CX302536

Overview
NameCX302536
Unique NameCX302536
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length561
Libraries
Library NameType
NTLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9488 contig Ccv1_Contig9488:344..904. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CX302536 vs. ExPASy Swiss-Prot
Match: ALDH5_YEAS7 (Aldehyde dehydrogenase 5, mitochondrial OS=Saccharomyces cerevisiae (strain YJM789) GN=ALD5 PE=3 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 3.256e-40
Identity = 79/176 (44.89%), Postives = 113/176 (64.20%), Query Frame = 3 
Query:   30 DQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGP*IDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVF 557
            D+AV+   F +FYN G+ CCAGSR Y+ + VY+E ++K K       VGDPF   V QG     +Q  K+L Y+       A L  GG R G++GYFV+PTVF+DVK+DM I ++E+FGP+ ++ KF   D+VI  AN +++GLAAG+ T   + A  + + ++AGTVWIN Y+ F
Sbjct:  304 DKAVKNIAFGIFYNSGEVCCAGSRIYIQDTVYEEVLQKLKDYTESLKVGDPFDEEVFQGAQTSDKQLHKILDYVDVAKSEGARLVTGGARHGSKGYFVKPTVFADVKEDMRIVKEEVFGPIVTVSKFSTVDEVIAMANDSQYGLAAGIHTNDINKAVDVSKRVKAGTVWINTYNNF 479
[Close]
BLAST of CX302536 vs. ExPASy Swiss-Prot
Match: ALDH5_YEAST (Aldehyde dehydrogenase 5, mitochondrial OS=Saccharomyces cerevisiae GN=ALD5 PE=1 SV=3)

HSP 1 Score: 163.31 bits (412), Expect = 7.253e-40
Identity = 79/176 (44.89%), Postives = 112/176 (63.64%), Query Frame = 3 
Query:   30 DQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGP*IDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVF 557
            D+AV+   F +FYN G+ CCAGSR Y+ + VY+E ++K K       VGDPF   V QG     +Q  K+L Y+       A L  GG R G++GYFV+PTVF+DVK DM I ++E+FGP+ ++ KF   D+VI  AN +++GLAAG+ T   + A  + + ++AGTVWIN Y+ F
Sbjct:  304 DKAVKNIAFGIFYNSGEVCCAGSRIYIQDTVYEEVLQKLKDYTESLKVGDPFDEEVFQGAQTSDKQLHKILDYVDVAKSEGARLVTGGARHGSKGYFVKPTVFADVKGDMRIVKEEVFGPIVTVSKFSTVDEVIAMANDSQYGLAAGIHTNDINKAVDVSKRVKAGTVWINTYNNF 479
[Close]
BLAST of CX302536 vs. ExPASy Swiss-Prot
Match: BETB_OCHA4 (Betaine aldehyde dehydrogenase OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=betB PE=3 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 8.019e-39
Identity = 78/179 (43.58%), Postives = 113/179 (63.13%), Query Frame = 3 
Query:   30 DQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGP*IDPEQFEKVLRYIRSGIESNATLECGGD----RLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDV 554
            + A+  A    FY+ GQ C  G+R +VH+ + + FVE+   R  +  +GDP     + GP ++  Q +KVL YI  G    ATL CGG     +  ++GYF++PT+F+DV DDM IA++EIFGPV S+L+F + D+VI RAN T FGLAAGVFT      + ++  ++AGT WIN Y++
Sbjct:  265 ESAIGGAMLGNFYSTGQVCSNGTRVFVHKNLRERFVERLVERTRKIRIGDPLDEATQMGPLVNRAQRDKVLSYIEKGKAEGATLACGGGVPKLQGFDKGYFIEPTIFTDVTDDMTIAREEIFGPVMSVLEFSDEDEVIARANDTEFGLAAGVFTADIARGHRVIGQIKAGTCWINAYNL 443
