CX302544

Overview
NameCX302544
Unique NameCX302544
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length579
Libraries
Library NameType
SaltLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX302544 vs. ExPASy Swiss-Prot
Match: ALDOC_CHICK (Fructose-bisphosphate aldolase C (Fragment) OS=Gallus gallus GN=ALDOC PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 7.811e-32
Identity = 68/137 (49.64%), Postives = 92/137 (67.15%), Query Frame = 1
Query:  100 LLKPSMVTPGAECKEKATPQQVAEYTLKLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMNQGP--NPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEG-ESEEAKKGMFVKGYTY 501
            LLKP+MVTPG  C  K +P+++A  T+  L R +PPAVPG+ FLSGGQSE EA++NLNA+N  P   PW ++FSY RALQ + L  W G+ +N  AA +  + RA+ N LA LGKY G G +S  A + ++V  + Y
Sbjct:    1 LLKPNMVTPGHSCPTKYSPEEIAMATVTALRRTVPPAVPGVTFLSGGQSEEEASINLNAINTCPLVRPWALTFSYGRALQASALSAWRGQRDNANAATEEFVKRAEVNGLAALGKYEGSGDDSGAAGQSLYVANHAY 137          
BLAST of CX302544 vs. ExPASy Swiss-Prot
Match: ALDCA_DANRE (Fructose-bisphosphate aldolase C-A OS=Danio rerio GN=aldoca PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 1.740e-31
Identity = 74/160 (46.25%), Postives = 104/160 (65.00%), Query Frame = 1
Query:   31 VAKKVWAEVFFYLAENNVMFEGILLKPSMVTPGAECKEKATPQQVAEYTLKLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMN--QGPNPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEGESEEAK-KGMFVKGYTY 501
            V ++V A V+  + +++V  EG LLKP+MVTPG  C  K + ++VA  T+  L R +PPAV G+ FLSGGQSE EA++NL+A+N  +   PW ++FS+ RALQ + LKTW G+ EN  AA +  + RA+ NSLA  GKYT  G+S  A     ++  Y Y
Sbjct:  205 VTERVLAAVYKAMFDHHVYLEGTLLKPNMVTPGHGCPTKYSAEEVAMATVTALRRTVPPAVTGVTFLSGGQSEEEASINLSAINNCRLVKPWALTFSFGRALQASALKTWRGQRENEAAATEEFIKRAEINSLASQGKYTVCGDSSGATGLSHYLSSYAY 364          
BLAST of CX302544 vs. ExPASy Swiss-Prot
Match: ALF1_XYLFT (Probable fructose-bisphosphate aldolase class 1 OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=PD_1845 PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 6.843e-28
Identity = 66/141 (46.81%), Postives = 88/141 (62.41%), Query Frame = 1
Query:   31 VAKKVWAEVFFYLAENNVMFEGILLKPSMVTPGAECKEKATPQQVAEYTLKLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMNQ-GPNPWHVSFSYARALQNTCLKTWG-GRPENVKAAQDTLLTRAKANSLAQLGKYTG 447
            V +     +F  L E NV+ EG +LK SMV PG +C+E+A+  +VAE T+  L   +P  +PGI+FLSGGQ++ ++T +LNAMNQ  P PW +SFSY RA+Q   LK W      N   AQ  +  RAK N LA LGK+ G
Sbjct:  194 VTEATLRSLFNALYEQNVVLEGTILKASMVIPGTDCEEQASIDEVAESTVMCLKSTVPAILPGIVFLSGGQTDAQSTAHLNAMNQFDPLPWPLSFSYGRAMQQAALKLWSQDMKGNFAKAQQVVYERAKENGLAALGKWKG 334          
BLAST of CX302544 vs. ExPASy Swiss-Prot
Match: ALF1_XYLFA (Probable fructose-bisphosphate aldolase class 1 OS=Xylella fastidiosa GN=XF_0826 PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 6.843e-28
