CX305121
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX305121 vs. ExPASy Swiss-Prot
Match: RL5_METBU (50S ribosomal protein L5P OS=Methanococcoides burtonii (strain DSM 6242) GN=rpl5p PE=3 SV=1) HSP 1 Score: 59.6918 bits (143), Expect = 1.112e-13 Identity = 31/76 (40.79%), Postives = 45/76 (59.21%), Query Frame = 3 Query: 306 VLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHID 533 +LE ++GQT V S A+ T+ +F I++ E I C VT+RG+ A LE+ L + E L F G FG++EH D Sbjct: 32 ILETITGQTVVRSYAKRTLPAFTIKKGEPIGCKVTLRGEAAEGFLETSLGIVEKRLNESQFDIFGNVSFGVEEHTD 107 HSP 2 Score: 35.8094 bits (81), Expect = 1.112e-13 Identity = 16/29 (55.17%), Postives = 22/29 (75.86%), Query Frame = 1 Query: 100 LSNPMREIKVQKLVLNISVGESGDRLTRA 186 +SNPMR KV+K+V+++ VGESG L A Sbjct: 1 MSNPMRNPKVEKVVVHMGVGESGQHLVDA 29
BLAST of CX305121 vs. ExPASy Swiss-Prot
Match: RL5_THEAC (50S ribosomal protein L5P OS=Thermoplasma acidophilum GN=rpl5p PE=3 SV=1) HSP 1 Score: 50.447 bits (119), Expect = 1.112e-13 Identity = 27/78 (34.62%), Postives = 43/78 (55.13%), Query Frame = 3 Query: 300 AQVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHID 533 A+VLE L+G + A+ ++R F IR+ I VT+R AM+ L+ VK+Y++ +F G FGI ++ D Sbjct: 29 AKVLEMLTGHKATNTLAKKSIRDFNIRKRLPIGVKVTLRKKDAMEFLQKAFYVKDYKITDYSFDKHGNAYFGISDYTD 106 HSP 2 Score: 45.0542 bits (105), Expect = 1.112e-13 Identity = 19/30 (63.33%), Postives = 26/30 (86.67%), Query Frame = 1 Query: 106 NPMREIKVQKLVLNISVGESGDRLTRAAKV 195 NPM E+ + K+V+NI VG++GDRLT+AAKV Sbjct: 2 NPMEEVIIDKVVVNIGVGQAGDRLTKAAKV 31
BLAST of CX305121 vs. ExPASy Swiss-Prot
Match: RL5_METBF (50S ribosomal protein L5P OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=rpl5p PE=3 SV=1) HSP 1 Score: 65.0846 bits (157), Expect = 1.445e-13 Identity = 31/77 (40.26%), Postives = 47/77 (61.04%), Query Frame = 3 Query: 303 QVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHID 533 ++L ++GQ V A+ T+ +F I++NE I C VT+RG +A Q LE+ L + + L+R F G FGI+EH D Sbjct: 31 EILRNITGQEVVRCFAKRTLPAFSIKKNEPIGCKVTLRGQRAQQFLETALGIVDKTLVRSQFDSLGNVSFGIEEHTD 107 HSP 2 Score: 30.0314 bits (66), Expect = 1.445e-13 Identity = 13/32 (40.62%), Postives = 22/32 (68.75%), Query Frame = 1 Query: 100 LSNPMREIKVQKLVLNISVGESGDRLTRAAKV 195 +SN MR V+K+++++ VGESG L A ++ Sbjct: 1 MSNVMRTPVVEKVIVHMGVGESGQHLVDAEEI 32
BLAST of CX305121 vs. ExPASy Swiss-Prot
