CX300644
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300644 vs. ExPASy Swiss-Prot
Match: TDH_SALEP (L-threonine 3-dehydrogenase OS=Salmonella enteritidis PT4 (strain P125109) GN=tdh PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.058e-12 Identity = 47/162 (29.01%), Postives = 86/162 (53.09%), Query Frame = 1 Query: 7 GAPRIVIVDVDDYRLSVAKKLGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHREMTVPLTPAAAREVDVVGVFRYK--NTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGTAIKVMFN 483 GA +VI DV++YRL +A+K+G V V+ +L D+ E+ M G DV + +G T L GG++ ++G+ +M++ T + + + G++ + TW ++SG +D+ P+ITHR FS + ++ F+ + R G + KV+ + Sbjct: 187 GARHVVITDVNEYRLELARKMGVTRAVNVAKESLNDVMAEL-----GMTEGFDVGLEMSGAPPAFRTMLDTMNHGGRIAMLGIPPSDMSIDWTKVIFKGLFIKGIYGREMFETWYKMAALIQSG-LDLSPIITHR--FSIDDFQKGFD-AMRSGQSGKVILS 339
BLAST of CX300644 vs. ExPASy Swiss-Prot
Match: TDH_SALDC (L-threonine 3-dehydrogenase OS=Salmonella dublin (strain CT_02021853) GN=tdh PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.058e-12 Identity = 47/162 (29.01%), Postives = 86/162 (53.09%), Query Frame = 1 Query: 7 GAPRIVIVDVDDYRLSVAKKLGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHREMTVPLTPAAAREVDVVGVFRYK--NTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGTAIKVMFN 483 GA +VI DV++YRL +A+K+G V V+ +L D+ E+ M G DV + +G T L GG++ ++G+ +M++ T + + + G++ + TW ++SG +D+ P+ITHR FS + ++ F+ + R G + KV+ + Sbjct: 187 GARHVVITDVNEYRLELARKMGVTRAVNVAKESLNDVMAEL-----GMTEGFDVGLEMSGAPPAFRTMLDTMNHGGRIAMLGIPPSDMSIDWTKVIFKGLFIKGIYGREMFETWYKMAALIQSG-LDLSPIITHR--FSIDDFQKGFD-AMRSGQSGKVILS 339
BLAST of CX300644 vs. ExPASy Swiss-Prot
Match: TDH_SALCH (L-threonine 3-dehydrogenase OS=Salmonella choleraesuis GN=tdh PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.058e-12 Identity = 47/162 (29.01%), Postives = 86/162 (53.09%), Query Frame = 1 Query: 7 GAPRIVIVDVDDYRLSVAKKLGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHREMTVPLTPAAAREVDVVGVFRYK--NTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGTAIKVMFN 483 GA +VI DV++YRL +A+K+G V V+ +L D+ E+ M G DV + +G T L GG++ ++G+ +M++ T + + + G++ + TW ++SG +D+ P+ITHR FS + ++ F+ + R G + KV+ + Sbjct: 187 GARHVVITDVNEYRLELARKMGVTRAVNVAKESLNDVMAEL-----GMTEGFDVGLEMSGAPPAFRTMLDTMNHGGRIAMLGIPPSDMSIDWTKVIFKGLFIKGIYGREMFETWYKMAALIQSG-LDLSPIITHR--FSIDDFQKGFD-AMRSGQSGKVILS 339
BLAST of CX300644 vs. ExPASy Swiss-Prot
Match: TDH_SALA4 (L-threonine 3-dehydrogenase OS=Salmonella agona (strain SL483) GN=tdh PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.058e-12 Identity = 47/162 (29.01%), Postives = 86/162 (53.09%), Query Frame = 1 Query: 7 GAPRIVIVDVDDYRLSVAKKLGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHREMTVPLTPAAAREVDVVGVFRYK--NTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGTAIKVMFN 483 GA +VI DV++YRL +A+K+G V V+ +L D+ E+ M G DV + +G T L GG++ ++G+ +M++ T + + + G++ + TW ++SG +D+ P+ITHR FS + ++ F+ + R G + KV+ + Sbjct: 187 GARHVVITDVNEYRLELARKMGVTRAVNVAKESLNDVMAEL-----GMTEGFDVGLEMSGAPPAFRTMLDTMNHGGRIAMLGIPPSDMSIDWTKVIFKGLFIKGIYGREMFETWYKMAALIQSG-LDLSPIITHR--FSIDDFQKGFD-AMRSGQSGKVILS 339
BLAST of CX300644 vs. ExPASy Swiss-Prot
Match: TDH_PYRKO (Probable L-threonine 3-dehydrogenase OS=Pyrococcus kodakaraensis GN=tdh PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.058e-12 Identity = 53/164 (32.32%), Postives = 84/164 (51.22%), Query Frame = 1 Query: 1 AFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHREMTVP---LTPAAAREVDVVGVFRYKNTWPLCLEFLRSGKIDVKPLITHRF-GFSQKEVEEAFETSARGGTAIKVMF 480 A GA +++ + ++R +AKK+GAD +V +D + V I G G++V + +G K + L A GG+V L+G+ RE+T+ L A EV + TW ++SGK+++ P+ITH++ GF + EEAFE G T V F Sbjct: 189 ASGAYPVIVSEPSEFRRKLAKKVGADYVVNPFE--EDPVKFVMDITD--GAGVEVFLEFSGAPKALEQGLKAVTPGGRVSLLGLFPREVTIDFNNLIIFKALEVHGITGRHLWETWYTVSSLIQSGKLNLDPIITHKYKGFD--KFEEAFELMRAGKTGKVVFF 346
BLAST of CX300644 vs. ExPASy Swiss-Prot
