CX300659
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300659 vs. ExPASy Swiss-Prot
Match: H2B_GIBZE (Histone H2B OS=Gibberella zeae GN=HTB1 PE=3 SV=3) HSP 1 Score: 83.1889 bits (204), Expect = 1.339e-15 Identity = 43/78 (55.13%), Postives = 55/78 (70.51%), Query Frame = 2 Query: 212 ETYKNYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLGKVQ*EADDYIFGKFRPL*DLYFPGELAKHAV 445 ETY +YI+KVLKQVHPD GIS++AM I+NSF+NDIFE++A EAS+L + + + L PGELAKHAV Sbjct: 46 ETYSSYIYKVLKQVHPDTGISNRAMSILNSFVNDIFERVASEASKLAAYN-KKSTISSREIQTSVRLILPGELAKHAV 122
BLAST of CX300659 vs. ExPASy Swiss-Prot
Match: H2BL1_PSAMI (Late histone H2B.2.1 OS=Psammechinus miliaris PE=3 SV=2) HSP 1 Score: 83.1889 bits (204), Expect = 1.339e-15 Identity = 45/78 (57.69%), Postives = 54/78 (69.23%), Query Frame = 2 Query: 212 ETYKNYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLGKVQ*EADDYIFGKFRPL*DLYFPGELAKHAV 445 E+Y YI+KVLKQVHPD GISSKAM IMNSF+ND+FE++A EASRL + + + L PGELAKHAV Sbjct: 34 ESYGIYIYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYN-KKSTISSREVQTAVRLLLPGELAKHAV 110
BLAST of CX300659 vs. ExPASy Swiss-Prot
Match: H2B2_CAEEL (Histone H2B 2 OS=Caenorhabditis elegans GN=his-4 PE=1 SV=3) HSP 1 Score: 83.1889 bits (204), Expect = 1.339e-15 Identity = 43/78 (55.13%), Postives = 54/78 (69.23%), Query Frame = 2 Query: 212 ETYKNYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLGKVQ*EADDYIFGKFRPL*DLYFPGELAKHAV 445 E+Y YI++VLKQVHPD G+SSKAM IMNSF+ND+FE++A EASRL + + + L PGELAKHAV Sbjct: 33 ESYSVYIYRVLKQVHPDTGVSSKAMSIMNSFVNDVFERIAAEASRLAHYN-KRSTISSREIQTAVRLILPGELAKHAV 109
BLAST of CX300659 vs. ExPASy Swiss-Prot
Match: H2B1_CAEEL (Histone H2B 1 OS=Caenorhabditis elegans GN=his-11 PE=1 SV=4) HSP 1 Score: 83.1889 bits (204), Expect = 1.339e-15 Identity = 43/78 (55.13%), Postives = 54/78 (69.23%), Query Frame = 2 Query: 212 ETYKNYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLGKVQ*EADDYIFGKFRPL*DLYFPGELAKHAV 445 E+Y YI++VLKQVHPD G+SSKAM IMNSF+ND+FE++A EASRL + + + L PGELAKHAV Sbjct: 32 ESYSVYIYRVLKQVHPDTGVSSKAMSIMNSFVNDVFERIAAEASRLAHYN-KRSTISSREIQTAVRLILPGELAKHAV 108
BLAST of CX300659 vs. ExPASy Swiss-Prot
Match: H2B1A_HUMAN (Histone H2B type 1-A OS=Homo sapiens GN=HIST1H2BA PE=1 SV=3) HSP 1 Score: 83.1889 bits (204), Expect = 1.339e-15 Identity = 45/78 (57.69%), Postives = 53/78 (67.95%), Query Frame = 2 Query: 212 ETYKNYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLGKVQ*EADDYIFGKFRPL*DLYFPGELAKHAV 445 E+Y YI+KVLKQVHPD GISSKAM IMNSF+ DIFE++A EASRL + + + L PGELAKHAV Sbjct: 37 ESYSIYIYKVLKQVHPDTGISSKAMSIMNSFVTDIFERIASEASRLAHYS-KRSTISSREIQTAVRLLLPGELAKHAV 113
BLAST of CX300659 vs. ExPASy Swiss-Prot