Match: RL5_SULAC (50S ribosomal protein L5P OS=Sulfolobus acidocaldarius GN=rpl5p PE=3 SV=1) HSP 1 Score: 56.225 bits (134), Expect = 4.109e-13 Identity = 25/76 (32.89%), Postives = 45/76 (59.21%), Query Frame = 3 Query: 303 QVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHI 530 Q++++L+G PV++K R ++R FG+R+ I T+R A++ L+ L + L + +F + G FGI EH+ Sbjct: 38 QLVQELTGVKPVYTKGRKSIREFGVRKGAPIGVKATLRRQAAVEFLKKVLPAVNFRLKQSSFDNYGNVSFGIAEHV 113 HSP 2 Score: 37.3502 bits (85), Expect = 4.109e-13 Identity = 17/38 (44.74%), Postives = 25/38 (65.79%), Query Frame = 1 Query: 91 EKKLSNPMREIKVQKLVLNISVGESGDRLTRAAKVFNE 204 E K N MR + + K+ +NI VGESG+RL +A ++ E Sbjct: 5 EAKKENVMRRVVLDKVTVNIGVGESGERLQKAYQLVQE 42
BLAST of CX305121 vs. ExPASy Swiss-Prot
Match: RL5_CALMQ (50S ribosomal protein L5P OS=Caldivirga maquilingensis (strain DSMZ 13496 / IC-167) GN=rpl5p PE=3 SV=1) HSP 1 Score: 55.4546 bits (132), Expect = 6.909e-13 Identity = 29/77 (37.66%), Postives = 47/77 (61.04%), Query Frame = 3 Query: 300 AQVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHI 530 A+V+ +L+G+TP + A +++ FGIRR E I VT+R ++A+ L L ++ L +F + G FGI+EHI Sbjct: 57 AKVMSELTGRTPSYRLAHKSIKDFGIRRGEPIGLLVTLRRNEAVWFLLRALAAVDFTLREESF-NAGNVSFGIREHI 132 HSP 2 Score: 37.3502 bits (85), Expect = 6.909e-13 Identity = 15/33 (45.45%), Postives = 25/33 (75.76%), Query Frame = 1 Query: 106 NPMREIKVQKLVLNISVGESGDRLTRAAKVFNE 204 +PMR I + + +N+ +G+SG+RL +AAKV +E Sbjct: 30 HPMRRIFIWSVAVNMGIGQSGERLEKAAKVMSE 62
BLAST of CX305121 vs. ExPASy Swiss-Prot
Match: RL5_PYRAE (50S ribosomal protein L5P OS=Pyrobaculum aerophilum GN=rpl5p PE=3 SV=1) HSP 1 Score: 56.225 bits (134), Expect = 9.004e-13 Identity = 31/83 (37.35%), Postives = 50/83 (60.24%), Query Frame = 3 Query: 300 AQVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIK 545 A +L++L+G P +A+ +++ FGIR+ E I VT+R D+A+ L L+ + + +F D G FGI+EHI L G+K Sbjct: 40 AGLLKELTGAEPSRRRAKKSIKDFGIRKGEPIGVAVTLRRDQAVNFLMRALQAVNNRVKKTSFDDRGNVCFGIKEHILLPGVK 122 HSP 2 Score: 36.1946 bits (82), Expect = 9.004e-13 Identity = 15/33 (45.45%), Postives = 25/33 (75.76%), Query Frame = 1 Query: 106 NPMREIKVQKLVLNISVGESGDRLTRAAKVFNE 204 +PM+ I ++K+V+NI VG SG++L +AA + E Sbjct: 13 HPMQRIYIEKVVVNIGVGASGEKLEKAAGLLKE 45
BLAST of CX305121 vs. ExPASy Swiss-Prot
Match: RL5_METLZ (50S ribosomal protein L5P OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=rpl5p PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 9.016e-13 Identity = 39/85 (45.88%), Postives = 49/85 (57.65%), Query Frame = 3 Query: 291 LYNAQ--VLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYE--LLRRNFSDTGCFGFGIQEHID 533 L NA+ + + G P+ S AR T+ +FGIR+ + I C T+RG KAM LE LK E L R F TG FGFGI+EH D Sbjct: 25 LVNAENIMADLTKGAKPIRSYARNTLPAFGIRKGQPIGCKATLRGKKAMDFLEMALKTYAVENVLHTRQFDATGNFGFGIEEHTD 109 HSP 2 Score: 25.7942 bits (55), Expect = 9.016e-13 Identity = 10/23 (43.48%), Postives = 17/23 (73.91%), Query Frame = 1 Query: 127 VQKLVLNISVGESGDRLTRAAKV 195 V K+V+++ VGE+G+RL A + Sbjct: 9 VAKVVVHMGVGEAGERLVNAENI 31