Identity = 66/141 (46.81%), Postives = 88/141 (62.41%), Query Frame = 1
Query:   31 VAKKVWAEVFFYLAENNVMFEGILLKPSMVTPGAECKEKATPQQVAEYTLKLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMNQ-GPNPWHVSFSYARALQNTCLKTWG-GRPENVKAAQDTLLTRAKANSLAQLGKYTG 447
            V +     +F  L E NV+ EG +LK SMV PG +C+E+A+  +VAE T+  L   +P  +PGI+FLSGGQ++ ++T +LNAMNQ  P PW +SFSY RA+Q   LK W      N   AQ  +  RAK N LA LGK+ G
Sbjct:  194 VTEATLRSLFNALYEQNVVLEGTILKASMVIPGTDCEEQASIDEVAESTVMCLKSTVPAILPGIVFLSGGQTDAQSTAHLNAMNQLDPLPWPLSFSYGRAMQQAALKLWSQDMKGNFAKAQQVVYERAKENGLAALGKWKG 334          
BLAST of CX302544 vs. ExPASy Swiss-Prot
Match: ALF_LYMST (Fructose-bisphosphate aldolase (Fragment) OS=Lymnaea stagnalis PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 2.434e-25
Identity = 56/100 (56.00%), Postives = 72/100 (72.00%), Query Frame = 1
Query:   76 NNVMFEGILLKPSMVTPGAECKEKATPQQVAEYTLKLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMNQ--GPNPWHVSFSYARALQNTCLKTWGGRPE 369
            +N+  EG LLKP+MVT G  C +K TP+ +A  T+  L+R +P AV GI FLSGGQSE +AT+NLNA+NQ  G  PW ++FSY RALQ + LK WGG+ E
Sbjct:    1 HNMFLEGTLLKPNMVTAGQGCPKKYTPEDIARATVTALNRTVPAAVAGITFLSGGQSEEDATINLNAINQFPGRKPWPLTFSYGRALQASVLKAWGGKDE 100          
BLAST of CX302544 vs. ExPASy Swiss-Prot
Match: ALF1_XANAC (Probable fructose-bisphosphate aldolase class 1 OS=Xanthomonas axonopodis pv. citri GN=XAC3344 PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 2.434e-25
Identity = 63/141 (44.68%), Postives = 86/141 (60.99%), Query Frame = 1
Query:   31 VAKKVWAEVFFYLAENNVMFEGILLKPSMVTPGAECKEKATPQQVAEYTLKLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMNQ-GPNPWHVSFSYARALQNTCLKTWG-GRPENVKAAQDTLLTRAKANSLAQLGKYTG 447
            V +     +F  L E NV+ EG +LK SMV  G  C+E+A+ ++VAE T+  L   +P  +PGI+FLSGGQ++ ++T +LN M+Q G  PW +SFSY RA+Q   LK W      N   AQ  +  RAK N LA LGK+ G
Sbjct:  194 VTEATLRSLFGALYEQNVVLEGTILKASMVISGKSCEEQASIEEVAESTVMCLKSTVPAILPGIVFLSGGQTDEQSTAHLNEMHQLGNLPWPLSFSYGRAMQQAALKLWAKDMTGNFAKAQQVIYERAKENGLAALGKWKG 334          
BLAST of CX302544 vs. ExPASy Swiss-Prot
Match: ALF1_XANCP (Probable fructose-bisphosphate aldolase class 1 OS=Xanthomonas campestris pv. campestris GN=XCC3185 PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 4.152e-25
Identity = 63/141 (44.68%), Postives = 86/141 (60.99%), Query Frame = 1
Query:   31 VAKKVWAEVFFYLAENNVMFEGILLKPSMVTPGAECKEKATPQQVAEYTLKLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMNQ-GPNPWHVSFSYARALQNTCLKTWG-GRPENVKAAQDTLLTRAKANSLAQLGKYTG 447
            V +     +F  L E NV+ EG +LK SMV  G  C+E+A+ ++VAE T+  L   +P  +PGI+FLSGGQ++ ++T +LN M+Q G  PW +SFSY RA+Q   LK W      N   AQ  +  RAK N LA LGK+ G