[Close]
BLAST of CX302536 vs. ExPASy Swiss-Prot
Match: BETB_BRUSU (Betaine aldehyde dehydrogenase OS=Brucella suis GN=betB PE=3 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 1.786e-38
Identity = 77/179 (43.02%), Postives = 113/179 (63.13%), Query Frame = 3 
Query:   30 DQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGP*IDPEQFEKVLRYIRSGIESNATLECGGD----RLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDV 554
            + A+  A    FY+ GQ C  G+R +VH+ + + F+E+   R  +  +GDPF    + GP I   Q +KVL YI+ G    ATL CGG     +  ++G+F++PTVF+DV D M IA++EIFGPV S+L+F + D+VI RAN + FGLAAGVFT      + ++  ++AGT WIN Y++
Sbjct:  265 ESAIGGAMLGNFYSTGQVCSNGTRVFVHKNIRERFIERLVERTRKIRIGDPFDEATQMGPLISAAQRDKVLSYIKKGKAEGATLACGGGVPKLQGFDKGFFIEPTVFADVTDTMTIAREEIFGPVMSVLEFSDEDEVIARANDSEFGLAAGVFTADLSRGHHVIGQIKAGTCWINAYNL 443
[Close]
BLAST of CX302536 vs. ExPASy Swiss-Prot
Match: BETB_BRUSI (Betaine aldehyde dehydrogenase OS=Brucella suis (strain ATCC 23445 / NCTC 10510) GN=betB PE=3 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 1.786e-38
Identity = 77/179 (43.02%), Postives = 113/179 (63.13%), Query Frame = 3 
Query:   30 DQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGP*IDPEQFEKVLRYIRSGIESNATLECGGD----RLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDV 554
            + A+  A    FY+ GQ C  G+R +VH+ + + F+E+   R  +  +GDPF    + GP I   Q +KVL YI+ G    ATL CGG     +  ++G+F++PTVF+DV D M IA++EIFGPV S+L+F + D+VI RAN + FGLAAGVFT      + ++  ++AGT WIN Y++
Sbjct:  265 ESAIGGAMLGNFYSTGQVCSNGTRVFVHKNIRERFIERLVERTRKIRIGDPFDEATQMGPLISAAQRDKVLSYIKKGKAEGATLACGGGVPKLQGFDKGFFIEPTVFADVTDTMTIAREEIFGPVMSVLEFSDEDEVIARANDSEFGLAAGVFTADLSRGHHVIGQIKAGTCWINAYNL 443
[Close]
BLAST of CX302536 vs. ExPASy Swiss-Prot
Match: BETB_BRUO2 (Betaine aldehyde dehydrogenase OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) GN=betB PE=3 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 1.786e-38
Identity = 77/179 (43.02%), Postives = 113/179 (63.13%), Query Frame = 3 
Query:   30 DQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGP*IDPEQFEKVLRYIRSGIESNATLECGGD----RLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDV 554
            + A+  A    FY+ GQ C  G+R +VH+ + + F+E+   R  +  +GDPF    + GP I   Q +KVL YI+ G    ATL CGG     +  ++G+F++PTVF+DV D M IA++EIFGPV S+L+F + D+VI RAN + FGLAAGVFT      + ++  ++AGT WIN Y++
Sbjct:  265 ESAIGGAMLGNFYSTGQVCSNGTRVFVHKNIRERFIERLVERTRKIRIGDPFDEATQMGPLISAAQRDKVLSYIKKGKAEGATLACGGGVPKLQGFDKGFFIEPTVFADVTDTMTIAREEIFGPVMSVLEFSDEDEVIARANDSEFGLAAGVFTADLSRGHHVIGQIKAGTCWINAYNL 443
[Close]
