CX300644
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300644 vs. ExPASy Swiss-Prot
Match: TDH_FRATT (L-threonine 3-dehydrogenase OS=Francisella tularensis subsp. tularensis GN=tdh PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.373e-12 Identity = 46/156 (29.49%), Postives = 82/156 (52.56%), Query Frame = 1 Query: 7 GAPRIVIVDVDDYRLSVAKKLGADNIVKVS--TNLQDIAEEVEKIQKAMG--TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHREMTVPLTPAAAREVDVVGVFRYK--NTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARG 456 GA RIVI D+++YRL +A+ GA + V+ N ++ +++ K+ +G G DV + +G N +S L GGK+ L+G+ +++V + + + G++ + TW L L++G +D+ P+ITHR E ++ FE G Sbjct: 188 GARRIVITDINEYRLQMARDFGATVALNVAPFKNQDELVKQMRKVMSDIGMTEGFDVGLEMSGINSAISMMLDVMNHGGKLSLLGISAGDISVDWGAILFKGLTLKGIYGREMFETWYLMTSMLQAG-MDMNPIITHRLHID--EFQKGFEIMKSG 340
BLAST of CX300644 vs. ExPASy Swiss-Prot
Match: TDH_FRATO (L-threonine 3-dehydrogenase OS=Francisella tularensis subsp. holarctica (strain OSU18) GN=tdh PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.373e-12 Identity = 46/156 (29.49%), Postives = 82/156 (52.56%), Query Frame = 1 Query: 7 GAPRIVIVDVDDYRLSVAKKLGADNIVKVS--TNLQDIAEEVEKIQKAMG--TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHREMTVPLTPAAAREVDVVGVFRYK--NTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARG 456 GA RIVI D+++YRL +A+ GA + V+ N ++ +++ K+ +G G DV + +G N +S L GGK+ L+G+ +++V + + + G++ + TW L L++G +D+ P+ITHR E ++ FE G Sbjct: 188 GARRIVITDINEYRLQMARDFGATVALNVAPFKNQDELVKQMRKVMSDIGMTEGFDVGLEMSGINSAISMMLDVMNHGGKLSLLGISAGDISVDWGAILFKGLTLKGIYGREMFETWYLMTSMLQAG-MDMNPIITHRLHID--EFQKGFEIMKSG 340
BLAST of CX300644 vs. ExPASy Swiss-Prot
Match: TDH_FRATM (L-threonine 3-dehydrogenase OS=Francisella tularensis subsp. mediasiatica (strain FSC147) GN=tdh PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.373e-12 Identity = 46/156 (29.49%), Postives = 82/156 (52.56%), Query Frame = 1 Query: 7 GAPRIVIVDVDDYRLSVAKKLGADNIVKVS--TNLQDIAEEVEKIQKAMG--TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHREMTVPLTPAAAREVDVVGVFRYK--NTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARG 456 GA RIVI D+++YRL +A+ GA + V+ N ++ +++ K+ +G G DV + +G N +S L GGK+ L+G+ +++V + + + G++ + TW L L++G +D+ P+ITHR E ++ FE G Sbjct: 188 GARRIVITDINEYRLQMARDFGATVALNVAPFKNQDELVKQMRKVMSDIGMTEGFDVGLEMSGINSAISMMLDVMNHGGKLSLLGISAGDISVDWGAILFKGLTLKGIYGREMFETWYLMTSMLQAG-MDMNPIITHRLHID--EFQKGFEIMKSG 340
BLAST of CX300644 vs. ExPASy Swiss-Prot
Match: TDH_FRATH (L-threonine 3-dehydrogenase OS=Francisella tularensis subsp. holarctica (strain LVS) GN=tdh PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.373e-12 Identity = 46/156 (29.49%), Postives = 82/156 (52.56%), Query Frame = 1 Query: 7 GAPRIVIVDVDDYRLSVAKKLGADNIVKVS--TNLQDIAEEVEKIQKAMG--TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHREMTVPLTPAAAREVDVVGVFRYK--NTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARG 456 GA RIVI D+++YRL +A+ GA + V+ N ++ +++ K+ +G G DV + +G N +S L GGK+ L+G+ +++V + + + G++ + TW L L++G +D+ P+ITHR E ++ FE G Sbjct: 188 GARRIVITDINEYRLQMARDFGATVALNVAPFKNQDELVKQMRKVMSDIGMTEGFDVGLEMSGINSAISMMLDVMNHGGKLSLLGISAGDISVDWGAILFKGLTLKGIYGREMFETWYLMTSMLQAG-MDMNPIITHRLHID--EFQKGFEIMKSG 340
BLAST of CX300644 vs. ExPASy Swiss-Prot
Match: TDH_FRATF (L-threonine 3-dehydrogenase OS=Francisella tularensis subsp. holarctica (strain FTNF002-00 / FTA) GN=tdh PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.373e-12 Identity = 46/156 (29.49%), Postives = 82/156 (52.56%), Query Frame = 1 Query: 7 GAPRIVIVDVDDYRLSVAKKLGADNIVKVS--TNLQDIAEEVEKIQKAMG--TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHREMTVPLTPAAAREVDVVGVFRYK--NTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARG 456 GA RIVI D+++YRL +A+ GA + V+ N ++ +++ K+ +G G DV + +G N +S L GGK+ L+G+ +++V + + + G++ + TW L L++G +D+ P+ITHR E ++ FE G Sbjct: 188 GARRIVITDINEYRLQMARDFGATVALNVAPFKNQDELVKQMRKVMSDIGMTEGFDVGLEMSGINSAISMMLDVMNHGGKLSLLGISAGDISVDWGAILFKGLTLKGIYGREMFETWYLMTSMLQAG-MDMNPIITHRLHID--EFQKGFEIMKSG 340
BLAST of CX300644 vs. ExPASy Swiss-Prot
