CX300644
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300644 vs. ExPASy Swiss-Prot
Match: TDH_RHISN (L-threonine 3-dehydrogenase OS=Rhizobium sp. (strain NGR234) GN=tdh PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 7.531e-11 Identity = 43/160 (26.88%), Postives = 76/160 (47.50%), Query Frame = 1 Query: 7 GAPRIVIVDVDDYRLSVAKKLGADNIVKVST-NLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHREMTVPLTPAAAREVDVVGVFRYK--NTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGTAIKVM 477 GA ++VI D++ RL +A+KLG D++V S NL D+ + M G DV + +G + GGK+ ++G+ + + +++ G++ + TW + F++ G +D+ P+ITHR G + FE G + VM Sbjct: 191 GARKVVITDINPVRLDLARKLGIDHVVDASKENLADVMRSI-----GMTEGFDVGLEMSGAAPAFRDMIDKMNNGGKIAILGIAPAGFEIDWNKVIFKMLNLKGIYGREMFETWYKMIAFVQGG-LDLAPVITHRIGID--AFRDGFEAMRSGNSGKVVM 342
BLAST of CX300644 vs. ExPASy Swiss-Prot
Match: TDH_RHIEC (L-threonine 3-dehydrogenase OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=tdh PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 7.531e-11 Identity = 42/160 (26.25%), Postives = 78/160 (48.75%), Query Frame = 1 Query: 7 GAPRIVIVDVDDYRLSVAKKLGADNIVKVST-NLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHREMTVPLTPAAAREVDVVGVFRYK--NTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGTAIKVM 477 GA ++VI D++ +RL +A+KLG D++V S NL D+ + + M G DV + +G + GGK+ ++G+ + + +++ G++ + TW + F++ G +D+ P+ITHR + + FE G + VM Sbjct: 191 GARKVVITDINPHRLDLARKLGIDHVVDASKENLADVMKAI-----GMTEGFDVGLEMSGAAPAFRDMIDKMNNGGKIAILGIAPAGFEIDWNKVIFKMLNLKGIYGREMFETWYKMIAFVQGG-LDLSPIITHRIKID--DFRDGFEAMRSGNSGKVVM 342
BLAST of CX300644 vs. ExPASy Swiss-Prot
Match: TDH_RHIE6 (L-threonine 3-dehydrogenase OS=Rhizobium etli (strain CIAT 652) GN=tdh PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 7.531e-11 Identity = 42/160 (26.25%), Postives = 78/160 (48.75%), Query Frame = 1 Query: 7 GAPRIVIVDVDDYRLSVAKKLGADNIVKVST-NLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHREMTVPLTPAAAREVDVVGVFRYK--NTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGTAIKVM 477 GA ++VI D++ +RL +A+KLG D++V S NL D+ + + M G DV + +G + GGK+ ++G+ + + +++ G++ + TW + F++ G +D+ P+ITHR + + FE G + VM Sbjct: 191 GARKVVITDINPHRLDLARKLGIDHVVDASKENLADVMKAI-----GMTEGFDVGLEMSGAAPAFRDMIDKMNNGGKIAILGIAPAGFEIDWNKVIFKMLNLKGIYGREMFETWYKMIAFVQGG-LDLSPIITHRIKID--DFRDGFEAMRSGNSGKVVM 342
BLAST of CX300644 vs. ExPASy Swiss-Prot
Match: ADH_RALEU (Alcohol dehydrogenase OS=Ralstonia eutropha GN=adh PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 7.531e-11 Identity = 41/143 (28.67%), Postives = 74/143 (51.75%), Query Frame = 1 Query: 7 GAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHREMTVPLTPAAAREVDVVGVFRYKNTWPLC----------LEFLRSGKIDVKPLITHRF 405 GA I+ +D +D+RL +A+K+GAD ++ D+ +EV K+ G G+D S + G T +L + GG + +G+ ++T+PL+ AA G+ +K LC + + SG++D+ L+TH++ Sbjct: 207 GATTIIAIDGNDHRLEIARKMGADVVLNFRNC--DVVDEVMKLTG--GRGVDASIEALGTQATFEQSLRVLKPGGTLSSLGVYSSDLTIPLSAFAA------GLGDHKINTALCPGGKERMRRLINVIESGRVDLGALVTHQY 339
BLAST of CX300644 vs. ExPASy Swiss-Prot
Match: TDH_VIBPA (L-threonine 3-dehydrogenase OS=Vibrio parahaemolyticus GN=tdh PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 9.836e-11 Identity = 44/162 (27.16%), Postives = 83/162 (51.23%), Query Frame = 1 Query: 7 GAPRIVIVDVDDYRLSVAKKLGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHREMTVPLTPAAAREVDVVGVFRYK--NTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGTAIKVMFN 483 GA +VI DV++YRL +A+K+G V V+ L+D+ E+ M G DV + +G ++ L+ GG++ L+G+ +M + + + + G++ + TW ++SG +D+ P+ITH + + +E F+ R G + KV+ + Sbjct: 189 GARHVVITDVNEYRLELARKMGVTRAVNVAEEKLEDVMAEL-----GMTEGFDVGLEMSGNPAAFNSMLTTMNHGGRIALLGIPPSDMGIDWNQVIFKGLVIKGIYGREMFETWYKMASLIQSG-LDLSPIITHHYKID--DFQEGFDV-MRSGMSGKVILD 341
BLAST of CX300644 vs. ExPASy Swiss-Prot
Match: TDH_AERS4 (L-threonine 3-dehydrogenase OS=Aeromonas salmonicida (strain A449) GN=tdh PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 9.836e-11 Identity = 42/154 (27.27%), Postives = 74/154 (48.05%), Query Frame = 1 Query: 7 GAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEEVEKIQKAMG--TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHREMTVPLTPAAAREVDVVGVFRYK--NTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARG 456 GA +VI DV++YRL +A+K+GA V VS E++ + A+G G DV + +G + GGK+ ++G+ M + + + + G++ + TW ++SG +D+ P+ITH F + ++ FE G Sbjct: 187 GARHVVITDVNEYRLELARKMGATRAVNVS------KEKLADVMSALGMTEGFDVGLEMSGVPSAFQDMIDKMNHGGKIAMLGIPPSTMAIDWNKVIFKGLFIKGIYGREMFETWYKMASLIQSG-LDLTPIITHHFHID--DFQQGFEAMGSG 331 The following BLAST results are available for this feature:
BLAST of CX300644 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 166
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300644 ID=CX300644; Name=CX300644; organism=Citrus clementina; type=EST; length=660bpback to top |