Match: H2BS2_PSAMI (Histone H2B.2, sperm OS=Psammechinus miliaris PE=1 SV=3) HSP 1 Score: 80.1073 bits (196), Expect = 1.503e-15 Identity = 42/78 (53.85%), Postives = 52/78 (66.67%), Query Frame = 2 Query: 212 ETYKNYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLGKVQ*EADDYIFGKFRPL*DLYFPGELAKHAV 445 E+Y YI+KVLKQVHPD GISS+ M +MNSF+ND+FE++A EASRL + + L PGELAKHAV Sbjct: 52 ESYGIYIYKVLKQVHPDTGISSRGMSVMNSFVNDVFERIAGEASRLTSAN-RRSTISSREIQTAVRLLLPGELAKHAV 128 HSP 2 Score: 22.7126 bits (47), Expect = 1.503e-15 Identity = 9/10 (90.00%), Postives = 10/10 (100.00%), Query Frame = 3 Query: 450 EGTKAVTKFT 479 EGTKAVTK+T Sbjct: 130 EGTKAVTKYT 139
BLAST of CX300659 vs. ExPASy Swiss-Prot
Match: H2BS1_PSAMI (Histone H2B.1, sperm OS=Psammechinus miliaris PE=1 SV=3) HSP 1 Score: 80.1073 bits (196), Expect = 1.508e-15 Identity = 42/78 (53.85%), Postives = 53/78 (67.95%), Query Frame = 2 Query: 212 ETYKNYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLGKVQ*EADDYIFGKFRPL*DLYFPGELAKHAV 445 E+Y YI+KVLKQVHPD GISS+AM +MNSF+ND+FE++A EA RL + + + L PGELAKHAV Sbjct: 47 ESYGIYIYKVLKQVHPDTGISSRAMSVMNSFVNDVFERIASEAGRLTTYN-RRNTVSSREVQTAVRLLLPGELAKHAV 123 HSP 2 Score: 22.7126 bits (47), Expect = 1.508e-15 Identity = 9/10 (90.00%), Postives = 10/10 (100.00%), Query Frame = 3 Query: 450 EGTKAVTKFT 479 EGTKAVTK+T Sbjct: 125 EGTKAVTKYT 134
BLAST of CX300659 vs. ExPASy Swiss-Prot
Match: H2B_ROSNE (Histone H2B OS=Rosellinia necatrix GN=hh2b PE=3 SV=3) HSP 1 Score: 82.8037 bits (203), Expect = 1.748e-15 Identity = 43/78 (55.13%), Postives = 55/78 (70.51%), Query Frame = 2 Query: 212 ETYKNYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLGKVQ*EADDYIFGKFRPL*DLYFPGELAKHAV 445 ETY +YI+KVLKQVHPD GIS++AM I+NSF+NDIFE++A EAS+L + + + L PGELAKHAV Sbjct: 45 ETYSSYIYKVLKQVHPDTGISNRAMSILNSFVNDIFERVATEASKLAAYN-KKSTISSREIQTSVRLILPGELAKHAV 121
BLAST of CX300659 vs. ExPASy Swiss-Prot
Match: H2B_PODAN (Histone H2B OS=Podospora anserina GN=HTB1 PE=3 SV=3) HSP 1 Score: 82.8037 bits (203), Expect = 1.748e-15 Identity = 43/78 (55.13%), Postives = 55/78 (70.51%), Query Frame = 2 Query: 212 ETYKNYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLGKVQ*EADDYIFGKFRPL*DLYFPGELAKHAV 445 ETY +YI+KVLKQVHPD GIS++AM I+NSF+NDIFE++A EAS+L + + + L PGELAKHAV Sbjct: 46 ETYSSYIYKVLKQVHPDTGISNRAMSILNSFVNDIFERVATEASKLAAYN-KKSTISSREIQTSVRLILPGELAKHAV 122
BLAST of CX300659 vs. ExPASy Swiss-Prot
Match: H2B_NEUCR (Histone H2B OS=Neurospora crassa GN=hh2b PE=1 SV=4) HSP 1 Score: 82.8037 bits (203), Expect = 1.748e-15 Identity = 43/78 (55.13%), Postives = 55/78 (70.51%), Query Frame = 2 Query: 212 ETYKNYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLGKVQ*EADDYIFGKFRPL*DLYFPGELAKHAV 445 ETY +YI+KVLKQVHPD GIS++AM I+NSF+NDIFE++A EAS+L + + + L PGELAKHAV Sbjct: 46 ETYSSYIYKVLKQVHPDTGISNRAMSILNSFVNDIFERVATEASKLAAYN-KKSTISSREIQTSVRLILPGELAKHAV 122 The following BLAST results are available for this feature:
BLAST of CX300659 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 195
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300659 ID=CX300659; Name=CX300659; organism=Citrus clementina; type=EST; length=665bpback to top |