CX300644
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300644 vs. ExPASy Swiss-Prot
Match: TDH_AGRRK (L-threonine 3-dehydrogenase OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=tdh PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 8.897e-12 Identity = 45/160 (28.12%), Postives = 78/160 (48.75%), Query Frame = 1 Query: 7 GAPRIVIVDVDDYRLSVAKKLGADNIVKVST-NLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHREMTVPLTPAAAREVDVVGVFRYK--NTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGTAIKVM 477 GA ++VI D++ RL++A KLG D++V S NL D+ + + M G DV + +G + GGK+ ++G+ + + +++ G++ + TW + F++ G +DV P+ITHR G + E FE G + VM Sbjct: 191 GARKVVITDINPNRLALAHKLGIDHVVDASKENLADVMKSI-----GMTEGFDVGLEMSGAAPAFRDMIDKMNNGGKIAILGIAPAGFEIDWNKVIFKMLNLKGIYGREMFETWYKMIAFVQGG-LDVSPVITHRIGID--DFREGFEAMRSGNSGKVVM 342
BLAST of CX300644 vs. ExPASy Swiss-Prot
Match: TDH_SHESM (L-threonine 3-dehydrogenase OS=Shewanella sp. (strain MR-4) GN=tdh PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.162e-11 Identity = 42/153 (27.45%), Postives = 78/153 (50.98%), Query Frame = 1 Query: 7 GAPRIVIVDVDDYRLSVAKKLGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHREMTVPLTPAAAREVDVVGVFRYK--NTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARG 456 GA +VI DV++YRL +A+K+GA V V+ +L+D+ +E+ M G DV + +G L GGK+ ++G+ EM + + + + + G++ + TW ++SG +D+ P+ITH + + ++ F+ G Sbjct: 187 GARHVVITDVNEYRLELARKMGATRAVNVAQESLKDVMKEL-----GMTEGFDVGLEMSGVPSAFHAMLDTMNHGGKIAMLGIPGGEMAIDWSKVIFKGLVIKGIYGREMFETWYKMASLIQSG-LDISPIITHHYKID--DFQKGFDAMGSG 331
BLAST of CX300644 vs. ExPASy Swiss-Prot
Match: TDH_SHESA (L-threonine 3-dehydrogenase OS=Shewanella sp. (strain ANA-3) GN=tdh PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.162e-11 Identity = 42/153 (27.45%), Postives = 78/153 (50.98%), Query Frame = 1 Query: 7 GAPRIVIVDVDDYRLSVAKKLGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHREMTVPLTPAAAREVDVVGVFRYK--NTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARG 456 GA +VI DV++YRL +A+K+GA V V+ +L+D+ +E+ M G DV + +G L GGK+ ++G+ EM + + + + + G++ + TW ++SG +D+ P+ITH + + ++ F+ G Sbjct: 187 GARHVVITDVNEYRLELARKMGATRAVNVAQESLKDVMKEL-----GMTEGFDVGLEMSGVPSAFHAMLDTMNHGGKIAMLGIPGGEMAIDWSKVIFKGLVIKGIYGREMFETWYKMASLIQSG-LDISPIITHHYKID--DFQKGFDAMGSG 331
BLAST of CX300644 vs. ExPASy Swiss-Prot
Match: TDH_RHIL3 (L-threonine 3-dehydrogenase OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=tdh PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.162e-11 Identity = 43/160 (26.88%), Postives = 79/160 (49.38%), Query Frame = 1 Query: 7 GAPRIVIVDVDDYRLSVAKKLGADNIVKVST-NLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHREMTVPLTPAAAREVDVVGVFRYK--NTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGTAIKVM 477 GA ++VI D++ +RL +A+KLG D++V S NL D+ + + M G DV + +G + GGK+ ++G+ + + +++ G++ + TW + F++ G +D+ P+ITHR G + + FE G + VM Sbjct: 191 GARKVVITDINPHRLELARKLGIDHVVDASKENLADVMKAI-----GMTEGFDVGLEMSGAAPAFRDMIDKMNNGGKIAILGIAPAGFEIDWNKVIFKMLNLKGIYGREMFETWYKMIAFVQGG-LDLAPIITHRIGID--DFRDGFEAMRSGNSGKVVM 342
BLAST of CX300644 vs. ExPASy Swiss-Prot
Match: TDH_PSEHT (L-threonine 3-dehydrogenase OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=tdh PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.162e-11 Identity = 43/157 (27.39%), Postives = 79/157 (50.32%), Query Frame = 1 Query: 7 GAPRIVIVDVDDYRLSVAKKLGADNIVKVST-NLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHREMTVPLTPAAAREVDVVGVFRYK--NTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGTAI 468 GA +VI DV++YRL +A+K+GA V V+ L+D+ +E+ M G D+ + +G ++ L+ GGKV ++G+ +M V + + + G++ + TW ++SG +D+ P+ITH++ + S + G I Sbjct: 187 GARHVVISDVNEYRLELARKMGATRAVNVANEKLEDVIKEL-----GMTEGFDIGLEMSGVPSAFNSMLNNMNHGGKVAMLGIPPSDMAVDWNQVIFKGLVIKGIYGREMFETWYKMASLIQSG-LDLNPIITHQYSIDDFQAGFDMMISGQSGKVI 337
BLAST of CX300644 vs. ExPASy Swiss-Prot
