CX300659
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300659 vs. ExPASy Swiss-Prot
Match: H2B4_CHLRE (Histone H2B.4 OS=Chlamydomonas reinhardtii PE=1 SV=3) HSP 1 Score: 91.2781 bits (225), Expect = 4.916e-18 Identity = 49/80 (61.25%), Postives = 58/80 (72.50%), Query Frame = 2 Query: 206 SIETYKNYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLGKVQ*EADDYIFGKFRPL*DLYFPGELAKHAV 445 ++ETYK YI+KVLKQVHPD GISSKAM IMNSFINDIFEK+A EAS+L + + + + L PGELAKHAV Sbjct: 62 AVETYKLYIYKVLKQVHPDTGISSKAMSIMNSFINDIFEKVATEASKLSRYN-KKPTVTSREIQTAVRLVLPGELAKHAV 140
BLAST of CX300659 vs. ExPASy Swiss-Prot
Match: H2B3_CHLRE (Histone H2B.3 OS=Chlamydomonas reinhardtii PE=1 SV=3) HSP 1 Score: 91.2781 bits (225), Expect = 4.916e-18 Identity = 49/80 (61.25%), Postives = 58/80 (72.50%), Query Frame = 2 Query: 206 SIETYKNYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLGKVQ*EADDYIFGKFRPL*DLYFPGELAKHAV 445 ++ETYK YI+KVLKQVHPD GISSKAM IMNSFINDIFEK+A EAS+L + + + + L PGELAKHAV Sbjct: 62 AVETYKLYIYKVLKQVHPDTGISSKAMSIMNSFINDIFEKVATEASKLSRYN-KKPTVTSREIQTAVRLVLPGELAKHAV 140
BLAST of CX300659 vs. ExPASy Swiss-Prot
Match: H2B2_CHLRE (Histone H2B.2 OS=Chlamydomonas reinhardtii PE=1 SV=3) HSP 1 Score: 91.2781 bits (225), Expect = 4.916e-18 Identity = 49/80 (61.25%), Postives = 58/80 (72.50%), Query Frame = 2 Query: 206 SIETYKNYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLGKVQ*EADDYIFGKFRPL*DLYFPGELAKHAV 445 ++ETYK YI+KVLKQVHPD GISSKAM IMNSFINDIFEK+A EAS+L + + + + L PGELAKHAV Sbjct: 65 AVETYKLYIYKVLKQVHPDTGISSKAMSIMNSFINDIFEKVATEASKLSRYN-KKPTVTSREIQTAVRLVLPGELAKHAV 143
BLAST of CX300659 vs. ExPASy Swiss-Prot
Match: H2B1_CHLRE (Histone H2B.1 OS=Chlamydomonas reinhardtii GN=H2B PE=1 SV=3) HSP 1 Score: 91.2781 bits (225), Expect = 4.916e-18 Identity = 49/80 (61.25%), Postives = 58/80 (72.50%), Query Frame = 2 Query: 206 SIETYKNYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLGKVQ*EADDYIFGKFRPL*DLYFPGELAKHAV 445 ++ETYK YI+KVLKQVHPD GISSKAM IMNSFINDIFEK+A EAS+L + + + + L PGELAKHAV Sbjct: 62 AVETYKLYIYKVLKQVHPDTGISSKAMSIMNSFINDIFEKVATEASKLSRYN-KKPTVTSREIQTAVRLVLPGELAKHAV 140
BLAST of CX300659 vs. ExPASy Swiss-Prot
Match: H2B4_WHEAT (Histone H2B.4 OS=Triticum aestivum GN=TH153 PE=1 SV=3) HSP 1 Score: 90.5077 bits (223), Expect = 8.385e-18 Identity = 50/80 (62.50%), Postives = 58/80 (72.50%), Query Frame = 2 Query: 206 SIETYKNYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLGKVQ*EADDYIFGKFRPL*DLYFPGELAKHAV 445 S+ETYK YIFKVLKQVHPDIGISSKAM I NSFINDIFEKLA E+++L + + + + L PGELAKHAV Sbjct: 44 SMETYKIYIFKVLKQVHPDIGISSKAMSITNSFINDIFEKLAGESAKLARYN-KKPTITSREIQTSVRLVLPGELAKHAV 122
BLAST of CX300659 vs. ExPASy Swiss-Prot
