CX305227
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX305227 vs. ExPASy Swiss-Prot
Match: ADF2_ORYSJ (Actin-depolymerizing factor 2 OS=Oryza sativa subsp. japonica GN=ADF2 PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 7.857e-21 Identity = 43/70 (61.43%), Postives = 59/70 (84.29%), Query Frame = -1 Query: 192 YDFDFVTDKNCQKSKIIFIAWSPDPSKVRSKMIYASSKDRFKRELDGIQVKLQATDPTEMGLDVMKTRSN 401 YDFDFVT +N QKSKI FIAWSP S++R+KM+Y++SKDR K+ELDG ++QATDPTE+ L+V++ R++ Sbjct: 76 YDFDFVTGENVQKSKIFFIAWSPSTSRIRAKMLYSTSKDRIKQELDGFHYEIQATDPTEVDLEVLRERAH 145
BLAST of CX305227 vs. ExPASy Swiss-Prot
Match: ADF5_ARATH (Actin-depolymerizing factor 5 OS=Arabidopsis thaliana GN=ADF5 PE=1 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 1.340e-20 Identity = 43/69 (62.32%), Postives = 58/69 (84.06%), Query Frame = -1 Query: 195 YDFDFVTDKNCQKSKIIFIAWSPDPSKVRSKMIYASSKDRFKRELDGIQVKLQATDPTEMGLDVMKTRS 401 +DFDFVT NC+KSKI FIAWSP+ SK+R+K++YA+SKD +R L+GI +LQATDPTEMG D+++ R+ Sbjct: 74 FDFDFVTVDNCRKSKIFFIAWSPEASKIRAKILYATSKDGLRRVLEGIHYELQATDPTEMGFDIIQDRA 142
BLAST of CX305227 vs. ExPASy Swiss-Prot
Match: ADF6_ARATH (Actin-depolymerizing factor 6 OS=Arabidopsis thaliana GN=ADF6 PE=1 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 1.750e-20 Identity = 42/70 (60.00%), Postives = 57/70 (81.43%), Query Frame = -1 Query: 192 YDFDFVTDKNCQKSKIIFIAWSPDPSKVRSKMIYASSKDRFKRELDGIQVKLQATDPTEMGLDVMKTRSN 401 YDFDFVT +NCQKSKI F AWSP S +R+K++Y++SKD+ REL GI ++QATDPTE+ L+V++ R+N Sbjct: 77 YDFDFVTSENCQKSKIFFFAWSPSTSGIRAKVLYSTSKDQLSRELQGIHYEIQATDPTEVDLEVLRERAN 146
BLAST of CX305227 vs. ExPASy Swiss-Prot
Match: ADF10_ORYSJ (Actin-depolymerizing factor 10 OS=Oryza sativa subsp. japonica GN=ADF10 PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 4.311e-19 Identity = 39/70 (55.71%), Postives = 57/70 (81.43%), Query Frame = -1 Query: 192 YDFDFVTDKNCQKSKIIFIAWSPDPSKVRSKMIYASSKDRFKRELDGIQVKLQATDPTEMGLDVMKTRSN 401 YD DFV+D NC+KSKI FI+WSP S++R+K IYA S+++F+ ELDG+ ++QATDP +M L+V++ R+N Sbjct: 80 YDLDFVSDDNCRKSKIFFISWSPSVSRIRAKTIYAVSRNQFRHELDGVHFEIQATDPDDMDLEVLRGRAN 149
BLAST of CX305227 vs. ExPASy Swiss-Prot
Match: ADF4_ORYSJ (Actin-depolymerizing factor 4 OS=Oryza sativa subsp. japonica GN=ADF4 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 2.140e-18 Identity = 41/68 (60.29%), Postives = 56/68 (82.35%), Query Frame = -1 Query: 198 YDFDFVTDKNCQKSKIIFIAWSPDPSKVRSKMIYASSKDRFKRELDGIQVKLQATDPTEMGLDVMKTR 401 YDFDF+T ++ KS+I +I WSPD +KVRSKM+YASS +RFK+EL+GIQ+++QATD E+ LD +K R Sbjct: 70 YDFDFLTAEDVPKSRIFYILWSPDNAKVRSKMLYASSNERFKKELNGIQLEVQATDAGEISLDALKDR 137
