CX302536

Overview
NameCX302536
Unique NameCX302536
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length561
Libraries
Library NameType
NTLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX302536 vs. ExPASy Swiss-Prot
Match: ALDA_STAHJ (Putative aldehyde dehydrogenase aldA OS=Staphylococcus haemolyticus (strain JCSC1435) GN=aldA PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 4.712e-31
Identity = 71/181 (39.23%), Postives = 104/181 (57.46%), Query Frame = 3
Query:   30 DQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGP*IDPEQFEKVLRYIRSGIE-SNATLECGGDRLGN----RGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVF 557
            DQ VE A   + +NQG+ C AGSR  V   +YD+ + K K       VGDPF   V+      PEQ EK+  Y++   E SNA +  GG RL +    +GYF +PT+     +   +AQ+EIFGPV  + KF++  + I+ AN + +GLA G+FT + + A  + +A+R G +WIN Y+ F
Sbjct:  273 DQVVEGAQLGILFNQGEVCSAGSRLLVQSSIYDKVMPKLKEAFENIKVGDPFDEDVKMSAQTGPEQLEKIESYVKIAEEDSNANILTGGHRLTDNGRDKGYFFEPTIIEIKDNSHQLAQEEIFGPVVVVEKFEDEAEAIKIANDSEYGLAGGIFTTNINRALNVAKAMRTGRIWINTYNQF 453          
BLAST of CX302536 vs. ExPASy Swiss-Prot
Match: BETB_YERPS (Betaine aldehyde dehydrogenase OS=Yersinia pseudotuberculosis GN=betB PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 6.154e-31
Identity = 73/177 (41.24%), Postives = 103/177 (58.19%), Query Frame = 3
Query:   30 DQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGP*IDPEQFEKVLRYIRSGIESNATLECGGDRLGN----RGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCY 548
            D+A ++A  A FY+ GQ C  G+R +V   +   F +K   R  R  +GDP       GP +  +  + V+RYI SG    ATL  GG  L       G +V PTVF+  +DDM I ++EIFGPV SIL ++  ++VIRRAN T +GLAAGV T+  + A+ ++  L+AG  WIN +
Sbjct:  268 DKAADIAMMANFYSSGQVCTNGTRVFVPLALQAAFEQKIVERVKRIHIGDPSDERTNFGPLVSFQHRDSVMRYIDSGKREGATLLIGGYSLTEGALAHGAYVAPTVFTHCRDDMQIVREEIFGPVMSILSYQSEEEVIRRANDTEYGLAAGVVTQDLNRAHRVIHQLQAGICWINTW 444          
BLAST of CX302536 vs. ExPASy Swiss-Prot
Match: BETB_XANC5 (Betaine aldehyde dehydrogenase OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=betB PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 6.154e-31
Identity = 69/177 (38.98%), Postives = 99/177 (55.93%), Query Frame = 3
Query:   30 DQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGP*IDPEQFEKVLRYIRSGIESNATLECGGDRLGN----RGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCY 548
            D A ++A  A FY+ GQ C  G+R +V   +   F  +  AR  R  +GDP       GP +     ++VL +I  G    A L CGG+RL +    +GY+V PT+FSD  D M I ++EIFGPV S+L + + D+ + RAN T +GLAAGV T     A+ ++  L AG  W+N +
Sbjct:  268 DLAADIAMMANFYSSGQVCTNGTRVFVPRALRHAFEARLLARVQRIHIGDPLDERTTFGPLVSAAHMQRVLEHIEQGKAEGARLLCGGERLQDGALAQGYYVAPTIFSDCTDVMTIVREEIFGPVLSLLTYDDEDEAVTRANATTYGLAAGVVTPDLARAHRLIHRLEAGICWVNTW 444          
BLAST of CX302536 vs. ExPASy Swiss-Prot
Match: BETB_BACSU (Betaine aldehyde dehydrogenase OS=Bacillus subtilis GN=gbsA PE=1 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 6.154e-31
Identity = 71/173 (41.04%), Postives = 102/173 (58.96%), Query Frame = 3
Query:   36 AVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGP*IDPEQFEKVLRYIRSGIESNATLECGGDRLGN----RGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWIN 542
            AV+ A  A+F++ GQ C AGSR  V + ++D+F+ +   RA R  +G+ F +  E GP I  E   KV +Y+  GIE  A LE GG R  +     G+F +PT+FS+   DM I Q+E+FGPV ++  F   ++VI  AN T +GLA  V++K  +    +   LR GTVWIN
Sbjct:  267 AVDQALNAVFFHAGQVCSAGSRLLVEDAIHDQFLAELVKRAKRIKLGNGFHAETESGPLISAEHRAKVEKYVEIGIEEGAKLETGGKRPEDPELQNGFFYEPTIFSNCNSDMRIVQEEVFGPVLTVETFSSEEEVIELANDTIYGLAGAVWSKDIEKCERVAARLRMGTVWIN 439          
