CX302536

Overview
NameCX302536
Unique NameCX302536
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length561
Libraries
Library NameType
NTLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX302536 vs. ExPASy Swiss-Prot
Match: BETB_PSEPK (Betaine aldehyde dehydrogenase OS=Pseudomonas putida (strain KT2440) GN=betB PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 3.263e-32
Identity = 75/177 (42.37%), Postives = 101/177 (57.06%), Query Frame = 3
Query:   30 DQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGP*IDPEQFEKVLRYIRSGIESNATLECGGDRLGN----RGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCY 548
            D+A ++A  A FY+ GQ C  G+R ++   +   F  K   R  R  VG+P       GP +  +  E VL YI  G E  A + CGG+RL      +G FV PTVF+D  DDM I ++EIFGPV SIL ++  ++VIRRAN T +GLAAGV T     A+ ++  L AG  WIN +
Sbjct:  268 DKAADIAMMANFYSSGQVCTNGTRVFIPAEMKAAFEAKIAERVARIRVGNPEDENTNFGPLVSFQHMESVLGYIAKGKEEGARVLCGGERLTAGDFAKGAFVAPTVFTDCTDDMTIVKEEIFGPVMSILTYETEEEVIRRANDTDYGLAAGVCTNDITRAHRIIHKLEAGICWINAW 444          
BLAST of CX302536 vs. ExPASy Swiss-Prot
Match: BETB_PSEP1 (Betaine aldehyde dehydrogenase OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=betB PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 3.263e-32
Identity = 75/177 (42.37%), Postives = 101/177 (57.06%), Query Frame = 3
Query:   30 DQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGP*IDPEQFEKVLRYIRSGIESNATLECGGDRLGN----RGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCY 548
            D+A ++A  A FY+ GQ C  G+R ++   +   F  K   R  R  VG+P       GP +  +  E VL YI  G E  A + CGG+RL      +G FV PTVF+D  DDM I ++EIFGPV SIL ++  ++VIRRAN T +GLAAGV T     A+ ++  L AG  WIN +
Sbjct:  268 DKAADIAMMANFYSSGQVCTNGTRVFIPAEMKAAFEAKIAERVARIRVGNPEDENTNFGPLVSFQHMESVLGYIAKGKEEGARVLCGGERLTAGDFAKGAFVAPTVFTDCTDDMTIVKEEIFGPVMSILTYETEEEVIRRANDTDYGLAAGVCTNDITRAHRIIHKLEAGICWINAW 444          
BLAST of CX302536 vs. ExPASy Swiss-Prot
Match: BETB_ERWCT (Betaine aldehyde dehydrogenase OS=Erwinia carotovora subsp. atroseptica GN=betB PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 4.262e-32
Identity = 73/177 (41.24%), Postives = 106/177 (59.89%), Query Frame = 3
Query:   30 DQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGP*IDPEQFEKVLRYIRSGIESNATLECGGDRLGN----RGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCY 548
            D+A ++A  A F++ GQ C  G+R +V + +  +F EK  A   R   GDP    V  GP +     E VLRYI SG    A +  GG+ + +    +G +V PTVF+D +DDM I + EIFGPV SIL +++ D+VIRRAN + +GLAAG+ T+  + A+ ++  L AG  WIN +
Sbjct:  268 DKAADIAMMANFFSSGQVCTNGTRVFVPKALQAQFEEKILACVQRIRAGDPTDESVNFGPLVSFPHRESVLRYIESGKREGARVLVGGEPMTDGDYAQGAYVAPTVFTDCRDDMKIVRKEIFGPVMSILTYQDEDEVIRRANDSEYGLAAGIVTRDLNRAHRVIHQLEAGICWINTW 444          
BLAST of CX302536 vs. ExPASy Swiss-Prot
Match: BETB_YERPY (Betaine aldehyde dehydrogenase OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=betB PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 5.566e-32
Identity = 74/177 (41.81%), Postives = 105/177 (59.32%), Query Frame = 3
Query:   30 DQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGP*IDPEQFEKVLRYIRSGIESNATLECGGDRLGN----RGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCY 548
            D+A ++A  A FY+ GQ C  G+R +V + +   F +K   R  R  +GDP    V  GP +  +  + V+RYI SG    ATL  GG  L       G +V PTVF+  +DDM I ++EIFGPV SIL ++  ++VIRRAN T +GLAAGV T+  + A+ ++  L+AG  WIN +
Sbjct:  268 DKAADIAMMANFYSSGQVCTNGTRVFVPQALQAAFEQKIVERVKRIHIGDPSDERVNFGPLVSFQHRDSVMRYIDSGKREGATLLIGGCSLTEGALAHGAYVAPTVFTHCRDDMQIVREEIFGPVMSILSYQSEEEVIRRANDTEYGLAAGVVTQDLNRAHRVIHQLQAGICWINTW 444          
