CX300644
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300644 vs. ExPASy Swiss-Prot
Match: TDH_SHEB8 (L-threonine 3-dehydrogenase OS=Shewanella baltica (strain OS185) GN=tdh PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.766e-13 Identity = 46/153 (30.07%), Postives = 78/153 (50.98%), Query Frame = 1 Query: 7 GAPRIVIVDVDDYRLSVAKKLGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHREMTVPLTPAAAREVDVVGVFRYK--NTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARG 456 GA +VI DV++YRL +A+K+GA V VS NL+D+ +E+ M G DV + +G L GGKV ++G+ EM + + + + + G++ + TW ++SG +D+ P+ITH F + ++ F+ G Sbjct: 187 GARHVVITDVNEYRLELARKMGATRAVNVSKENLKDVMKEL-----GMTEGFDVGLEMSGVPSAFHAMLDTMNHGGKVAMLGIPSGEMAIDWSKVIFKGLVIKGIYGREMFETWYKMASLIQSG-LDISPIITHHFKID--DFQQGFDAMGSG 331
BLAST of CX300644 vs. ExPASy Swiss-Prot
Match: TDH_SERP5 (L-threonine 3-dehydrogenase OS=Serratia proteamaculans (strain 568) GN=tdh PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.766e-13 Identity = 49/162 (30.25%), Postives = 86/162 (53.09%), Query Frame = 1 Query: 7 GAPRIVIVDVDDYRLSVAKKLGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHREMTVPLTPAAAREVDVVGVFRYK--NTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGTAIKVMFN 483 GA +VI DV++YRL +A+K+G V VS NL D+ E+ M G DV + +G T L+A GG++ ++G+ +M++ + + + G++ + TW ++SG +D+ P+ITHRF Q ++ F+ + R G + KV+ + Sbjct: 187 GARHVVITDVNEYRLDLARKMGVTRAVNVSKENLNDVMAEL-----GMTEGFDVGLEMSGAPPAFRTLLNAMNHGGRIAMLGIPPSDMSIDWNQVIFKGLFIKGIYGREMFETWYKMAALIQSG-LDLTPIITHRFTIDQ--FQQGFD-AMRSGQSGKVVLS 339
BLAST of CX300644 vs. ExPASy Swiss-Prot
Match: TDH_ALTMD (L-threonine 3-dehydrogenase OS=Alteromonas macleodii (strain DSM 17117 / Deep ecotype) GN=tdh PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.766e-13 Identity = 47/153 (30.72%), Postives = 80/153 (52.29%), Query Frame = 1 Query: 7 GAPRIVIVDVDDYRLSVAKKLGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHREMTVPLTPAAAREVDVVGVFRYK--NTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARG 456 GA +V+ D++ YRL +AKK+GA V VS NLQD+ +E+ M G DV + +G L+ GGK+ ++G+ +++ V + + + G++ + TW L+SG +D+ P+ITH FS + ++ F+T G Sbjct: 187 GARHVVVTDINPYRLELAKKMGATRTVDVSKENLQDVMDEL-----GMSEGFDVGLEMSGVPVAFRDMLNKMNHGGKIAMLGIPPQDVAVDWNQVIFKGLVIKGIYGREMFETWYKMASLLQSG-LDLSPIITHT--FSIDDFQKGFDTMGSG 331
BLAST of CX300644 vs. ExPASy Swiss-Prot
Match: TDH_PHOLL (L-threonine 3-dehydrogenase OS=Photorhabdus luminescens subsp. laumondii GN=tdh PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 4.717e-13 Identity = 51/162 (31.48%), Postives = 84/162 (51.85%), Query Frame = 1 Query: 7 GAPRIVIVDVDDYRLSVAKKLGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHREMTVPLTPAAAREVDVVGVFRYK--NTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGTAIKVMFN 483 GA +VI DV++YRL +A+K+G V VS NL D+ E+ M G DV + +G T L+ GG+V L+G+ +M + + + + G++ + TW ++SG +D+ P+ITHR FS + ++ F+ R G + KV+ N Sbjct: 187 GARHVVITDVNEYRLELARKMGVTRAVNVSQENLTDVMAEL-----GMTEGFDVGLEMSGAPAAFRTLLNTMNHGGRVALLGIPPSDMAIDWNQVIFKGLFIKGIYGREMFETWYKMATLIQSG-LDLTPIITHR--FSIDDFQKGFDI-MRSGQSGKVILN 339
BLAST of CX300644 vs. ExPASy Swiss-Prot
Match: TDH_KLEP7 (L-threonine 3-dehydrogenase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=tdh PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 4.717e-13 Identity = 47/162 (29.01%), Postives = 86/162 (53.09%), Query Frame = 1 Query: 7 GAPRIVIVDVDDYRLSVAKKLGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHREMTVPLTPAAAREVDVVGVFRYK--NTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGTAIKVMFN 483 GA +VI DV++YRL +A+K+G V V+ NL D+ E+ M G DV + +G + L GG++ ++G+ +M++ T + + + G++ + TW ++SG +D+ P+ITHRFG + ++ F+ + R G + KV+ + Sbjct: 187 GARNVVITDVNEYRLELARKMGVTRAVNVAKENLNDVMAEL-----GMTEGFDVGLEMSGAPPAFRSMLDTMNHGGRIAMLGIPPSDMSIDWTKVIFKGLFIKGIYGREMFETWYKMAALIQSG-LDLSPIITHRFGID--DFQKGFD-AMRSGQSGKVVLS 339
BLAST of CX300644 vs. ExPASy Swiss-Prot