Match: TDH_ERWCT (L-threonine 3-dehydrogenase OS=Erwinia carotovora subsp. atroseptica GN=tdh PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.058e-12 Identity = 48/162 (29.63%), Postives = 82/162 (50.62%), Query Frame = 1 Query: 7 GAPRIVIVDVDDYRLSVAKKLGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHREMTVPLTPAAAREVDVVGVFRYK--NTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGTAIKVMFN 483 GA +VI DV+ YRL +A K+GA V V+ L D+ I+ M G D+ + +G L A GG++ ++G+ H M++ + + + G++ + TW ++SG +D+ P+ITHRF E ++ F+ + R G + KV+ N Sbjct: 187 GARNVVITDVNAYRLELASKMGATRAVNVAEEKLTDV-----MIELGMTEGFDIGLEMSGAPSAFRAMLKAMNHGGRIAMLGIPHEPMSIDWGEVIFKGLFIKGIYGREMFETWYKMSALIQSG-LDLSPIITHRFHID--EFQKGFD-AMRSGQSGKVILN 339
BLAST of CX300644 vs. ExPASy Swiss-Prot
Match: XYLD_RHILO (Putative D-xylulose reductase OS=Rhizobium loti GN=mlr4915 PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.993e-12 Identity = 46/152 (30.26%), Postives = 78/152 (51.32%), Query Frame = 1 Query: 1 AFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHREMTVPLTPAAAREVDVVGVFRYKNTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARG 456 A G +++I D +L +A + IV V+ + + + V G D+ F+ +G K + R GG V LVG+ + + + A ++EV + VFRY N + L+ + SGK+D+KPLIT + F+ + +AFE +A+G Sbjct: 187 AGGCSKVLISDFSAPKLKIAAQYAG--IVPVNIGERSLVDAVAAATDKWGA--DIVFEASGSPKAFADLFDVVRPGGAVVLVGLPVEPVALNVPAAISKEVRIETVFRYANIFDRALQLIASGKVDLKPLITGTYDFA--DSIKAFERAAQG 332
BLAST of CX300644 vs. ExPASy Swiss-Prot
Match: TDH_VIBCM (L-threonine 3-dehydrogenase OS=Vibrio cholerae serotype O1 (strain M66-2) GN=tdh PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.993e-12 Identity = 46/162 (28.40%), Postives = 82/162 (50.62%), Query Frame = 1 Query: 7 GAPRIVIVDVDDYRLSVAKKLGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHREMTVPLTPAAAREVDVVGVFRYK--NTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGTAIKVMFN 483 GA +VI DV++YRL +A+K+G V V+ NL+D+ +E+ M G DV + +G S L GG++ L+G+ M + + + + G++ + TW ++SG +D+ P+ITH F + ++ F+ R G + KV+ + Sbjct: 189 GARHVVITDVNEYRLDLARKMGVTRAVNVAEQNLEDVMKEL-----GMTEGFDVGLEMSGVPSAFSAMLKTMNHGGRIALLGIPPSSMAIDWNQVIFKGLVIKGIYGREMFETWYKMASLIQSG-LDISPIITHH--FKVDDFQKGFDI-MRSGASGKVILD 341
BLAST of CX300644 vs. ExPASy Swiss-Prot
Match: TDH_VIBCH (L-threonine 3-dehydrogenase OS=Vibrio cholerae GN=tdh PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.993e-12 Identity = 46/162 (28.40%), Postives = 82/162 (50.62%), Query Frame = 1 Query: 7 GAPRIVIVDVDDYRLSVAKKLGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHREMTVPLTPAAAREVDVVGVFRYK--NTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGTAIKVMFN 483 GA +VI DV++YRL +A+K+G V V+ NL+D+ +E+ M G DV + +G S L GG++ L+G+ M + + + + G++ + TW ++SG +D+ P+ITH F + ++ F+ R G + KV+ + Sbjct: 189 GARHVVITDVNEYRLDLARKMGVTRAVNVAEQNLEDVMKEL-----GMTEGFDVGLEMSGVPSAFSAMLKTMNHGGRIALLGIPPSSMAIDWNQVIFKGLVIKGIYGREMFETWYKMASLIQSG-LDISPIITHH--FKVDDFQKGFDI-MRSGASGKVILD 341
BLAST of CX300644 vs. ExPASy Swiss-Prot
Match: TDH_VIBC3 (L-threonine 3-dehydrogenase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=tdh PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.993e-12 Identity = 46/162 (28.40%), Postives = 82/162 (50.62%), Query Frame = 1 Query: 7 GAPRIVIVDVDDYRLSVAKKLGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHREMTVPLTPAAAREVDVVGVFRYK--NTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGTAIKVMFN 483 GA +VI DV++YRL +A+K+G V V+ NL+D+ +E+ M G DV + +G S L GG++ L+G+ M + + + + G++ + TW ++SG +D+ P+ITH F + ++ F+ R G + KV+ + Sbjct: 189 GARHVVITDVNEYRLDLARKMGVTRAVNVAEQNLEDVMKEL-----GMTEGFDVGLEMSGVPSAFSAMLKTMNHGGRIALLGIPPSSMAIDWNQVIFKGLVIKGIYGREMFETWYKMASLIQSG-LDISPIITHH--FKVDDFQKGFDI-MRSGASGKVILD 341 The following BLAST results are available for this feature:
BLAST of CX300644 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 166
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300644 ID=CX300644; Name=CX300644; organism=Citrus clementina; type=EST; length=660bpback to top |