Match: TDH_IDILO (L-threonine 3-dehydrogenase OS=Idiomarina loihiensis GN=tdh PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.162e-11 Identity = 47/162 (29.01%), Postives = 78/162 (48.15%), Query Frame = 1 Query: 7 GAPRIVIVDVDDYRLSVAKKLGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHREMTVPLTPAAAREVDVVGVFRYK--NTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGTAIKVMFN 483 GA +VI DV++YRL +A+K+G V VS L D+ E+ M G DV + +G S L GGK+ ++G+ + + + + + G++ + TW L+SG +D+ P++TH + E+ FET G + KV+ N Sbjct: 187 GARHVVITDVNEYRLDLARKMGVTRAVDVSKEKLSDVMTEL-----GMKEGFDVGLEMSGVPSAFSQMLETMNHGGKIAMLGIPPENIAIDWNQVIFKGLVIKGIYGREMFETWYKMASLLQSG-LDISPILTHEMPID--DFEKGFETMISGQSG-KVILN 339
BLAST of CX300644 vs. ExPASy Swiss-Prot
Match: TDH_CITK8 (L-threonine 3-dehydrogenase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=tdh PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.162e-11 Identity = 47/162 (29.01%), Postives = 85/162 (52.47%), Query Frame = 1 Query: 7 GAPRIVIVDVDDYRLSVAKKLGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHREMTVPLTPAAAREVDVVGVFRYK--NTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGTAIKVMFN 483 GA +VI DV++YRL +A+K+G + V V+ NL D+ + M G DV + +G L GG++ ++G+ +M++ T + + + G++ + TW ++SG +D+ P+ITHR FS E ++ F+ + R G + KV+ + Sbjct: 187 GARHVVITDVNEYRLELARKMGIIHTVNVAKENLTDVMANL-----GMTEGFDVGLEMSGAPPAFRAMLDTMNHGGRIAMLGIPPSDMSIDWTKVIFKGLFIKGIYGREMFETWYKMAALIQSG-LDLSPIITHR--FSIDEFQKGFD-AMRSGQSGKVILS 339
BLAST of CX300644 vs. ExPASy Swiss-Prot
Match: TDH_SHELP (L-threonine 3-dehydrogenase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=tdh PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.518e-11 Identity = 44/162 (27.16%), Postives = 84/162 (51.85%), Query Frame = 1 Query: 7 GAPRIVIVDVDDYRLSVAKKLGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHREMTVPLTPAAAREVDVVGVFRYK--NTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGTAIKVMFN 483 GA +VI DV++YRL +AKK+GA V V+ L+D+ +++ M G DV + +G + L GGK+ ++G+ +M + + + + + G++ + TW ++SG +D+ P+ITH + + + F+ + R G + KV+ + Sbjct: 187 GARHVVITDVNEYRLELAKKMGATRAVNVAKEKLEDVMQDL-----GMTEGFDVGLEMSGVPAAFHSMLDTMNHGGKIAMLGIPGGDMAIDWSKVIFKGLIIKGIYGREMFETWYKMASLIQSG-LDISPIITHHYNVD--DFQAGFD-AMRSGQSGKVILS 339
BLAST of CX300644 vs. ExPASy Swiss-Prot
Match: TDH_COLP3 (L-threonine 3-dehydrogenase OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=tdh PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.518e-11 Identity = 43/162 (26.54%), Postives = 86/162 (53.09%), Query Frame = 1 Query: 7 GAPRIVIVDVDDYRLSVAKKLGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHREMTVPLTPAAAREVDVVGVFRYK--NTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGTAIKVMFN 483 GA +VI D+++YRL +A+K+GA V VS +L+D+ ++ M G DV + +G ++ L + GGK+ ++G+ +M + + + + + G++ + TW ++SG +D+ P+ITH + + ++ F+ R G + KV+ + Sbjct: 187 GARHVVITDINEYRLDLARKMGATRAVDVSKESLKDVMTDL-----GMTEGFDVGMEMSGVPMAFTSMLESMNNGGKIAMLGIPGSDMAIDWSQVIFKGLTIKGIYGREMFETWYKMASLIQSG-LDLTPIITHHYNID--DFQQGFD-MMRSGQSGKVILD 339
BLAST of CX300644 vs. ExPASy Swiss-Prot
Match: TDH_VIBF1 (L-threonine 3-dehydrogenase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=tdh PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.982e-11 Identity = 42/136 (30.88%), Postives = 72/136 (52.94%), Query Frame = 1 Query: 7 GAPRIVIVDVDDYRLSVAKKLGADNIVKV-STNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHREMTVPLTPAAAREVDVVGVFRYK--NTWPLCLEFLRSGKIDVKPLITHRF 405 GA +VI DV++YRL +AKK+G V V + L+D+ E+ M G DV + +G ++ L+ GGK+ L+G+ +MTV + + + G++ + TW ++SG +D+ P+ITH + Sbjct: 189 GARHVVITDVNEYRLDLAKKMGVTRAVNVMNEKLEDVMSEL-----GMTEGFDVGLEMSGNPSAFNSMLTNMNHGGKISLLGIPPSDMTVDWNQVIFKGLVIKGIYGREMFETWYKMASLIQSG-LDLTPIITHHY 318 The following BLAST results are available for this feature:
BLAST of CX300644 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 166
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300644 ID=CX300644; Name=CX300644; organism=Citrus clementina; type=EST; length=660bpback to top |