BLAST of CX302536 vs. ExPASy Swiss-Prot
Match: BETB_PSEPW (Betaine aldehyde dehydrogenase OS=Pseudomonas putida (strain W619) GN=betB PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 5.566e-32
Identity = 73/177 (41.24%), Postives = 101/177 (57.06%), Query Frame = 3
Query:   30 DQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGP*IDPEQFEKVLRYIRSGIESNATLECGGDRLGN----RGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCY 548
            D+A ++A  A FY+ GQ C  G+R ++  ++   F  K   R  R   G+P       GP +  +  E VL YI  G +  A + CGG+RL      +G FV PTVF+D  DDM I ++EIFGPV SIL ++  ++VIRRAN T +GLAAGV T     A+ ++  L AG  WIN +
Sbjct:  268 DKAADIAMMANFYSSGQVCTNGTRVFIPAQMKAAFEAKIAERVARIRAGNPEDENTNFGPLVSFQHMESVLGYIAKGKQEGARVLCGGERLTEGDFAKGAFVAPTVFTDCTDDMTIVKEEIFGPVMSILTYETEEEVIRRANDTEYGLAAGVCTNDITRAHRIIHKLEAGICWINAW 444          
BLAST of CX302536 vs. ExPASy Swiss-Prot
Match: BETB_ACIAD (Betaine aldehyde dehydrogenase OS=Acinetobacter sp. (strain ADP1) GN=betB PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 5.566e-32
Identity = 74/177 (41.81%), Postives = 104/177 (58.76%), Query Frame = 3
Query:   30 DQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGP*IDPEQFEKVLRYIRSGIESNATLECGGDR----LGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCY 548
            D+A ++A  A F++ GQ C  G+R ++ +R+   F +    R  R  +GDP  +    GP +     EKVL YI SG +  A +  GG+R    L  +G +VQPTVF+D  DDM I Q+EIFGPV SIL +   ++ I RAN T FGLAAGV T++   A+ ++  L AG  WIN +
Sbjct:  268 DRAADIAVMANFFSSGQVCTNGTRVFIPQRLKAAFEQAVVERVKRIRMGDPQHTDTNFGPLVSFPHMEKVLSYIESGKQQGAKVLIGGERATTGLLAQGAYVQPTVFTDCHDDMKIVQEEIFGPVMSILTYDTIEEAIERANNTNFGLAAGVVTQNISQAHQIIHQLEAGICWINTW 444          
BLAST of CX302536 vs. ExPASy Swiss-Prot
Match: BADH_ATRHO (Betaine aldehyde dehydrogenase, chloroplastic OS=Atriplex hortensis PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 5.566e-32
Identity = 65/174 (37.36%), Postives = 100/174 (57.47%), Query Frame = 3
Query:   30 DQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGP*IDPEQFEKVLRYIRSGIESNATLECGGDRLGN--RGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINC 545
            + AVE   F +F+  GQ C A SR  VHE +  EFV++         + DPF+ G   GP I   Q++K++++I +     AT+ CGG R  +  +GY+++PT+ +D+   M I ++E+FGPV  +  FK  D+ I  AN T +GLA  VF+K  +    + +AL  G VW+NC
Sbjct:  278 ETAVEWTLFGVFWTNGQICSATSRLLVHESIAAEFVDRMVKWTKNIKISDPFEEGCRLGPVISKGQYDKIMKFISTAKSEGATILCGGSRPEHLKKGYYIEPTIITDITTSMQIWKEEVFGPVICVKTFKTEDEAIELANDTEYGLAGAVFSKDLERCERVTKALEVGAVWVNC 451          
BLAST of CX302536 vs. ExPASy Swiss-Prot
Match: AL9A1_PONAB (4-trimethylaminobutyraldehyde dehydrogenase OS=Pongo abelii GN=ALDH9A1 PE=2 SV=2)

HSP 1 Score: 137.117 bits (344), Expect = 5.566e-32
Identity = 73/182 (40.11%), Postives = 108/182 (59.34%), Query Frame = 3
Query:   30 DQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGP*IDPEQFEKVLRYIRSGIESNATLECGGD-------RLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDV 554
            + AV+ A  A F  QGQ CC G+R +V + + D+F E+   +  R  +GDP       GP I+    E+VL +++   E  A + CGGD       +L + GY+++P V ++ +DDM   ++EIFGPV SIL F    +V+ RAN T FGLAAGVFT+    A+ ++  L+AGT +IN Y+V
Sbjct:  270 NNAVKGALMANFLTQGQVCCNGTRVFVQKEILDKFTEEVVKQTQRIKIGDPLLEDTRMGPLINRPHLERVLGFVKVAKEQGAKVLCGGDIYVPEDPKLKD-GYYMRPCVLTNCRDDMTCVKEEIFGPVMSILSFDTEAEVLERANDTTFGLAAGVFTRDIQRAHRVVAELQAGTCFINNYNV 450          
BLAST of CX302536 vs. ExPASy Swiss-Prot
Match: AL9A1_HUMAN (4-trimethylaminobutyraldehyde dehydrogenase OS=Homo sapiens GN=ALDH9A1 PE=1 SV=3)

