CX300644
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300644 vs. ExPASy Swiss-Prot
Match: TDH_PROMH (L-threonine 3-dehydrogenase OS=Proteus mirabilis (strain HI4320) GN=tdh PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 8.047e-13 Identity = 50/162 (30.86%), Postives = 84/162 (51.85%), Query Frame = 1 Query: 7 GAPRIVIVDVDDYRLSVAKKLGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHREMTVPLTPAAAREVDVVGVFRYK--NTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGTAIKVMFN 483 GA +VI DV++YRL +AKK+G V VS NL D+ +E+ M G DV + +G T LS GG++ L+G+ +M + + + + G++ + TW ++SG +D+ P+ITH+F E ++ F+ R G + KV+ + Sbjct: 187 GARHVVITDVNEYRLDLAKKMGVTRAVNVSKENLTDVMKEL-----GMTEGFDVGLEMSGAPPAFRTMLSTMNHGGRIALLGIPPSDMAIDWGQVIFKGLFIKGIYGREMFETWYKMAALIQSG-LDLSPIITHQFPID--EFQKGFDI-MRSGQSGKVILD 339
BLAST of CX300644 vs. ExPASy Swiss-Prot
Match: TDH_ECOLU (L-threonine 3-dehydrogenase OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=tdh PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 8.047e-13 Identity = 48/162 (29.63%), Postives = 86/162 (53.09%), Query Frame = 1 Query: 7 GAPRIVIVDVDDYRLSVAKKLGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHREMTVPLTPAAAREVDVVGVFRYK--NTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGTAIKVMFN 483 GA +VI DV++YRL +A+K+G V V+ NL D+ E+ M G DV + +G T L GG++ ++G+ +M++ T + + + G++ + TW ++SG +D+ P+ITHR FS + ++ F+ + R G + KV+ + Sbjct: 187 GARNVVITDVNEYRLELARKMGVTRAVNVAKENLNDVMAEL-----GMTEGFDVGLEMSGAPPAFRTMLDTMNHGGRIAMLGIPPSDMSIDWTKVIFKGLFIKGIYGREMFETWYKMAALIQSG-LDLSPIITHR--FSIDDFQKGFD-AMRSGQSGKVILS 339
BLAST of CX300644 vs. ExPASy Swiss-Prot
Match: XYLD_MORMO (D-xylulose reductase OS=Morganella morganii PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.051e-12 Identity = 48/150 (32.00%), Postives = 80/150 (53.33%), Query Frame = 1 Query: 1 AFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHREMTVPLTPAAAREVDVVGVFRYKNTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSA 450 A G ++I DV D +L VA+K + V S + Q +A++V ++ G G++V F+C+G +++ GG LVGM + + A A+EV + RY N +P + L SGK++V PL++ + F K+ EA+E +A Sbjct: 188 AGGCSDVIICDVFDEKLKVAEKYQGLHAVN-SKDQQALADKVRELTG--GEGVNVLFECSGAKPVIASISDHIAPGGTAVLVGMPIDPAPLDIVAAQAKEVTFKTILRYANMYPRTIRLLSSGKLNVAPLLSATYKF--KDSVEAYERAA 332
BLAST of CX300644 vs. ExPASy Swiss-Prot
Match: TDH_SHIFL (L-threonine 3-dehydrogenase OS=Shigella flexneri GN=tdh PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.051e-12 Identity = 48/162 (29.63%), Postives = 86/162 (53.09%), Query Frame = 1 Query: 7 GAPRIVIVDVDDYRLSVAKKLGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHREMTVPLTPAAAREVDVVGVFRYK--NTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGTAIKVMFN 483 GA +VI DV++YRL +A+K+G V V+ NL D+ E+ M G DV + +G T L GG++ ++G+ +M++ T + + + G++ + TW ++SG +D+ P+ITHR FS + ++ F+ + R G + KV+ + Sbjct: 187 GARNVVITDVNEYRLELARKMGITRAVNVAKENLNDVMAEL-----GMTEGFDVGLEMSGAPPAFRTMLDTMNHGGRIAMLGIPPSDMSIDWTKVIFKGLFIKGIYGREMFETWYKMAALIQSG-LDLSPIITHR--FSIDDFQKGFD-AMRSGQSGKVILS 339
BLAST of CX300644 vs. ExPASy Swiss-Prot
Match: TDH_SHIF8 (L-threonine 3-dehydrogenase OS=Shigella flexneri serotype 5b (strain 8401) GN=tdh PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.051e-12 Identity = 48/162 (29.63%), Postives = 86/162 (53.09%), Query Frame = 1 Query: 7 GAPRIVIVDVDDYRLSVAKKLGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHREMTVPLTPAAAREVDVVGVFRYK--NTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGTAIKVMFN 483 GA +VI DV++YRL +A+K+G V V+ NL D+ E+ M G DV + +G T L GG++ ++G+ +M++ T + + + G++ + TW ++SG +D+ P+ITHR FS + ++ F+ + R G + KV+ + Sbjct: 187 GARNVVITDVNEYRLELARKMGITRAVNVAKENLNDVMAEL-----GMTEGFDVGLEMSGAPPAFRTMLDTMNHGGRIAMLGIPPSDMSIDWTKVIFKGLFIKGIYGREMFETWYKMAALIQSG-LDLSPIITHR--FSIDDFQKGFD-AMRSGQSGKVILS 339
BLAST of CX300644 vs. ExPASy Swiss-Prot
