CX305186

Overview
NameCX305186
Unique NameCX305186
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length599
Libraries
Library NameType
Drought1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig8083 contig Ccv1_Contig8083:661..1259. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX305186 vs. ExPASy Swiss-Prot
Match: LDOX_ARATH (Leucoanthocyanidin dioxygenase OS=Arabidopsis thaliana GN=LDOX PE=1 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 8.977e-26
Identity = 65/150 (43.33%), Postives = 94/150 (62.67%), Query Frame = 2
Query:   11 GLGLKTDRL-KEKTFLEGRM--MVGHYYPYCPQPDLTVGITSHTDPGPLTILLQDDKGGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRALANSSLEPRISIAVFFNPSERDSLYGPFPELISPEKPARFRQLTYTDYV 451
            GLGL+ DRL KE   LE  +  M  +YYP CPQP+L +G+ +HTD   LT +L +   GLQ+ +  +WV  K VP ++V++IGD L+I+SN +Y S+ HR L N   + RIS AVF  P +   +  P PE++S E PA+F   T+  ++
Sbjct:  190 GLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKE-KVRISWAVFCEPPKDKIVLKPLPEMVSVESPAKFPPRTFAQHI 338          
BLAST of CX305186 vs. ExPASy Swiss-Prot
Match: FL3H_DIACA (Naringenin,2-oxoglutarate 3-dioxygenase OS=Dianthus caryophyllus GN=FHT PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.172e-25
Identity = 64/159 (40.25%), Postives = 93/159 (58.49%), Query Frame = 2
Query:    8 EGLGLKTDRLKEKTFLEGRMMVGHYYPYCPQPDLTVGITSHTDPGPLTILLQDDKGGLQIKH--GEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRALANSSLEPRISIAVFFNPSERDSLYGPFPELISPEKPARFRQLTYTDYVTRFFTKQLD 478
            E +GL+ + L +      + +V +YYP CPQPDLT+G+  HTDPG +T+LLQD  GGLQ     G+ W+ V+PVPGA V+N+GD    +SN  + + +H+A+ NS    R+SIA F NPS   ++Y P   +   E       +T+ D   R   K L+
Sbjct:  178 EAMGLELEALTKACVDMDQKIVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATRDGGKTWITVQPVPGAFVVNLGDHGHFLSNGRFKNADHQAVVNSECS-RLSIATFQNPSPDATVY-PL-AIREGENSIMEEPITFADLYRRKMAKDLE 333          
BLAST of CX305186 vs. ExPASy Swiss-Prot
Match: FL3H_CALCH (Naringenin,2-oxoglutarate 3-dioxygenase OS=Callistephus chinensis GN=FHT PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 2.612e-25
Identity = 58/126 (46.03%), Postives = 81/126 (64.29%), Query Frame = 2
Query:    8 EGLGLKTDRLKEKTFLEGRMMVGHYYPYCPQPDLTVGITSHTDPGPLTILLQDDKGGLQIKH--GEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRALANSSLEPRISIAVFFNPSERDSLY 379
            E +GL+ + L +      + +V +YYP CPQPDLT+G+  HTDPG +T+LLQD  GGLQ     GE W+ VKPV GA V+N+GD    +SN  + + +H+A+ NSS   R+SIA F NP+    +Y
Sbjct:  175 EAMGLEKEALTKACVDMDQKVVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATRDGGESWITVKPVEGAFVVNLGDHGHYLSNGRFKNADHQAVVNSSTS-RLSIATFQNPAPEAIVY 299          
BLAST of CX305186 vs. ExPASy Swiss-Prot
Match: FNSI_PETCR (Flavone synthase OS=Petroselinum crispum GN=FNSI PE=1 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 4.455e-25
Identity = 66/163 (40.49%), Postives = 99/163 (60.74%), Query Frame = 2
Query:    8 EGLGL-KTDRLKEKTFLEGRMMVGHYYPYCPQPDLTVGITSHTDPGPLTILLQDDKGGLQIKH--GEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRALANSSLEPRISIAVFFNPSERDSLYGPFPELISPEKPARFRQLTYTDYVTRFFTKQLDGKT 487
            E +GL K D  K    +E ++++ +YYP CPQPDLT+G+  HTDPG +TILLQD  GGLQ     G+ W+ V+PV GA V+N+GD    +SN  + + +H+A+ NS+   R+SIA F NP++   +Y P  ++   EK      +TY +   +  TK ++  T
Sbjct:  178 EAMGLEKGDLTKACVDMEQKVLI-NYYPTCPQPDLTLGVRRHTDPGTITILLQDMVGGLQATRDGGKTWITVQPVEGAFVVNLGDHGHYLSNGRFRNADHQAVVNST-SSRLSIATFQNPAQNAIVY-PL-KIREGEKAILDEAITYAEMYKKCMTKHIEVAT 336          