HSP 1 Score: 137.117 bits (344), Expect = 5.566e-32
Identity = 73/182 (40.11%), Postives = 108/182 (59.34%), Query Frame = 3
Query:   30 DQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGP*IDPEQFEKVLRYIRSGIESNATLECGGD-------RLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDV 554
            + AV+ A  A F  QGQ CC G+R +V + + D+F E+   +  R  +GDP       GP I+    E+VL +++   E  A + CGGD       +L + GY+++P V ++ +DDM   ++EIFGPV SIL F    +V+ RAN T FGLAAGVFT+    A+ ++  L+AGT +IN Y+V
Sbjct:  270 NNAVKGALMANFLTQGQVCCNGTRVFVQKEILDKFTEEVVKQTQRIKIGDPLLEDTRMGPLINRPHLERVLGFVKVAKEQGAKVLCGGDIYVPEDPKLKD-GYYMRPCVLTNCRDDMTCVKEEIFGPVMSILSFDTEAEVLERANDTTFGLAAGVFTRDIQRAHRVVAELQAGTCFINNYNV 450          
BLAST of CX302536 vs. ExPASy Swiss-Prot
Match: BETB_ECOHS (Betaine aldehyde dehydrogenase OS=Escherichia coli O9:H4 (strain HS) GN=betB PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 7.270e-32
Identity = 75/177 (42.37%), Postives = 102/177 (57.63%), Query Frame = 3
Query:   30 DQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGP*IDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGY----FVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCY 548
            D A ++A  A F++ GQ C  G+R +V  +    F +K  AR  R   GD F      GP +     + VLRYI  G E  A + CGGD L   G+    +V PTVF+D +DDM I ++EIFGPV SIL ++  D+VIRRAN T +GLAAG+ T   + A+ ++  L AG  WIN +
Sbjct:  268 DLAADIAMMANFFSSGQVCTNGTRVFVPAKCKAAFEQKILARVERIRAGDVFDPQTNFGPLVSFPHRDNVLRYIAKGQEEGARVLCGGDVLKGDGFDNGAWVAPTVFTDCRDDMTIVREEIFGPVMSILTYETEDEVIRRANDTDYGLAAGIVTADLNRAHRVIHQLEAGICWINTW 444          
The following BLAST results are available for this feature:
BLAST of CX302536 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 447
Match NameE-valueIdentityDescription
BETB_PSEPK3.263e-3242.37Betaine aldehyde dehydrogenase OS=Pseudomonas puti... [more]
BETB_PSEP13.263e-3242.37Betaine aldehyde dehydrogenase OS=Pseudomonas puti... [more]
BETB_ERWCT4.262e-3241.24Betaine aldehyde dehydrogenase OS=Erwinia carotovo... [more]
BETB_YERPY5.566e-3241.81Betaine aldehyde dehydrogenase OS=Yersinia pseudot... [more]
BETB_PSEPW5.566e-3241.24Betaine aldehyde dehydrogenase OS=Pseudomonas puti... [more]
BETB_ACIAD5.566e-3241.81Betaine aldehyde dehydrogenase OS=Acinetobacter sp... [more]
BADH_ATRHO5.566e-3237.36Betaine aldehyde dehydrogenase, chloroplastic OS=A... [more]
AL9A1_PONAB5.566e-3240.114-trimethylaminobutyraldehyde dehydrogenase OS=Pon... [more]
AL9A1_HUMAN5.566e-3240.114-trimethylaminobutyraldehyde dehydrogenase OS=Hom... [more]
BETB_ECOHS7.270e-3242.37Betaine aldehyde dehydrogenase OS=Escherichia coli... [more]

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Properties
Property NameValue
Genbank descriptionC07003G06SK NTLeaf1 Citrus clementina cDNA clone C07003G06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX302536 ID=CX302536; Name=CX302536; organism=Citrus clementina; type=EST; length=561bp
ANNNNNNNNNNNNNNNNNNNNNNNNNNNNGACCAGGCTGTGGAACTTGCA
CACTTTGCTTTGTTCTATAATCAGGGACAATGTTGCTGTGCTGGATCTCG
TACTTATGTACATGAGCGTGTATATGACGAGTTTGTAGAAAAAGCAAAGG
CACGTGCAATGAGGCGTATTGTTGGCGATCCCTTCAAGAGTGGTGTTGAA
CAAGGTCCTTAGATTGATCCAGAGCAATTTGAGAAGGTCCTTAGGTACAT
AAGGTCTGGAATTGAAAGCAATGCAACCCTTGAGTGTGGAGGTGATAGAT
TGGGCAACAGAGGCTACTTTGTTCAGCCAACTGTCTTCTCAGATGTTAAG
GATGACATGTTGATAGCACAGGATGAAATCTTTGGCCCGGTGCAATCCAT
CTTGAAGTTCAAGGAAACTGATGACGTTATAAGAAGAGCAAATAAAACAC
GCTTTGGTCTAGCTGCTGGGGTTTTCACCAAGAGTGCAGACACTGCTAAC
ACCATGATGCGTGCACTGAGAGCTGGGACTGTATGGATTAACTGCTACGA
CGTGTTTGATG
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