Match: TDH_KLEP3 (L-threonine 3-dehydrogenase OS=Klebsiella pneumoniae (strain 342) GN=tdh PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 4.717e-13 Identity = 47/162 (29.01%), Postives = 86/162 (53.09%), Query Frame = 1 Query: 7 GAPRIVIVDVDDYRLSVAKKLGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHREMTVPLTPAAAREVDVVGVFRYK--NTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGTAIKVMFN 483 GA +VI DV++YRL +A+K+G V V+ NL D+ E+ M G DV + +G + L GG++ ++G+ +M++ T + + + G++ + TW ++SG +D+ P+ITHRFG + ++ F+ + R G + KV+ + Sbjct: 187 GARNVVITDVNEYRLELARKMGVTRAVNVAKENLNDVMAEL-----GMTEGFDVGLEMSGAPPAFRSMLDTMNHGGRIAMLGIPPSDMSIDWTKVIFKGLFIKGIYGREMFETWYKMAALIQSG-LDLSPIITHRFGID--DFQKGFD-AMRSGQSGKVVLS 339
BLAST of CX300644 vs. ExPASy Swiss-Prot
Match: TDH_FRAP2 (L-threonine 3-dehydrogenase OS=Francisella philomiragia subsp. philomiragia (strain ATCC 25017) GN=tdh PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.161e-13 Identity = 48/156 (30.77%), Postives = 81/156 (51.92%), Query Frame = 1 Query: 7 GAPRIVIVDVDDYRLSVAKKLGADNIVKVS--TNLQDIAEEVEKIQKAMG--TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHREMTVPLTPAAAREVDVVGVFRYK--NTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARG 456 GA RIVI D++ YRL +A+ GA V VS N Q + ++ K+ +G G DV + +G N +S L GGK+ L+G+ +++V + + + G++ + TW L L++G +D++P+ITHR + ++ FE G Sbjct: 188 GARRIVITDINKYRLQMARDFGATVAVNVSEFQNQQQLTAQMRKVMSEIGMTEGFDVGLEMSGINSAISMMLDVMNHGGKLSLLGISAGDISVDWGAILFKGLTLKGIYGREMFETWYLMTSMLQAG-MDMEPIITHRLHID--DYQKGFEIMKSG 340
BLAST of CX300644 vs. ExPASy Swiss-Prot
Match: TDH_ESCF3 (L-threonine 3-dehydrogenase OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=tdh PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.161e-13 Identity = 48/162 (29.63%), Postives = 87/162 (53.70%), Query Frame = 1 Query: 7 GAPRIVIVDVDDYRLSVAKKLGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHREMTVPLTPAAAREVDVVGVFRYK--NTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGTAIKVMFN 483 GA +VI DV++YRL +A+K+G V V+ NL+D+ E+ M G DV + +G T L GG++ ++G+ +M++ T + + + G++ + TW ++SG +D+ P+ITHR FS + ++ F+ + R G + KV+ + Sbjct: 187 GARNVVITDVNEYRLELARKMGITRAVNVAKENLEDVMAEL-----GMTEGFDVGLEMSGAPAAFRTMLDTMNHGGRIAMLGIPPSDMSIDWTKVIFKGLFIKGIYGREMFETWYKMAALIQSG-LDLSPIITHR--FSIDDFQKGFD-AMRSGQSGKVILS 339
BLAST of CX300644 vs. ExPASy Swiss-Prot
Match: TDH_YERE8 (L-threonine 3-dehydrogenase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=tdh PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 8.047e-13 Identity = 48/162 (29.63%), Postives = 86/162 (53.09%), Query Frame = 1 Query: 7 GAPRIVIVDVDDYRLSVAKKLGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHREMTVPLTPAAAREVDVVGVFRYK--NTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGTAIKVMFN 483 GA +VI DV++YRL +A+K+G V V+ NL D+ E+ M G DV + +G L++ GG++ ++G+ +M++ + + + G++ + TW ++SG +D+ P+ITHR FS E ++ F+ + R G + KV+ N Sbjct: 187 GARHVVITDVNEYRLDLARKMGVTRAVNVNKENLNDVMAEL-----GMTEGFDVGLEMSGAPPAFRALLNSMNHGGRIAMLGIPPSDMSIDWNQVIFKGLFIKGIYGREMFETWYKMAALIQSG-LDLTPIITHR--FSIDEFQQGFD-AMRSGKSGKVILN 339
BLAST of CX300644 vs. ExPASy Swiss-Prot
Match: TDH_SHISS (L-threonine 3-dehydrogenase OS=Shigella sonnei (strain Ss046) GN=tdh PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 8.047e-13 Identity = 47/162 (29.01%), Postives = 86/162 (53.09%), Query Frame = 1 Query: 7 GAPRIVIVDVDDYRLSVAKKLGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHREMTVPLTPAAAREVDVVGVFRYK--NTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGTAIKVMFN 483 GA +VI DV++YRL +A+K+G V V+ NL D+ E+ M G D+ + +G T L GG++ ++G+ +M++ T + + + G++ + TW ++SG +D+ P+ITHR FS + ++ F+ + R G + KV+ + Sbjct: 187 GARNVVITDVNEYRLELARKMGITRAVNVAKENLNDVMAEL-----GMAEGFDIGLEMSGAPPAFRTMLDTMNHGGRIAMLGIPPSDMSIDWTKVIFKGLFIKGIYGREMFETWYKMAALIQSG-LDLSPIITHR--FSIDDFQKGFD-AMRSGQSGKVILS 339 The following BLAST results are available for this feature:
BLAST of CX300644 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 166
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300644 ID=CX300644; Name=CX300644; organism=Citrus clementina; type=EST; length=660bpback to top |