BLAST of CX305186 vs. ExPASy Swiss-Prot
Match: LDOX_MAIZE (Leucoanthocyanidin dioxygenase OS=Zea mays GN=A2 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 9.926e-25
Identity = 55/132 (41.67%), Postives = 77/132 (58.33%), Query Frame = 2
Query:   77 HYYPYCPQPDLTVGITSHTDPGPLTILLQDDKGGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRALANSSLEPRISIAVFFNPSERDSLYGPFPELISPEKPARFRQLTYTDYVTRFFTKQ 472
            +YYP CPQP+L VG+ +HTD   L+ +L +   GLQ+ HG  WV  +  PG +++++GD L+I+SN  Y SV HR L N     RIS  VF  P     L  P PEL++   PARF   T+  ++ R   K+
Sbjct:  237 NYYPRCPQPELAVGVEAHTDVSALSFILHNGVPGLQVLHGARWVTARHEPGTIIVHVGDALEILSNGRYTSVLHRGLVNRE-AVRISWVVFCEPPPDSVLLHPLPELVTEGHPARFTPRTFKQHLDRKLFKK 367          
BLAST of CX305186 vs. ExPASy Swiss-Prot
Match: FLS_CITUN (Flavonol synthase/flavanone 3-hydroxylase OS=Citrus unshiu GN=FLS PE=1 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.296e-24
Identity = 58/148 (39.19%), Postives = 91/148 (61.49%), Query Frame = 2
Query:   11 GLGLKTDRLKEKTFLEG--RMMVGHYYPYCPQPDLTVGITSHTDPGPLTILLQDDKGGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRALANSSLEPRISIAVFFNPSERDSLYGPFPELISPEKPARFRQLTYTDY 448
            GLG++   LKE    +    M+  +YYP CP+PDL +G+ +HTD   LT+L+ ++  GLQ+   + W+D K +P ALVI+IGD ++I+SN +Y +V HR   N   + R+S  VF  P   D++ GP P+L+  E P +++   + DY
Sbjct:  180 GLGVEGGVLKEAAGGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNEVPGLQVFKDDRWIDAKYIPNALVIHIGDQIEILSNGKYKAVLHRTTVNKD-KTRMSWPVFLEP-PADTVVGPLPQLVDDENPPKYKAKKFKDY 325          
BLAST of CX305186 vs. ExPASy Swiss-Prot
Match: FL3H_HORVU (Naringenin,2-oxoglutarate 3-dioxygenase OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.296e-24
Identity = 62/159 (38.99%), Postives = 94/159 (59.12%), Query Frame = 2
Query:    8 EGLGLKTDRLKEKTFLEGRMMVGHYYPYCPQPDLTVGITSHTDPGPLTILLQDDKGGLQIKH--GEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRALANSSLEPRISIAVFFNPSERDSLYGPFPELISPEKPARFRQLTYTDYVTRFFTKQLD 478
            E +GL+T+ L +      + +V ++YP CPQPDLT+G+  HTDPG +T+LLQD  GGLQ     G+ W+ V+P+ GA V+N+GD    MSN  + + +H+A+ N     R+SIA F NP+  D+   P   +   E+P     +T+T+   R   + LD
Sbjct:  180 EAMGLETEALAKACVDMDQKVVVNFYPRCPQPDLTLGLKRHTDPGTITLLLQDLVGGLQATRDGGKNWITVQPISGAFVVNLGDHGHFMSNGRFKNADHQAVVNGE-SSRLSIATFQNPAP-DARVWPL-AVREGEEPILEEPITFTEMYRRKMERDLD 335          
BLAST of CX305186 vs. ExPASy Swiss-Prot
Match: LDOX_MALDO (Leucoanthocyanidin dioxygenase OS=Malus domestica GN=ANS PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.211e-24
Identity = 62/150 (41.33%), Postives = 92/150 (61.33%), Query Frame = 2
Query:   11 GLGLKTDRL-KEKTFLEGRM--MVGHYYPYCPQPDLTVGITSHTDPGPLTILLQDDKGGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRALANSSLEPRISIAVFFNPSERDSLYGPFPELISPEKPARFRQLTYTDYV 451
            GLGL   RL KE   LE  +  M  +YYP CPQP+L +G+ +HTD   LT +L +   GLQ+ +  +WV  K VP ++V++IGD L+I+SN +Y S+ HR + N   + RIS AVF  P +   +  P PE +S ++PA F   T+ +++
Sbjct:  194 GLGLDEGRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLFYEGKWVTAKCVPNSIVMHIGDTLEILSNGKYKSILHRGMVNKE-KVRISWAVFCEPPKEKIILKPLPETVSEDEPAMFPPRTFAEHI 342          
BLAST of CX305186 vs. ExPASy Swiss-Prot
Match: FLS_MALDO (Flavonol synthase/flavanone 3-hydroxylase OS=Malus domestica GN=FLS PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.211e-24
Identity = 64/150 (42.67%), Postives = 89/150 (59.33%), Query Frame = 2