BLAST of CX302536 vs. ExPASy Swiss-Prot
Match: AL9A1_BOVIN (4-trimethylaminobutyraldehyde dehydrogenase OS=Bos taurus GN=ALDH9A1 PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 6.154e-31
Identity = 70/179 (39.11%), Postives = 103/179 (57.54%), Query Frame = 3
Query:   36 AVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGP*IDPEQFEKVLRYIRSGIESNATLECGGDRLGNR------GYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDV 554
            AV+ A  A F  QG+ CC G+R +V + + D+F E+   +  R  +GDP       GP I+    E+VL +++   E  A + CGGD           GY+++P V ++ +DDM   ++EIFGPV SIL F    +V+ RAN T FGLAAGVFT+    A+ ++  L+AG  +IN Y+V
Sbjct:  272 AVKGALMANFLTQGEVCCNGTRVFVQKEILDQFTEEVVKQTQRIKIGDPLLEDTRMGPLINRPHLERVLGFVKVAKEQGAKVLCGGDVFVPEDPKLKDGYYMRPCVLTNCRDDMTCVKEEIFGPVMSILSFDTEAEVLERANDTTFGLAAGVFTRDIQRAHRVVAELQAGMCFINNYNV 450          
BLAST of CX302536 vs. ExPASy Swiss-Prot
Match: BETB_XANAC (Betaine aldehyde dehydrogenase OS=Xanthomonas axonopodis pv. citri GN=betB PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 1.791e-30
Identity = 69/177 (38.98%), Postives = 98/177 (55.37%), Query Frame = 3
Query:   30 DQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGP*IDPEQFEKVLRYIRSGIESNATLECGGDRLGN----RGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCY 548
            D A ++A  A FY+ GQ C  G+R +V   +   F  +  AR  R  +GDP       GP       ++VL +I  G    A L CGG+RL +    +GY+V PT+FSD  D M I ++EIFGPV S+L + + D+ + RAN T +GLAAGV T     A+ ++  L AG  W+N +
Sbjct:  268 DVAADIAMMANFYSSGQVCTNGTRVFVPRALRHAFEARLLARVQRIHIGDPLDERTTFGPLASAAHMQRVLEHIEQGKAEGARLLCGGERLQDGALVQGYYVAPTIFSDCTDVMTIVREEIFGPVLSLLTYDDEDEAVTRANATTYGLAAGVVTPDLARAHRLIHRLEAGICWVNTW 444          
BLAST of CX302536 vs. ExPASy Swiss-Prot
Match: BADH_SPIOL (Betaine aldehyde dehydrogenase, chloroplastic OS=Spinacia oleracea PE=1 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 1.791e-30
Identity = 64/174 (36.78%), Postives = 97/174 (55.75%), Query Frame = 3
Query:   30 DQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGP*IDPEQFEKVLRYIRSGIESNATLECGGDRLGN--RGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINC 545
            D+ VE   F  F+  GQ C A SR  VHE +  EFV+K         + DPF+ G   GP I   Q++K++++I +     AT+  GG R  +  +GY+++PT+ +D+   M I ++E+FGPV  +  F   D+ I  AN T +GLAA VF+   +    + +AL  G VW+NC
Sbjct:  273 DKVVEWTIFGCFWTNGQICSATSRLLVHESIAAEFVDKLVKWTKNIKISDPFEEGCRLGPVISKGQYDKIMKFISTAKSEGATILYGGSRPEHLKKGYYIEPTIVTDISTSMQIWKEEVFGPVLCVKTFSSEDEAIALANDTEYGLAAAVFSNDLERCERITKALEVGAVWVNC 446          
BLAST of CX302536 vs. ExPASy Swiss-Prot
Match: BETB_XANCB (Betaine aldehyde dehydrogenase OS=Xanthomonas campestris pv. campestris (strain B100) GN=betB PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 2.339e-30
Identity = 70/177 (39.55%), Postives = 98/177 (55.37%), Query Frame = 3
Query:   30 DQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGP*IDPEQFEKVLRYIRSGIESNATLECGGDRLGN----RGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCY 548
            D A ++A  A FY+ GQ C  G+R +V   +   F  +  AR  R  +GDP       GP +     ++VL +I  G    A L CGG+RL +    +G +V PT+FSD  D M I ++EIFGPV S+L + + D+ I RAN T +GLAAGV T     A+ ++  L AG  WIN +
Sbjct:  268 DLAADIAMMANFYSSGQVCTNGTRVFVPRALRTAFEARLLARVQRIHIGDPLDERTTFGPMVSAAHMQRVLEHIEQGKAEGARLLCGGERLRDGALAQGCYVAPTIFSDCTDVMTIVREEIFGPVLSLLTYDDEDEAITRANATSYGLAAGVVTPDLSRAHRLIHRLEAGICWINTW 444          
BLAST of CX302536 vs. ExPASy Swiss-Prot