Sbjct:  194 VTEATLRSLFGALYEQNVVLEGTILKASMVISGKGCEEQASVEEVAESTVMCLKSTVPAILPGIVFLSGGQTDEQSTAHLNEMHQLGNLPWPLSFSYGRAMQQAALKLWSKDMTGNYAKAQQIIYERAKENGLAALGKWKG 334          
BLAST of CX302544 vs. ExPASy Swiss-Prot
Match: ALF_ENCCU (Fructose-bisphosphate aldolase OS=Encephalitozoon cuniculi GN=ECU01_0240 PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 3.404e-19
Identity = 53/125 (42.40%), Postives = 75/125 (60.00%), Query Frame = 1
Query:   31 VAKKVWAEVFFYLAENNVMFEGILLKPSMVTPGAECKEKATPQQVAEYTLKLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMN--QGPNPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLL 399
            V +++ + +  YL    V   G+L+K S VT G    EK TP++VA +TL+ L   IP  +PGI+FLSGG    +A   LNA+N  +G   W +SFS+ARAL +  L+TW G   N++ AQ  LL
Sbjct:  196 VTRQILSTLMKYLNYELVYIPGVLIKASYVTSGQLSNEKYTPKKVATFTLRALLSTIPCGIPGIVFLSGGHGSEDAIGFLNAINMERGCRTWSLSFSFARALTDGVLETWRGDDSNIEEAQKILL 320          
The following BLAST results are available for this feature:
BLAST of CX302544 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
ALDOC_CHICK7.811e-3249.64Fructose-bisphosphate aldolase C (Fragment) OS=Gal... [more]
ALDCA_DANRE1.740e-3146.25Fructose-bisphosphate aldolase C-A OS=Danio rerio ... [more]
ALF1_XYLFT6.843e-2846.81Probable fructose-bisphosphate aldolase class 1 OS... [more]
ALF1_XYLFA6.843e-2846.81Probable fructose-bisphosphate aldolase class 1 OS... [more]
ALF_LYMST2.434e-2556.00Fructose-bisphosphate aldolase (Fragment) OS=Lymna... [more]
ALF1_XANAC2.434e-2544.68Probable fructose-bisphosphate aldolase class 1 OS... [more]
ALF1_XANCP4.152e-2544.68Probable fructose-bisphosphate aldolase class 1 OS... [more]
ALF_ENCCU3.404e-1942.40Fructose-bisphosphate aldolase OS=Encephalitozoon ... [more]

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Properties
Property NameValue
Genbank descriptionC07006H05SK SaltLeaf1 Citrus clementina cDNA clone C07006H05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX302544 ID=CX302544; Name=CX302544; organism=Citrus clementina; type=EST; length=579bp
TNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTAGCTAAGAAGGTTTGGGC
TGAAGTTTTCTTCTACCTTGCTGAGAACAATGTCATGTTTGAGGGTATTC
TCCTCAAGCCTAGCATGGTCACTCCTGGTGCTGAATGCAAGGAGAAGGCC
ACACCACAACAGGTTGCTGAGTACACACTCAAGCTCCTTCACAGGAGAAT
CCCTCCAGCTGTCCCCGGAATCATGTTCTTGTCTGGTGGGCAATCTGAGG
TTGAGGCAACCCTCAACTTGAACGCCATGAACCAAGGTCCCAACCCATGG
CACGTATCTTTCTCTTATGCCAGAGCTCTCCAAAACACCTGCCTGAAGAC
ATGGGGTGGCAGGCCAGAGAATGTCAAGGCAGCTCAGGATACTCTGCTCA
CCCGTGCCAAGGCCAACTCACTTGCTCAGCTCGGCAAGTACACTGGCGAG
GGAGAATCAGAGGAGGCCAAGAAAGGAATGTTCGTCAAGGGATACACCTA
CTAAATTTGTTAGCACGAAGATCATAAGAATGGTGAAGAAATTTGAAATG
AGTAGTCATCTCAAATGTGTTAATGCTTT
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