CX300666
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX300666 vs. ExPASy Swiss-Prot
Match: UBIQ_LEIMA (Ubiquitin OS=Leishmania major GN=UB-EP52 PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 4.633e-32 Identity = 68/73 (93.15%), Postives = 71/73 (97.26%), Query Frame = 1 Query: 133 FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 351 FVKTLTGKTI LEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLE+GRTL+DYNIQKESTLHLVLRLRGG Sbjct: 4 FVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGG 76 HSP 2 Score: 80.8777 bits (198), Expect = 3.878e-15 Identity = 38/40 (95.00%), Postives = 40/40 (100.00%), Query Frame = 3 Query: 3 PPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 122 PPDQQRLIFAGKQLE+GRTL+DYNIQKESTLHLVLRLRGG Sbjct: 37 PPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGG 76
BLAST of CX300666 vs. ExPASy Swiss-Prot
Match: UBIQ_LEITA (Ubiquitin OS=Leishmania tarentolae GN=UB-EP52 PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 1.490e-30 Identity = 66/73 (90.41%), Postives = 69/73 (94.52%), Query Frame = 1 Query: 133 FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 351 FVKTLTG TI LEVE SDTI+NVKAKIQDKEGIPPDQQRLIFA KQLE+GRTL+DYNIQKESTLHLVLRLRGG Sbjct: 4 FVKTLTGTTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFADKQLEEGRTLSDYNIQKESTLHLVLRLRGG 76 HSP 2 Score: 78.1814 bits (191), Expect = 2.514e-14 Identity = 37/40 (92.50%), Postives = 39/40 (97.50%), Query Frame = 3 Query: 3 PPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 122 PPDQQRLIFA KQLE+GRTL+DYNIQKESTLHLVLRLRGG Sbjct: 37 PPDQQRLIFADKQLEEGRTLSDYNIQKESTLHLVLRLRGG 76
BLAST of CX300666 vs. ExPASy Swiss-Prot
Match: UBIQ_LUMTE (Ubiquitin (Fragment) OS=Lumbricus terrestris PE=1 SV=2) HSP 1 Score: 120.553 bits (301), Expect = 4.488e-27 Identity = 60/63 (95.24%), Postives = 62/63 (98.41%), Query Frame = 1 Query: 157 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 345 TITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLR Sbjct: 1 TITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 63 HSP 2 Score: 77.7962 bits (190), Expect = 3.283e-14 Identity = 37/38 (97.37%), Postives = 38/38 (100.00%), Query Frame = 3 Query: 3 PPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 116 PPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLR Sbjct: 26 PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 63
BLAST of CX300666 vs. ExPASy Swiss-Prot
Match: UBIL_NPVOP (Ubiquitin-like protein OS=Orgyia pseudotsugata multicapsid polyhedrosis virus GN=V-UBI PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 7.655e-27 Identity = 58/73 (79.45%), Postives = 64/73 (87.67%), Query Frame = 1 Query: 133 FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 351 FVKTLTGKTIT+E E DT+ VK KI DKEG+P DQQRLI+AGKQLED +TLADYNIQKESTLH+VLRLRGG Sbjct: 4 FVKTLTGKTITVETEPGDTVGQVKQKIADKEGVPVDQQRLIYAGKQLEDAQTLADYNIQKESTLHMVLRLRGG 76 HSP 2 Score: 74.3294 bits (181), Expect = 3.630e-13 Identity = 35/40 (87.50%), Postives = 38/40 (95.00%), Query Frame = 3 Query: 3 PPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 122 P DQQRLI+AGKQLED +TLADYNIQKESTLH+VLRLRGG Sbjct: 37 PVDQQRLIYAGKQLEDAQTLADYNIQKESTLHMVLRLRGG 76
BLAST of CX300666 vs. ExPASy Swiss-Prot
Match: UBIL_NPVAC (Ubiquitin-like protein OS=Autographa californica nuclear polyhedrosis virus GN=V-UBI PE=3 SV=2) HSP 1 Score: 117.087 bits (292), Expect = 4.962e-26 Identity = 55/73 (75.34%), Postives = 65/73 (89.04%), Query Frame = 1 Query: 133 FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 351 F+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG Sbjct: 4 FIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 76 HSP 2 Score: 75.0998 bits (183), Expect = 2.128e-13 Identity = 35/40 (87.50%), Postives = 38/40 (95.00%), Query Frame = 3 Query: 3 PPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 122 P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG Sbjct: 37 PVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 76
BLAST of CX300666 vs. ExPASy Swiss-Prot
Match: RUB2_ORYSJ (NEDD8-like protein RUB2 OS=Oryza sativa subsp. japonica GN=RUB2 PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.071e-20 Identity = 46/73 (63.01%), Postives = 59/73 (80.82%), Query Frame = 1 Query: 136 VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGE 354 VKTLTGK I +++E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T DYNI+ S LHLVL LRGG+ Sbjct: 5 VKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGGQ 77
BLAST of CX300666 vs. ExPASy Swiss-Prot
Match: RUB1_DESAN (NEDD8-like protein RUB1 OS=Deschampsia antarctica GN=RUB1 PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 1.398e-20 Identity = 47/72 (65.28%), Postives = 58/72 (80.56%), Query Frame = 1 Query: 136 VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 351 VKTLTGK I +++E +DTID VK ++++KEGIPP QQRLI+AGKQL D +T DYNI+ S LHLVL LRGG Sbjct: 5 VKTLTGKEIEIDIEPTDTIDRVKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76
BLAST of CX300666 vs. ExPASy Swiss-Prot
Match: RUB1_ORYSJ (NEDD8-like protein RUB1 OS=Oryza sativa subsp. japonica GN=RUB1 PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 1.826e-20 Identity = 46/72 (63.89%), Postives = 58/72 (80.56%), Query Frame = 1 Query: 136 VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 351 VKTLTGK I +++E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T DYNI+ S LHLVL LRGG Sbjct: 5 VKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76
BLAST of CX300666 vs. ExPASy Swiss-Prot
Match: RUB1_ARATH (NEDD8-like protein RUB1 OS=Arabidopsis thaliana GN=RUB1 PE=1 SV=2) HSP 1 Score: 98.5969 bits (244), Expect = 1.826e-20 Identity = 46/72 (63.89%), Postives = 58/72 (80.56%), Query Frame = 1 Query: 136 VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 351 VKTLTGK I +++E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T DYNI+ S LHLVL LRGG Sbjct: 5 VKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76
BLAST of CX300666 vs. ExPASy Swiss-Prot
Match: NEDD8_DROME (NEDD8 OS=Drosophila melanogaster GN=Nedd8 PE=1 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 3.115e-20 Identity = 43/73 (58.90%), Postives = 58/73 (79.45%), Query Frame = 1 Query: 136 VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGE 354 VKTLTGK I +++E +D +D +K ++++KEGIPP QQRLIF+GKQ+ D +T ADY +Q S LHLVL LRGG+ Sbjct: 5 VKTLTGKEIEIDIEPTDKVDRIKERVEEKEGIPPQQQRLIFSGKQMNDDKTAADYKVQGGSVLHLVLALRGGD 77 The following BLAST results are available for this feature:
BLAST of CX300666 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 92
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300666 ID=CX300666; Name=CX300666; organism=Citrus clementina; type=EST; length=517bpback to top |