Match: BETB_XANC8 (Betaine aldehyde dehydrogenase OS=Xanthomonas campestris pv. campestris (strain 8004) GN=betB PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 2.339e-30
Identity = 70/177 (39.55%), Postives = 98/177 (55.37%), Query Frame = 3
Query:   30 DQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGP*IDPEQFEKVLRYIRSGIESNATLECGGDRLGN----RGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCY 548
            D A ++A  A FY+ GQ C  G+R +V   +   F  +  AR  R  +GDP       GP +     ++VL +I  G    A L CGG+RL +    +G +V PT+FSD  D M I ++EIFGPV S+L + + D+ I RAN T +GLAAGV T     A+ ++  L AG  WIN +
Sbjct:  268 DLAADIAMMANFYSSGQVCTNGTRVFVPRALRTAFEARLLARVQRIHIGDPLDERTTFGPMVSAAHMQRVLEHIEQGKAEGARLLCGGERLRDGALAQGCYVAPTIFSDCTDVMTIVREEIFGPVLSLLTYDDEDEAITRANATSYGLAAGVVTPDLSRAHRLIHRLEAGICWINTW 444          
BLAST of CX302536 vs. ExPASy Swiss-Prot
Match: BETB_ECO8A (Betaine aldehyde dehydrogenase OS=Escherichia coli O8 (strain IAI1) GN=betB PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 2.339e-30
Identity = 73/177 (41.24%), Postives = 101/177 (57.06%), Query Frame = 3
Query:   30 DQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGP*IDPEQFEKVLRYIRSGIESNATLECGGDRLG----NRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCY 548
            D A ++A  A F++ GQ C  G+R +V  +    F +K  AR  R   GD F      GP +     + VLRYI  G E  A + CGGD L     + G +V PTVF+D  D+M I ++EIFGPV SIL ++  ++VIRRAN T +GLAAG+ T   + A+ ++  L AG  WIN +
Sbjct:  268 DLAADIAMMANFFSSGQVCTNGTRVFVPAKCKAAFEQKILARVERIRAGDVFDPQTNFGPLVSFPHRDNVLRYIVKGKEEGARVLCGGDVLKGDGLDNGAWVAPTVFTDCSDEMTIVREEIFGPVMSILTYESEEEVIRRANDTDYGLAAGIVTADLNRAHRVIHQLEAGICWINTW 444          
The following BLAST results are available for this feature:
BLAST of CX302536 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 447
Match NameE-valueIdentityDescription
ALDA_STAHJ4.712e-3139.23Putative aldehyde dehydrogenase aldA OS=Staphyloco... [more]
BETB_YERPS6.154e-3141.24Betaine aldehyde dehydrogenase OS=Yersinia pseudot... [more]
BETB_XANC56.154e-3138.98Betaine aldehyde dehydrogenase OS=Xanthomonas camp... [more]
BETB_BACSU6.154e-3141.04Betaine aldehyde dehydrogenase OS=Bacillus subtili... [more]
AL9A1_BOVIN6.154e-3139.114-trimethylaminobutyraldehyde dehydrogenase OS=Bos... [more]
BETB_XANAC1.791e-3038.98Betaine aldehyde dehydrogenase OS=Xanthomonas axon... [more]
BADH_SPIOL1.791e-3036.78Betaine aldehyde dehydrogenase, chloroplastic OS=S... [more]
BETB_XANCB2.339e-3039.55Betaine aldehyde dehydrogenase OS=Xanthomonas camp... [more]
BETB_XANC82.339e-3039.55Betaine aldehyde dehydrogenase OS=Xanthomonas camp... [more]
BETB_ECO8A2.339e-3041.24Betaine aldehyde dehydrogenase OS=Escherichia coli... [more]

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Properties
Property NameValue
Genbank descriptionC07003G06SK NTLeaf1 Citrus clementina cDNA clone C07003G06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX302536 ID=CX302536; Name=CX302536; organism=Citrus clementina; type=EST; length=561bp
ANNNNNNNNNNNNNNNNNNNNNNNNNNNNGACCAGGCTGTGGAACTTGCA
CACTTTGCTTTGTTCTATAATCAGGGACAATGTTGCTGTGCTGGATCTCG
TACTTATGTACATGAGCGTGTATATGACGAGTTTGTAGAAAAAGCAAAGG
CACGTGCAATGAGGCGTATTGTTGGCGATCCCTTCAAGAGTGGTGTTGAA
CAAGGTCCTTAGATTGATCCAGAGCAATTTGAGAAGGTCCTTAGGTACAT
AAGGTCTGGAATTGAAAGCAATGCAACCCTTGAGTGTGGAGGTGATAGAT
TGGGCAACAGAGGCTACTTTGTTCAGCCAACTGTCTTCTCAGATGTTAAG
GATGACATGTTGATAGCACAGGATGAAATCTTTGGCCCGGTGCAATCCAT
CTTGAAGTTCAAGGAAACTGATGACGTTATAAGAAGAGCAAATAAAACAC
GCTTTGGTCTAGCTGCTGGGGTTTTCACCAAGAGTGCAGACACTGCTAAC
ACCATGATGCGTGCACTGAGAGCTGGGACTGTATGGATTAACTGCTACGA
CGTGTTTGATG
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