIVI D+++YRL +A+ GA + V+ N ++ +++ K+ +G G D+ + +G N +S L GGK+ L+G+ +++V + + + G++ + TW L L++G +D+ P+ITHR E ++ FE G Sbjct: 188 GARRIVITDINEYRLQMARDFGATVALNVAPFKNQDELVKQMRKVMSDIGMTEGFDIGLEMSGINSAISMMLDVMNHGGKLSLLGISAGDISVDWGAILFKGLTLKGIYGREMFETWYLMTSMLQAG-MDMNPIITHRLHID--EFQKGFEIMKSG 340
BLAST of CX300644 vs. ExPASy Swiss-Prot
Match: TDH_ENT38 (L-threonine 3-dehydrogenase OS=Enterobacter sp. (strain 638) GN=tdh PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.793e-12 Identity = 47/162 (29.01%), Postives = 85/162 (52.47%), Query Frame = 1 Query: 7 GAPRIVIVDVDDYRLSVAKKLGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHREMTVPLTPAAAREVDVVGVFRYK--NTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGTAIKVMFN 483 GA +VI DV++YRLS+A+K+G V VS NL D+ E+ M G DV + +G + L GG++ ++G+ +M++ + + + G++ + TW ++SG +D+ P+ITH FG + ++ F+ + R G + KV+ + Sbjct: 187 GARNVVITDVNEYRLSLARKMGVTRAVDVSKENLNDVMAEL-----GMTEGFDVGLEMSGAPPAFRSMLDTMNHGGRIAMLGIPPSDMSIDWNKVIFKGLFIKGIYGREMFETWYKMAALIQSG-LDLTPIITHHFGID--DFQKGFD-AMRSGQSGKVILS 339
BLAST of CX300644 vs. ExPASy Swiss-Prot
Match: TDH_ECO5E (L-threonine 3-dehydrogenase OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=tdh PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.793e-12 Identity = 45/153 (29.41%), Postives = 79/153 (51.63%), Query Frame = 1 Query: 7 GAPRIVIVDVDDYRLSVAKKLGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHREMTVPLTPAAAREVDVVGVFRYK--NTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARG 456 GA +VI DV++YRL +A+K+G V V+ NL D+ E+ M G DV + +G T L GG++ ++G+ +M++ T + + + G++ + TW ++SG +D+ P+ITHR FS + ++ F+ G Sbjct: 187 GARNVVITDVNEYRLELARKMGITRAVNVAKENLNDVMAEL-----GMTEGFDVGLEMSGAPPAFRTMLDTMNHGGRIAMLGIPPSDMSIDWTKVIFKGLFIKGIYGREMFETWYKMAALIQSG-LDLSPIITHR--FSIDDFQKGFDAMCSG 331
BLAST of CX300644 vs. ExPASy Swiss-Prot
Match: TDH_ECO57 (L-threonine 3-dehydrogenase OS=Escherichia coli O157:H7 GN=tdh PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.793e-12 Identity = 45/153 (29.41%), Postives = 79/153 (51.63%), Query Frame = 1 Query: 7 GAPRIVIVDVDDYRLSVAKKLGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHREMTVPLTPAAAREVDVVGVFRYK--NTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARG 456 GA +VI DV++YRL +A+K+G V V+ NL D+ E+ M G DV + +G T L GG++ ++G+ +M++ T + + + G++ + TW ++SG +D+ P+ITHR FS + ++ F+ G Sbjct: 187 GARNVVITDVNEYRLELARKMGITRAVNVAKENLNDVMAEL-----GMTEGFDVGLEMSGAPPAFRTMLDTMNHGGRIAMLGIPPSDMSIDWTKVIFKGLFIKGIYGREMFETWYKMAALIQSG-LDLSPIITHR--FSIDDFQKGFDAMCSG 331
BLAST of CX300644 vs. ExPASy Swiss-Prot
Match: TDH_ECO24 (L-threonine 3-dehydrogenase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=tdh PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.793e-12 Identity = 48/162 (29.63%), Postives = 85/162 (52.47%), Query Frame = 1 Query: 7 GAPRIVIVDVDDYRLSVAKKLGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHREMTVPLTPAAAREVDVVGVFRYK--NTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGTAIKVMFN 483 GA +VI DV++YRL +A+K+G V V+ NL D+ E+ M G DV + G T L GG++ ++G+ +M++ T + + + G++ + TW ++SG +D+ P+ITHR FS + ++ F+ + R G + KV+ + Sbjct: 187 GARNVVITDVNEYRLELARKMGITRAVNVAKENLNDVMAEL-----GMTEGFDVGLEMPGAPPAFRTMLDTMNHGGRIAMLGIPPSDMSIDWTKVIFKGLFIKGIYGREMFETWYKMAALIQSG-LDLSPIITHR--FSIDDFQKGFD-AMRSGQSGKVILS 339
BLAST of CX300644 vs. ExPASy Swiss-Prot