Match: H2B4_VOLCA (Histone H2B.4 OS=Volvox carteri PE=3 SV=3) HSP 1 Score: 89.7373 bits (221), Expect = 1.430e-17 Identity = 49/78 (62.82%), Postives = 56/78 (71.79%), Query Frame = 2 Query: 212 ETYKNYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLGKVQ*EADDYIFGKFRPL*DLYFPGELAKHAV 445 ETYK YI+KVLKQVHPD GISSKAM IMNSFINDIFEK+A EAS+L + + + + L PGELAKHAV Sbjct: 66 ETYKLYIYKVLKQVHPDTGISSKAMSIMNSFINDIFEKVATEASKLSRYN-KKPTVTSREIQTAVRLVLPGELAKHAV 142
BLAST of CX300659 vs. ExPASy Swiss-Prot
Match: H2B3_VOLCA (Histone H2B.3 OS=Volvox carteri PE=3 SV=3) HSP 1 Score: 89.7373 bits (221), Expect = 1.430e-17 Identity = 49/78 (62.82%), Postives = 56/78 (71.79%), Query Frame = 2 Query: 212 ETYKNYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLGKVQ*EADDYIFGKFRPL*DLYFPGELAKHAV 445 ETYK YI+KVLKQVHPD GISSKAM IMNSFINDIFEK+A EAS+L + + + + L PGELAKHAV Sbjct: 68 ETYKLYIYKVLKQVHPDTGISSKAMSIMNSFINDIFEKVATEASKLSRYN-KKPTVTSREIQTAVRLVLPGELAKHAV 144
BLAST of CX300659 vs. ExPASy Swiss-Prot
Match: H2B_PEA (Histone H2B (Fragments) OS=Pisum sativum GN=HIS2B PE=1 SV=2) HSP 1 Score: 89.3521 bits (220), Expect = 1.868e-17 Identity = 50/77 (64.94%), Postives = 55/77 (71.43%), Query Frame = 2 Query: 215 TYKNYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLGKVQ*EADDYIFGKFRPL*DLYFPGELAKHAV 445 T K YIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA EASRL + + + + L PGE+AKH V Sbjct: 31 TVKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLASEASRLARYN-KKSTITPREIQTAVRLLLPGEVAKHKV 106
BLAST of CX300659 vs. ExPASy Swiss-Prot
Match: H2B1P_MOUSE (Histone H2B type 1-P OS=Mus musculus GN=Hist1h2bp PE=1 SV=3) HSP 1 Score: 87.8113 bits (216), Expect = 5.435e-17 Identity = 46/78 (58.97%), Postives = 55/78 (70.51%), Query Frame = 2 Query: 212 ETYKNYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLGKVQ*EADDYIFGKFRPL*DLYFPGELAKHAV 445 E+Y Y++KVLKQVHPD GISSKAMGIMNSF+NDIFE++A EASRL + + + L PGELAKHAV Sbjct: 36 ESYSVYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIASEASRLAHYN-KRSTITSREIQTAVRLLLPGELAKHAV 112
BLAST of CX300659 vs. ExPASy Swiss-Prot
Match: H2B1L_HUMAN (Histone H2B type 1-L OS=Homo sapiens GN=HIST1H2BL PE=1 SV=3) HSP 1 Score: 87.8113 bits (216), Expect = 5.435e-17 Identity = 46/78 (58.97%), Postives = 55/78 (70.51%), Query Frame = 2 Query: 212 ETYKNYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLGKVQ*EADDYIFGKFRPL*DLYFPGELAKHAV 445 E+Y Y++KVLKQVHPD GISSKAMGIMNSF+NDIFE++A EASRL + + + L PGELAKHAV Sbjct: 36 ESYSVYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIASEASRLAHYN-KRSTITSREIQTAVRLLLPGELAKHAV 112 The following BLAST results are available for this feature:
BLAST of CX300659 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 195
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300659 ID=CX300659; Name=CX300659; organism=Citrus clementina; type=EST; length=665bpback to top |