BLAST of CX302536 vs. ExPASy Swiss-Prot
Match: BETB_BRUME (Betaine aldehyde dehydrogenase OS=Brucella melitensis GN=betB PE=3 SV=2)

HSP 1 Score: 158.688 bits (400), Expect = 1.786e-38
Identity = 77/179 (43.02%), Postives = 113/179 (63.13%), Query Frame = 3 
Query:   30 DQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGP*IDPEQFEKVLRYIRSGIESNATLECGGD----RLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDV 554
            + A+  A    FY+ GQ C  G+R +VH+ + + F+E+   R  +  +GDPF    + GP I   Q +KVL YI+ G    ATL CGG     +  ++G+F++PTVF+DV D M IA++EIFGPV S+L+F + D+VI RAN + FGLAAGVFT      + ++  ++AGT WIN Y++
Sbjct:  265 ESAIGGAMLGNFYSTGQVCSNGTRVFVHKNIRERFIERLVERTRKIRIGDPFDEATQMGPLISAAQRDKVLSYIKKGKAEGATLACGGGVPKLQGFDKGFFIEPTVFADVTDTMTIAREEIFGPVMSVLEFSDEDEVIARANDSEFGLAAGVFTADLSRGHHVIGQIKAGTCWINAYNL 443
[Close]
BLAST of CX302536 vs. ExPASy Swiss-Prot
Match: BETB_BRUMB (Betaine aldehyde dehydrogenase OS=Brucella melitensis biotype 2 (strain ATCC 23457) GN=betB PE=3 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 1.786e-38
Identity = 77/179 (43.02%), Postives = 113/179 (63.13%), Query Frame = 3 
Query:   30 DQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGP*IDPEQFEKVLRYIRSGIESNATLECGGD----RLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDV 554
            + A+  A    FY+ GQ C  G+R +VH+ + + F+E+   R  +  +GDPF    + GP I   Q +KVL YI+ G    ATL CGG     +  ++G+F++PTVF+DV D M IA++EIFGPV S+L+F + D+VI RAN + FGLAAGVFT      + ++  ++AGT WIN Y++
Sbjct:  265 ESAIGGAMLGNFYSTGQVCSNGTRVFVHKNIRERFIERLVERTRKIRIGDPFDEATQMGPLISAAQRDKVLSYIKKGKAEGATLACGGGVPKLQGFDKGFFIEPTVFADVTDTMTIAREEIFGPVMSVLEFSDEDEVIARANDSEFGLAAGVFTADLSRGHHVIGQIKAGTCWINAYNL 443
[Close]
BLAST of CX302536 vs. ExPASy Swiss-Prot
Match: BETB_BRUC2 (Betaine aldehyde dehydrogenase OS=Brucella canis (strain ATCC 23365 / NCTC 10854) GN=betB PE=3 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 1.786e-38
Identity = 77/179 (43.02%), Postives = 113/179 (63.13%), Query Frame = 3 
Query:   30 DQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGP*IDPEQFEKVLRYIRSGIESNATLECGGD----RLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDV 554
            + A+  A    FY+ GQ C  G+R +VH+ + + F+E+   R  +  +GDPF    + GP I   Q +KVL YI+ G    ATL CGG     +  ++G+F++PTVF+DV D M IA++EIFGPV S+L+F + D+VI RAN + FGLAAGVFT      + ++  ++AGT WIN Y++
Sbjct:  265 ESAIGGAMLGNFYSTGQVCSNGTRVFVHKNIRERFIERLVERTRKIRIGDPFDEATQMGPLISAAQRDKVLSYIKKGKAEGATLACGGGVPKLQGFDKGFFIEPTVFADVTDTMTIAREEIFGPVMSVLEFSDEDEVIARANDSEFGLAAGVFTADLSRGHHVIGQIKAGTCWINAYNL 443
[Close]
BLAST of CX302536 vs. ExPASy Swiss-Prot
Match: BETB_BRUAB (Betaine aldehyde dehydrogenase OS=Brucella abortus GN=betB PE=3 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 1.786e-38