Match: TDH_FRAT1 (L-threonine 3-dehydrogenase OS=Francisella tularensis subsp. tularensis (strain FSC 198) GN=tdh PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.373e-12 Identity = 46/156 (29.49%), Postives = 82/156 (52.56%), Query Frame = 1 Query: 7 GAPRIVIVDVDDYRLSVAKKLGADNIVKVS--TNLQDIAEEVEKIQKAMG--TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHREMTVPLTPAAAREVDVVGVFRYK--NTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARG 456 GA RIVI D+++YRL +A+ GA + V+ N ++ +++ K+ +G G DV + +G N +S L GGK+ L+G+ +++V + + + G++ + TW L L++G +D+ P+ITHR E ++ FE G Sbjct: 188 GARRIVITDINEYRLQMARDFGATVALNVAPFKNQDELVKQMRKVMSDIGMTEGFDVGLEMSGINSAISMMLDVMNHGGKLSLLGISAGDISVDWGAILFKGLTLKGIYGREMFETWYLMTSMLQAG-MDMNPIITHRLHID--EFQKGFEIMKSG 340
BLAST of CX300644 vs. ExPASy Swiss-Prot
Match: TDH_YERPY (L-threonine 3-dehydrogenase OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=tdh PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.793e-12 Identity = 47/162 (29.01%), Postives = 86/162 (53.09%), Query Frame = 1 Query: 7 GAPRIVIVDVDDYRLSVAKKLGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHREMTVPLTPAAAREVDVVGVFRYK--NTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGTAIKVMFN 483 GA +VI DV++YRL +A+K+G V VS NL D+ E+ M G DV + +G + L++ GG++ ++G+ +M++ + + + G++ + TW ++SG +D+ P+ITHRF E ++ F+ + R G + KV+ + Sbjct: 187 GARHVVITDVNEYRLDLARKMGVTRAVNVSKENLNDVMTEL-----GMTEGFDVGLEMSGAPPAFRSLLNSMNHGGRIAMLGIPPSDMSIDWNQVIFKGLFIKGIYGREMFETWYKMAALIQSG-LDLTPIITHRFPID--EFQQGFD-AMRSGKSGKVVLS 339
BLAST of CX300644 vs. ExPASy Swiss-Prot
Match: TDH_YERPS (L-threonine 3-dehydrogenase OS=Yersinia pseudotuberculosis GN=tdh PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.793e-12 Identity = 47/162 (29.01%), Postives = 86/162 (53.09%), Query Frame = 1 Query: 7 GAPRIVIVDVDDYRLSVAKKLGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHREMTVPLTPAAAREVDVVGVFRYK--NTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGTAIKVMFN 483 GA +VI DV++YRL +A+K+G V VS NL D+ E+ M G DV + +G + L++ GG++ ++G+ +M++ + + + G++ + TW ++SG +D+ P+ITHRF E ++ F+ + R G + KV+ + Sbjct: 187 GARHVVITDVNEYRLDLARKMGVTRAVNVSKENLNDVMTEL-----GMTEGFDVGLEMSGAPPAFRSLLNSMNHGGRIAMLGIPPSDMSIDWNQVIFKGLFIKGIYGREMFETWYKMAALIQSG-LDLTPIITHRFPID--EFQQGFD-AMRSGKSGKVVLS 339
BLAST of CX300644 vs. ExPASy Swiss-Prot
Match: TDH_YERPP (L-threonine 3-dehydrogenase OS=Yersinia pestis (strain Pestoides F) GN=tdh PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.793e-12 Identity = 47/162 (29.01%), Postives = 86/162 (53.09%), Query Frame = 1 Query: 7 GAPRIVIVDVDDYRLSVAKKLGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHREMTVPLTPAAAREVDVVGVFRYK--NTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGTAIKVMFN 483 GA +VI DV++YRL +A+K+G V VS NL D+ E+ M G DV + +G + L++ GG++ ++G+ +M++ + + + G++ + TW ++SG +D+ P+ITHRF E ++ F+ + R G + KV+ + Sbjct: 187 GARHVVIADVNEYRLDLARKMGVTRAVNVSKENLNDVMTEL-----GMTEGFDVGLEMSGAPPAFRSLLNSMNHGGRIAMLGIPPSDMSIDWNQVIFKGLFIKGIYGREMFETWYKMAALIQSG-LDLTPIITHRFPID--EFQQGFD-AMRSGKSGKVVLS 339
BLAST of CX300644 vs. ExPASy Swiss-Prot
Match: TDH_YERPN (L-threonine 3-dehydrogenase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=tdh PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.793e-12 Identity = 47/162 (29.01%), Postives = 86/162 (53.09%), Query Frame = 1 Query: 7 GAPRIVIVDVDDYRLSVAKKLGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHREMTVPLTPAAAREVDVVGVFRYK--NTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGTAIKVMFN 483 GA +VI DV++YRL +A+K+G V VS NL D+ E+ M G DV + +G + L++ GG++ ++G+ +M++ + + + G++ + TW ++SG +D+ P+ITHRF E ++ F+ + R G + KV+ + Sbjct: 187 GARHVVIADVNEYRLDLARKMGVTRAVNVSKENLNDVMTEL-----GMTEGFDVGLEMSGAPPAFRSLLNSMNHGGRIAMLGIPPSDMSIDWNQVIFKGLFIKGIYGREMFETWYKMAALIQSG-LDLTPIITHRFPID--EFQQGFD-AMRSGKSGKVVLS 339 The following BLAST results are available for this feature:
BLAST of CX300644 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 166
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300644 ID=CX300644; Name=CX300644; organism=Citrus clementina; type=EST; length=660bpback to top |