CX300644
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300644 vs. ExPASy Swiss-Prot
Match: TDH_YERPG (L-threonine 3-dehydrogenase OS=Yersinia pestis bv. Antiqua (strain Angola) GN=tdh PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.793e-12 Identity = 47/162 (29.01%), Postives = 86/162 (53.09%), Query Frame = 1 Query: 7 GAPRIVIVDVDDYRLSVAKKLGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHREMTVPLTPAAAREVDVVGVFRYK--NTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGTAIKVMFN 483 GA +VI DV++YRL +A+K+G V VS NL D+ E+ M G DV + +G + L++ GG++ ++G+ +M++ + + + G++ + TW ++SG +D+ P+ITHRF E ++ F+ + R G + KV+ + Sbjct: 187 GARHVVIADVNEYRLDLARKMGVTRAVNVSKENLNDVMTEL-----GMTEGFDVGLEMSGAPPAFRSLLNSMNHGGRIAMLGIPPSDMSIDWNQVIFKGLFIKGIYGREMFETWYKMAALIQSG-LDLTPIITHRFPID--EFQQGFD-AMRSGKSGKVVLS 339
BLAST of CX300644 vs. ExPASy Swiss-Prot
Match: TDH_YERPE (L-threonine 3-dehydrogenase OS=Yersinia pestis GN=tdh PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.793e-12 Identity = 47/162 (29.01%), Postives = 86/162 (53.09%), Query Frame = 1 Query: 7 GAPRIVIVDVDDYRLSVAKKLGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHREMTVPLTPAAAREVDVVGVFRYK--NTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGTAIKVMFN 483 GA +VI DV++YRL +A+K+G V VS NL D+ E+ M G DV + +G + L++ GG++ ++G+ +M++ + + + G++ + TW ++SG +D+ P+ITHRF E ++ F+ + R G + KV+ + Sbjct: 187 GARHVVIADVNEYRLDLARKMGVTRAVNVSKENLNDVMTEL-----GMTEGFDVGLEMSGAPPAFRSLLNSMNHGGRIAMLGIPPSDMSIDWNQVIFKGLFIKGIYGREMFETWYKMAALIQSG-LDLTPIITHRFPID--EFQQGFD-AMRSGKSGKVVLS 339
BLAST of CX300644 vs. ExPASy Swiss-Prot
Match: TDH_YERPB (L-threonine 3-dehydrogenase OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=tdh PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.793e-12 Identity = 47/162 (29.01%), Postives = 86/162 (53.09%), Query Frame = 1 Query: 7 GAPRIVIVDVDDYRLSVAKKLGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHREMTVPLTPAAAREVDVVGVFRYK--NTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGTAIKVMFN 483 GA +VI DV++YRL +A+K+G V VS NL D+ E+ M G DV + +G + L++ GG++ ++G+ +M++ + + + G++ + TW ++SG +D+ P+ITHRF E ++ F+ + R G + KV+ + Sbjct: 187 GARHVVITDVNEYRLDLARKMGVTRAVNVSKENLNDVMTEL-----GMTEGFDVGLEMSGAPPAFRSLLNSMNHGGRIAMLGIPPSDMSIDWNQVIFKGLFIKGIYGREMFETWYKMAALIQSG-LDLTPIITHRFPID--EFQQGFD-AMRSGKSGKVVLS 339
BLAST of CX300644 vs. ExPASy Swiss-Prot
Match: TDH_YERPA (L-threonine 3-dehydrogenase OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=tdh PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.793e-12 Identity = 47/162 (29.01%), Postives = 86/162 (53.09%), Query Frame = 1 Query: 7 GAPRIVIVDVDDYRLSVAKKLGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHREMTVPLTPAAAREVDVVGVFRYK--NTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGTAIKVMFN 483 GA +VI DV++YRL +A+K+G V VS NL D+ E+ M G DV + +G + L++ GG++ ++G+ +M++ + + + G++ + TW ++SG +D+ P+ITHRF E ++ F+ + R G + KV+ + Sbjct: 187 GARHVVIADVNEYRLDLARKMGVTRAVNVSKENLNDVMTEL-----GMTEGFDVGLEMSGAPPAFRSLLNSMNHGGRIAMLGIPPSDMSIDWNQVIFKGLFIKGIYGREMFETWYKMAALIQSG-LDLTPIITHRFPID--EFQQGFD-AMRSGKSGKVVLS 339
BLAST of CX300644 vs. ExPASy Swiss-Prot
Match: TDH_YERP3 (L-threonine 3-dehydrogenase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=tdh PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.793e-12 Identity = 47/162 (29.01%), Postives = 86/162 (53.09%), Query Frame = 1 Query: 7 GAPRIVIVDVDDYRLSVAKKLGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHREMTVPLTPAAAREVDVVGVFRYK--NTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGTAIKVMFN 483 GA +VI DV++YRL +A+K+G V VS NL D+ E+ M G DV + +G + L++ GG++ ++G+ +M++ + + + G++ + TW ++SG +D+ P+ITHRF E ++ F+ + R G + KV+ + Sbjct: 187 GARHVVITDVNEYRLDLARKMGVTRAVNVSKENLNDVMTEL-----GMTEGFDVGLEMSGAPPAFRSLLNSMNHGGRIAMLGIPPSDMSIDWNQVIFKGLFIKGIYGREMFETWYKMAALIQSG-LDLTPIITHRFPID--EFQQGFD-AMRSGKSGKVVLS 339
BLAST of CX300644 vs. ExPASy Swiss-Prot