Identity = 77/179 (43.02%), Postives = 113/179 (63.13%), Query Frame = 3 
Query:   30 DQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGP*IDPEQFEKVLRYIRSGIESNATLECGGD----RLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDV 554
            + A+  A    FY+ GQ C  G+R +VH+ + + F+E+   R  +  +GDPF    + GP I   Q +KVL YI+ G    ATL CGG     +  ++G+F++PTVF+DV D M IA++EIFGPV S+L+F + D+VI RAN + FGLAAGVFT      + ++  ++AGT WIN Y++
Sbjct:  265 ESAIGGAMLGNFYSTGQVCSNGTRVFVHKNIRERFIERLVERTRKIRIGDPFDEATQMGPLISAAQRDKVLSYIKKGKAEGATLACGGGVPKLQGFDKGFFIEPTVFADVTDTMTIAREEIFGPVMSVLEFSDEDEVIARANDSEFGLAAGVFTADLSRGHHVIGQIKAGTCWINAYNL 443
The following BLAST results are available for this feature:
BLAST of CX302536 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 447
Match NameE-valueIdentityDescription
ALDH5_YEAS73.256e-4044.89Aldehyde dehydrogenase 5, mitochondrial OS=Sacchar... [more]
ALDH5_YEAST7.253e-4044.89Aldehyde dehydrogenase 5, mitochondrial OS=Sacchar... [more]
BETB_OCHA48.019e-3943.58Betaine aldehyde dehydrogenase OS=Ochrobactrum ant... [more]
BETB_BRUSU1.786e-3843.02Betaine aldehyde dehydrogenase OS=Brucella suis GN... [more]
BETB_BRUSI1.786e-3843.02Betaine aldehyde dehydrogenase OS=Brucella suis (s... [more]
BETB_BRUO21.786e-3843.02Betaine aldehyde dehydrogenase OS=Brucella ovis (s... [more]
BETB_BRUME1.786e-3843.02Betaine aldehyde dehydrogenase OS=Brucella meliten... [more]
BETB_BRUMB1.786e-3843.02Betaine aldehyde dehydrogenase OS=Brucella meliten... [more]
BETB_BRUC21.786e-3843.02Betaine aldehyde dehydrogenase OS=Brucella canis (... [more]
BETB_BRUAB1.786e-3843.02Betaine aldehyde dehydrogenase OS=Brucella abortus... [more]

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Properties
Property NameValue
Genbank descriptionC07003G06SK NTLeaf1 Citrus clementina cDNA clone C07003G06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX302536 ID=CX302536; Name=CX302536; organism=Citrus clementina; type=EST; length=561bp
ANNNNNNNNNNNNNNNNNNNNNNNNNNNNGACCAGGCTGTGGAACTTGCA
CACTTTGCTTTGTTCTATAATCAGGGACAATGTTGCTGTGCTGGATCTCG
TACTTATGTACATGAGCGTGTATATGACGAGTTTGTAGAAAAAGCAAAGG
CACGTGCAATGAGGCGTATTGTTGGCGATCCCTTCAAGAGTGGTGTTGAA
CAAGGTCCTTAGATTGATCCAGAGCAATTTGAGAAGGTCCTTAGGTACAT
AAGGTCTGGAATTGAAAGCAATGCAACCCTTGAGTGTGGAGGTGATAGAT
TGGGCAACAGAGGCTACTTTGTTCAGCCAACTGTCTTCTCAGATGTTAAG
GATGACATGTTGATAGCACAGGATGAAATCTTTGGCCCGGTGCAATCCAT
CTTGAAGTTCAAGGAAACTGATGACGTTATAAGAAGAGCAAATAAAACAC
GCTTTGGTCTAGCTGCTGGGGTTTTCACCAAGAGTGCAGACACTGCTAAC
ACCATGATGCGTGCACTGAGAGCTGGGACTGTATGGATTAACTGCTACGA
CGTGTTTGATG
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