Match: TDH_SHIBS (L-threonine 3-dehydrogenase OS=Shigella boydii serotype 4 (strain Sb227) GN=tdh PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.051e-12 Identity = 48/162 (29.63%), Postives = 86/162 (53.09%), Query Frame = 1 Query: 7 GAPRIVIVDVDDYRLSVAKKLGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHREMTVPLTPAAAREVDVVGVFRYK--NTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGTAIKVMFN 483 GA +VI DV++YRL +A+K+G V V+ NL D+ E+ M G DV + +G T L GG++ ++G+ +M++ T + + + G++ + TW ++SG +D+ P+ITHR FS + ++ F+ + R G + KV+ + Sbjct: 187 GARNVVITDVNEYRLELARKMGITRAVNVAKENLNDVMAEL-----GMTEGFDVGLEMSGAPPAFRTMLDTMNHGGRIAMLGIPPSDMSIDWTKVIFKGLFIKGIYGREMFETWYKMAALIQSG-LDLSPIITHR--FSIDDFQKGFD-AMRSGQSGKVILS 339
BLAST of CX300644 vs. ExPASy Swiss-Prot
Match: TDH_SHIB3 (L-threonine 3-dehydrogenase OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=tdh PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.051e-12 Identity = 48/162 (29.63%), Postives = 86/162 (53.09%), Query Frame = 1 Query: 7 GAPRIVIVDVDDYRLSVAKKLGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHREMTVPLTPAAAREVDVVGVFRYK--NTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGTAIKVMFN 483 GA +VI DV++YRL +A+K+G V V+ NL D+ E+ M G DV + +G T L GG++ ++G+ +M++ T + + + G++ + TW ++SG +D+ P+ITHR FS + ++ F+ + R G + KV+ + Sbjct: 187 GARNVVITDVNEYRLELARKMGITRAVNVAKENLNDVMAEL-----GMTEGFDVGLEMSGAPPAFRTMLDTMNHGGRIAMLGIPPSDMSIDWTKVIFKGLFIKGIYGREMFETWYKMAALIQSG-LDLSPIITHR--FSIDDFQKGFD-AMRSGQSGKVILS 339
BLAST of CX300644 vs. ExPASy Swiss-Prot
Match: TDH_SHEPC (L-threonine 3-dehydrogenase OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=tdh PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.051e-12 Identity = 45/153 (29.41%), Postives = 78/153 (50.98%), Query Frame = 1 Query: 7 GAPRIVIVDVDDYRLSVAKKLGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHREMTVPLTPAAAREVDVVGVFRYK--NTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARG 456 GA +VI DV++YRL +A+K+GA V VS NL+D+ +E+ M G DV + +G L GGKV ++G+ EM + + + + + G++ + TW ++SG +D+ P+ITH + + ++ F+ G Sbjct: 187 GARHVVITDVNEYRLELARKMGATRAVNVSKENLKDVMKEL-----GMTEGFDVGLEMSGVPSAFHAMLDTMNHGGKVAMLGIPGGEMAIDWSKVIFKGLVIKGIYGREMFETWYKMASLIQSG-LDISPIITHHYKID--DFQKGFDAMGSG 331
BLAST of CX300644 vs. ExPASy Swiss-Prot
Match: TDH_ENTS8 (L-threonine 3-dehydrogenase OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=tdh PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.051e-12 Identity = 47/162 (29.01%), Postives = 86/162 (53.09%), Query Frame = 1 Query: 7 GAPRIVIVDVDDYRLSVAKKLGADNIVKVST-NLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHREMTVPLTPAAAREVDVVGVFRYK--NTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGTAIKVMFN 483 GA +VI DV++YRLS+A+K+G V V+ +LQD+ E+ M G DV + +G T L GG++ ++G+ +M++ + + + G++ + TW ++SG +D+ P+ITHRF + ++ F+ + R G + KV+ + Sbjct: 187 GARNVVITDVNEYRLSLARKMGVTRAVNVANESLQDVMNEL-----GMTEGFDVGLEMSGAPPAFRTMLDTMNHGGRIAMLGIPPSDMSIDWNKVIFKGLFIKGIYGREMFETWYKMAALIQSG-LDLSPIITHRFTID--DFQKGFD-AMRSGQSGKVILS 339
BLAST of CX300644 vs. ExPASy Swiss-Prot
Match: TDH_ECOUT (L-threonine 3-dehydrogenase OS=Escherichia coli (strain UTI89 / UPEC) GN=tdh PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.051e-12 Identity = 48/162 (29.63%), Postives = 86/162 (53.09%), Query Frame = 1 Query: 7 GAPRIVIVDVDDYRLSVAKKLGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHREMTVPLTPAAAREVDVVGVFRYK--NTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGTAIKVMFN 483 GA +VI DV++YRL +A+K+G V V+ NL D+ E+ M G DV + +G T L GG++ ++G+ +M++ T + + + G++ + TW ++SG +D+ P+ITHR FS + ++ F+ + R G + KV+ + Sbjct: 187 GARNVVITDVNEYRLELARKMGITRAVNVAKENLNDVMTEL-----GMTEGFDVGLEMSGAPPAFRTMLDTMNHGGRIAMLGIPPSDMSIDWTKVIFKGLFIKGIYGREMFETWYKMAALIQSG-LDLSPIITHR--FSIDDFQKGFD-AMRSGQSGKVILS 339 The following BLAST results are available for this feature:
BLAST of CX300644 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 166
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300644 ID=CX300644; Name=CX300644; organism=Citrus clementina; type=EST; length=660bpback to top |