Query:   11 GLGLKTDRLKEKTF---LEGRMMVGHYYPYCPQPDLTVGITSHTDPGPLTILLQDDKGGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRALANSSLEPRISIAVFFNPSERDSLYGPFPELISPEKPARFRQLTYTDYV 451
            GLGL+   LK+      LE  + + +YYP CP+PDL +G+ +HTD   +TIL+ +D  GLQ      W DVK +P ALVI+IGD ++IMSN +Y SV HR   N   + RIS  VF  P   D + GP P+L++     +++   Y DYV
Sbjct:  182 GLGLEGQELKKAAGGDNLEYLLKI-NYYPPCPRPDLALGVVAHTDMSTVTILVPNDVQGLQACKDGRWYDVKYIPNALVIHIGDQMEIMSNGKYTSVLHRTTVNKD-KTRISWPVFLEP-PADHVVGPHPQLVNAVNQPKYKTKKYGDYV 328          
BLAST of CX305186 vs. ExPASy Swiss-Prot
Match: FL3H_PETCR (Flavanone 3-dioxygenase OS=Petroselinum crispum GN=FHT PE=1 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 2.888e-24
Identity = 60/163 (36.81%), Postives = 98/163 (60.12%), Query Frame = 2
Query:    8 EGLGLKTDRLKEKTFLEGRMMVGHYYPYCPQPDLTVGITSHTDPGPLTILLQDDKGGLQIKH--GEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRALANSSLEPRISIAVFFNPSERDSLYGPFPELISPEKPARFRQLTYTDYVTRFFTKQLDGKTL 490
            E +GL+ + L +      + ++ +YYP CPQP+LT+G+  HTDPG +T+LLQD  GGLQ     G+ W+ V+PV GA V+N+GD    +SN  + + +H+A+ NS+   R+SIA F NP+   ++Y P  ++   EK      +T+ +   R  ++ ++  TL
Sbjct:  178 EAMGLEKEGLTKACVDMDQKVIVNYYPKCPQPNLTLGLKRHTDPGTITLLLQDQVGGLQATRDGGKTWITVQPVEGAFVVNLGDHGHYLSNGRFKNADHQAVVNSN-SSRMSIATFQNPAPNATVY-PL-KIREGEKAVMEEPITFAEMYKRKMSRDIEMATL 337          
The following BLAST results are available for this feature:
BLAST of CX305186 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 83
Match NameE-valueIdentityDescription
LDOX_ARATH8.977e-2643.33Leucoanthocyanidin dioxygenase OS=Arabidopsis thal... [more]
FL3H_DIACA1.172e-2540.25Naringenin,2-oxoglutarate 3-dioxygenase OS=Dianthu... [more]
FL3H_CALCH2.612e-2546.03Naringenin,2-oxoglutarate 3-dioxygenase OS=Callist... [more]
FNSI_PETCR4.455e-2540.49Flavone synthase OS=Petroselinum crispum GN=FNSI P... [more]
LDOX_MAIZE9.926e-2541.67Leucoanthocyanidin dioxygenase OS=Zea mays GN=A2 P... [more]
FLS_CITUN1.296e-2439.19Flavonol synthase/flavanone 3-hydroxylase OS=Citru... [more]
FL3H_HORVU1.296e-2438.99Naringenin,2-oxoglutarate 3-dioxygenase OS=Hordeum... [more]
LDOX_MALDO2.211e-2441.33Leucoanthocyanidin dioxygenase OS=Malus domestica ... [more]
FLS_MALDO2.211e-2442.67Flavonol synthase/flavanone 3-hydroxylase OS=Malus... [more]
FL3H_PETCR2.888e-2436.81Flavanone 3-dioxygenase OS=Petroselinum crispum GN... [more]

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Properties
Property NameValue
Genbank descriptionC18002C02Rv Drought1 Citrus clementina cDNA clone C18002C02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX305186 ID=CX305186; Name=CX305186; organism=Citrus clementina; type=EST; length=599bp
GCGGGGTGAAGGTTTGGGGTTGAAAACCGATAGGTTGAAGGAAAAGACCT
TCCTGGAAGGGAGGATGATGGTGGGCCATTATTATCCCTACTGTCCGCAG
CCTGATCTGACAGTGGGGATCACATCTCATACTGATCCAGGGCCATTGAC
AATCTTGTTGCAAGATGATAAAGGTGGGCTGCAAATTAAGCATGGTGAGG
AATGGGTGGATGTTAAACCAGTTCCAGGAGCTCTGGTTATTAACATTGGG
GATATACTTCAGATTATGTCCAATGATGAATACATAAGTGTAGAGCATAG
AGCATTGGCTAATTCGTCCCTGGAACCACGAATCTCAATTGCTGTTTTCT
TCAATCCAAGCGAGAGGGACAGCCTTTATGGACCATTCCCGGAGCTGATA
TCCCCAGAGAAGCCAGCTCGTTTTCGGCAGCTCACATACACAGACTATGT
AACAAGGTTCTTCACAAAACAGTTAGATGGAAAAACATTGGTGAATTACT
ATAGGCTGTAAGAAACAAAACTTGGTAAATCTGGTTGTTTGTGCCTGTAT
AAACTATTCTTACGTAAGAATAACAATTCAATTGTTCGTCTCATAAAAA
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