Match: TDH_SHEWM (L-threonine 3-dehydrogenase OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=tdh PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.793e-12 Identity = 47/162 (29.01%), Postives = 85/162 (52.47%), Query Frame = 1 Query: 7 GAPRIVIVDVDDYRLSVAKKLGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHREMTVPLTPAAAREVDVVGVFRYK--NTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGTAIKVMFN 483 GA +VI DV++YRL +A+K+GA V V+ +L+D+ E+ M G DV + +G + L GGKV ++G+ +M + + + + + G++ + TW ++SG +D+ P+ITH + E ++ F+ + R G + KV+ N Sbjct: 187 GARHVVITDVNEYRLELAQKMGATRAVNVAKEDLKDVMSEL-----GMTEGFDVGLEMSGVPSAFHSMLDTMNHGGKVAMLGIPGGDMAIDWSKVIFKGLIIKGIYGREMFETWYKMASLIQSG-LDISPIITHH--YKVDEFQQGFD-AMRSGQSGKVILN 339
BLAST of CX300644 vs. ExPASy Swiss-Prot
Match: TDH_SHESW (L-threonine 3-dehydrogenase OS=Shewanella sp. (strain W3-18-1) GN=tdh PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.793e-12 Identity = 44/153 (28.76%), Postives = 78/153 (50.98%), Query Frame = 1 Query: 7 GAPRIVIVDVDDYRLSVAKKLGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHREMTVPLTPAAAREVDVVGVFRYK--NTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARG 456 GA +VI DV++YRL +A+K+GA V VS +L+D+ +E+ M G DV + +G L GGK+ ++G+ EM + + + + + G++ + TW ++SG +D+ P+ITH F + ++ F+ G Sbjct: 187 GARHVVITDVNEYRLELARKMGATRAVNVSKESLKDVMKEL-----GMTEGFDVGLEMSGVPSAFHAMLDTMNHGGKIAMLGIPGGEMAIDWSKVIFKGLVIKGIYGREMFETWYKMASLIQSG-LDISPIITHHFKID--DFQQGFDAMGSG 331
BLAST of CX300644 vs. ExPASy Swiss-Prot
Match: TDH_RHILW (L-threonine 3-dehydrogenase OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=tdh PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.793e-12 Identity = 44/160 (27.50%), Postives = 81/160 (50.62%), Query Frame = 1 Query: 7 GAPRIVIVDVDDYRLSVAKKLGADNIVKVST-NLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHREMTVPLTPAAAREVDVVGVFRYK--NTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGTAIKVM 477 GA ++VI D++ +RL++A+KLG D++V S+ NL D+ + + M G DV + +G + GGK+ ++G+ + + +++ G++ + TW + F++ G +D+ P+ITHR G E + FE G + VM Sbjct: 191 GARKVVITDINPHRLALARKLGIDHVVDASSENLADVMKSI-----GMTEGFDVGLEMSGAAPAFRDMIDKMNNGGKIAILGIAPAGFEIDWNKVIFKMLNLKGIYGREMFETWYKMIAFVQGG-LDLAPIITHRIGID--EFRDGFEAMRSGNSGKVVM 342
BLAST of CX300644 vs. ExPASy Swiss-Prot
Match: TDH_PYRHO (Probable L-threonine 3-dehydrogenase OS=Pyrococcus horikoshii GN=tdh PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.793e-12 Identity = 52/166 (31.33%), Postives = 87/166 (52.41%), Query Frame = 1 Query: 1 AFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHREMTVPLTPAAA-REVDVVGVF--RYKNTWPLCLEFLRSGKIDVKPLITHRF-GFSQKEVEEAFETSARGGTAIKVMFNL 486 A GA +++ + D+R +AKK+GAD ++ +D+ +EV I G G+DV + +G K + L A G+V L+G+ ++T+ + + + G+ TW L+SGK+++ P+ITH++ GF + EEAFE G T KV+F L Sbjct: 189 ASGAYPVIVSEPSDFRRELAKKVGADYVINPFE--EDVVKEVMDITD--GNGVDVFLEFSGAPKALEQGLQAVTPAGRVSLLGLYPGKVTIDFNNLIIFKALTIYGITGRHLWETWYTVSRLLQSGKLNLDPIITHKYKGFD--KYEEAFELMRAGKTG-KVVFML 347
BLAST of CX300644 vs. ExPASy Swiss-Prot
Match: TDH_PECCP (L-threonine 3-dehydrogenase OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=tdh PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.793e-12 Identity = 48/162 (29.63%), Postives = 83/162 (51.23%), Query Frame = 1 Query: 7 GAPRIVIVDVDDYRLSVAKKLGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHREMTVPLTPAAAREVDVVGVFRYK--NTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGTAIKVMFN 483 GA +VI DV+ YRL +A+K+GA V V+ L D+ I+ M G D+ + +G L A GG++ ++G+ H M++ + + + G++ + TW ++SG +D+ P+ITHRF E ++ F+ + R G + KV+ N Sbjct: 187 GARNVVITDVNAYRLDLARKMGATRAVNVAEERLADV-----MIELGMTEGFDIGLEMSGAPSAFRAMLKAMNHGGRIAMLGIPHEPMSIDWGEVIFKGLFIKGIYGREMFETWYKMSALIQSG-LDLSPIITHRFHID--EFQKGFD-AMRSGQSGKVILN 339 The following BLAST results are available for this feature:
BLAST of CX300644 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 166
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300644 ID=CX300644; Name=CX300644; organism=Citrus clementina; type=EST; length=660bpback to top |