Match: TDH_CHRVO (L-threonine 3-dehydrogenase OS=Chromobacterium violaceum GN=tdh PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.793e-12 Identity = 47/157 (29.94%), Postives = 78/157 (49.68%), Query Frame = 1 Query: 7 GAPRIVIVDVDDYRLSVAKKLGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHREMTVPLTPAAAREVDVVGVFRYK--NTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGTAI 468 GA +VI DV+DYRL +AKK+GA V V+ +L+ + +E+ M G DV + +G + L GGKV L+G+ + + +++ G++ + TW + ++SG +D+ P+ITH F + E A S + G I Sbjct: 187 GARHVVITDVNDYRLELAKKMGATRAVNVAREDLKAVMQELH-----MSEGFDVGLEMSGNPQAFRQMLETMNHGGKVALLGIPPSNTAIDWNQVIFKGLEIKGIYGREMFETWYKMVALIQSG-LDISPIITHHFKVDEFEQGFAAMLSGQSGKVI 337
BLAST of CX300644 vs. ExPASy Swiss-Prot
Match: TDH_SHESH (L-threonine 3-dehydrogenase OS=Shewanella sediminis (strain HAW-EB3) GN=tdh PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.341e-12 Identity = 47/162 (29.01%), Postives = 84/162 (51.85%), Query Frame = 1 Query: 7 GAPRIVIVDVDDYRLSVAKKLGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHREMTVPLTPAAAREVDVVGVFRYK--NTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGTAIKVMFN 483 GA +VI DV++YRL +A K+GA V V+ +L+ + EE+ M G DV + +G + L GGK+ ++G+ EM + + + + + G++ + TW ++SG +D+ P+ITH F + ++ F+ + R G + KV+ N Sbjct: 187 GARHVVITDVNEYRLELANKMGATRAVNVAKESLEGVMEEL-----GMTEGFDVGLEMSGVPSAFHSMLDTMNHGGKIAMLGIPGGEMAIDWSKVIFKGLILKGIYGREMFETWYKMASLIQSG-LDISPIITHHFKID--DFQQGFD-AMRSGQSGKVILN 339
BLAST of CX300644 vs. ExPASy Swiss-Prot
Match: TDH_SHIDS (L-threonine 3-dehydrogenase OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=tdh PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.058e-12 Identity = 47/162 (29.01%), Postives = 85/162 (52.47%), Query Frame = 1 Query: 7 GAPRIVIVDVDDYRLSVAKKLGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHREMTVPLTPAAAREVDVVGVFRYK--NTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGTAIKVMFN 483 GA +VI DV++YRL +A+K+G V+ NL D+ E+ M G DV + +G T L GG++ ++G+ +M++ T + + + G++ + TW ++SG +D+ P+ITHR FS + ++ F+ + R G + KV+ + Sbjct: 187 GARNVVITDVNEYRLELARKMGITRAANVAKENLNDVMAEL-----GMTEGFDVGLEMSGAPPAFRTMLDTMNHGGRIAMLGIPPSDMSIDWTKVIFKGLFIKGIYGREMFETWYKMAALIQSG-LDLSPIITHR--FSIDDFQKGFD-AMRSGQSGKVILS 339
BLAST of CX300644 vs. ExPASy Swiss-Prot
Match: TDH_SHESR (L-threonine 3-dehydrogenase OS=Shewanella sp. (strain MR-7) GN=tdh PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.058e-12 Identity = 43/153 (28.10%), Postives = 78/153 (50.98%), Query Frame = 1 Query: 7 GAPRIVIVDVDDYRLSVAKKLGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHREMTVPLTPAAAREVDVVGVFRYK--NTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARG 456 GA +VI DV++YRL +A+K+GA V V+ NL+D+ +E+ M G DV + +G L GGK+ ++G+ EM + + + + + G++ + TW ++SG +D+ P+ITH + + ++ F+ G Sbjct: 187 GARHVVITDVNEYRLELARKMGATRAVNVAQENLKDVMKEL-----GMTEGFDVGLEMSGVPSAFHAMLDTMNHGGKIAMLGIPGGEMAIDWSKVIFKGLVIKGIYGREMFETWYKMASLIQSG-LDISPIITHHYKID--DFQKGFDAMGSG 331
BLAST of CX300644 vs. ExPASy Swiss-Prot
Match: TDH_SHEON (L-threonine 3-dehydrogenase OS=Shewanella oneidensis GN=tdh PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.058e-12 Identity = 43/153 (28.10%), Postives = 78/153 (50.98%), Query Frame = 1 Query: 7 GAPRIVIVDVDDYRLSVAKKLGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHREMTVPLTPAAAREVDVVGVFRYK--NTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARG 456 GA +VI DV++YRL +A+K+GA V V+ NL+D+ +E+ M G DV + +G L GGK+ ++G+ EM + + + + + G++ + TW ++SG +D+ P+ITH + + ++ F+ G Sbjct: 187 GARHVVITDVNEYRLELARKMGATRAVNVAQENLKDVMKEL-----GMTEGFDVGLEMSGVPSAFRAMLDTMNHGGKIAMLGIPGGEMAIDWSKVIFKGLVIKGIYGREMFETWYKMASLIQSG-LDISPIITHHYKID--DFQKGFDAMGSG 331 The following BLAST results are available for this feature:
BLAST of CX300644 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 166
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300644 ID=CX300644; Name=CX300644; organism=Citrus clementina; type=EST; length=660bpback to top |