BLAST of CX305121 vs. ExPASy Swiss-Prot
Match: RL5_NANEQ (50S ribosomal protein L5P OS=Nanoarchaeum equitans GN=rpl5p PE=3 SV=1) HSP 1 Score: 53.1434 bits (126), Expect = 9.022e-13 Identity = 31/77 (40.26%), Postives = 50/77 (64.94%), Query Frame = 3 Query: 303 QVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLL-ESGLKVKEYELLRRNFSDTGCFGFGIQEHI 530 ++L++L+GQ PV +KA+ V + IR I VT+RG+KA ++L E L ++++ +F+D G FGFGI E+I Sbjct: 31 ELLKRLTGQKPVKTKAKVRVEQWHIRPGLPIGVKVTLRGEKAYKILKEKLLPAVDFKIKASSFTDRG-FGFGIPEYI 106 HSP 2 Score: 39.2762 bits (90), Expect = 9.022e-13 Identity = 15/29 (51.72%), Postives = 25/29 (86.21%), Query Frame = 1 Query: 100 LSNPMREIKVQKLVLNISVGESGDRLTRA 186 + +PMR+I+++K+ LNI VGESG++L +A Sbjct: 1 MEHPMRKIRIEKVTLNIGVGESGEKLDKA 29
BLAST of CX305121 vs. ExPASy Swiss-Prot
Match: RL5_CENSY (50S ribosomal protein L5P OS=Cenarchaeum symbiosum GN=rpl5p PE=3 SV=1) HSP 1 Score: 60.4622 bits (145), Expect = 1.522e-12 Identity = 34/82 (41.46%), Postives = 47/82 (57.32%), Query Frame = 3 Query: 303 QVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIK 545 + L ++SG+ P A T R FG+R+ E I VT+RG+ A L + K ++ R+F D G F FGI EHID+ GIK Sbjct: 31 RALGEISGKKPCGRDAHETQRDFGVRKGEPIGAAVTIRGEDAGALARRLFEAKGGQVKGRSFDDFGNFSFGIGEHIDIPGIK 112 HSP 2 Score: 31.187 bits (69), Expect = 1.522e-12 Identity = 13/35 (37.14%), Postives = 24/35 (68.57%), Query Frame = 1 Query: 100 LSNPMREIKVQKLVLNISVGESGDRLTRAAKVFNE 204 ++ MR+I ++K+VLN+ VG+SG+ + A + E Sbjct: 1 MAGDMRKITLEKVVLNMGVGQSGNAVEVAKRALGE 35
BLAST of CX305121 vs. ExPASy Swiss-Prot
Match: RL5_METST (50S ribosomal protein L5P OS=Methanosphaera stadtmanae (strain DSM 3091) GN=rpl5p PE=3 SV=1) HSP 1 Score: 58.9214 bits (141), Expect = 2.567e-12 Identity = 32/82 (39.02%), Postives = 49/82 (59.76%), Query Frame = 3 Query: 303 QVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIK 545 +++E L Q PV + ++ T FGIR+ + IAC VT+RG+KA +++ L E + F G FGI+EHID+ G+K Sbjct: 30 KLIETLVDQKPVRTYSKVTNPEFGIRKKQPIACKVTLRGEKADKIISMVLSGLENRIKASQFDKEGNVSFGIREHIDIPGVK 111 HSP 2 Score: 31.9574 bits (71), Expect = 2.567e-12 Identity = 14/30 (46.67%), Postives = 21/30 (70.00%), Query Frame = 1 Query: 106 NPMREIKVQKLVLNISVGESGDRLTRAAKV 195 N M++ + K +NI VGE G++LTRA K+ Sbjct: 2 NVMQKPFIAKATINIGVGEGGEKLTRAEKL 31 The following BLAST results are available for this feature:
BLAST of CX305121 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
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Sequences
The
following sequences are available for this feature:
EST sequence >CX305121 ID=CX305121; Name=CX305121; organism=Citrus clementina; type=EST; length=547bpback to top |