BLAST of CX305227 vs. ExPASy Swiss-Prot
Match: ADF5_ORYSJ (Actin-depolymerizing factor 5 OS=Oryza sativa subsp. japonica GN=ADF5 PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 2.794e-18 Identity = 40/69 (57.97%), Postives = 55/69 (79.71%), Query Frame = -1 Query: 195 YDFDFVTDKNCQKSKIIFIAWSPDPSKVRSKMIYASSKDRFKRELDGIQVKLQATDPTEMGLDVMKTRS 401 +DFDFVT NCQKSKI FIAWSP S++R+K++YA+SK +R LDG+ ++QATD +EMG DV++ R+ Sbjct: 74 FDFDFVTVDNCQKSKIFFIAWSPTASRIRAKILYATSKQGLRRVLDGVHYEVQATDSSEMGYDVIRGRA 142
BLAST of CX305227 vs. ExPASy Swiss-Prot
Match: ADF9_ARATH (Actin-depolymerizing factor 9 OS=Arabidopsis thaliana GN=ADF9 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 4.767e-18 Identity = 39/69 (56.52%), Postives = 53/69 (76.81%), Query Frame = -1 Query: 195 YDFDFVTDKNCQKSKIIFIAWSPDPSKVRSKMIYASSKDRFKRELDGIQVKLQATDPTEMGLDVMKTRS 401 +DFD+VT NC+ SKI FI WSP+ S++R KM+YA+SK +R LDG+ +LQATDPTEMG D ++ R+ Sbjct: 61 FDFDYVTVDNCRMSKIFFITWSPEASRIREKMMYATSKSGLRRVLDGVHYELQATDPTEMGFDKIQDRA 129
BLAST of CX305227 vs. ExPASy Swiss-Prot
Match: ADF8_ORYSJ (Putative actin-depolymerizing factor 8 OS=Oryza sativa subsp. japonica GN=ADF8 PE=3 SV=2) HSP 1 Score: 88.1965 bits (217), Expect = 1.387e-17 Identity = 38/70 (54.29%), Postives = 55/70 (78.57%), Query Frame = -1 Query: 192 YDFDFVTDKNCQKSKIIFIAWSPDPSKVRSKMIYASSKDRFKRELDGIQVKLQATDPTEMGLDVMKTRSN 401 YD DFV+D NC+KSKI FI+WSP S +R+K IYA +++F+ ELDG+ ++QATDP +M L+V++ R+N Sbjct: 75 YDLDFVSDDNCRKSKIFFISWSPSLSCIRAKTIYAVWRNQFRHELDGVHFEIQATDPDDMDLEVLRGRAN 144
BLAST of CX305227 vs. ExPASy Swiss-Prot
Match: ADF3_MAIZE (Actin-depolymerizing factor 3 OS=Zea mays GN=ADF3 PE=1 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 1.387e-17 Identity = 41/69 (59.42%), Postives = 55/69 (79.71%), Query Frame = -1 Query: 195 YDFDFVTDKNCQKSKIIFIAWSPDPSKVRSKMIYASSKDRFKRELDGIQVKLQATDPTEMGLDVMKTRS 401 YDFDFVT ++ QKS+I +I WSP +KV+SKM+YASS +FK L+GIQV+LQATD +E+ LD +K R+ Sbjct: 70 YDFDFVTAEDVQKSRIFYILWSPSSAKVKSKMLYASSNQKFKSGLNGIQVELQATDASEISLDEIKDRA 138
BLAST of CX305227 vs. ExPASy Swiss-Prot
Match: ADF3_ORYSJ (Actin-depolymerizing factor 3 OS=Oryza sativa subsp. japonica GN=ADF3 PE=1 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 1.099e-14 Identity = 34/58 (58.62%), Postives = 48/58 (82.76%), Query Frame = -1 Query: 192 KSKIIFIAWSPDPSKVRSKMIYASSKDRFKRELDGIQVKLQATDPTEMGLDVMKTRSN 365 +SKI F++WSP + VRSKM+YASS + FK+ELDG+Q+ LQATDP+E+ LDV+K ++ Sbjct: 93 RSKIFFVSWSPAAADVRSKMVYASSNEGFKKELDGVQIDLQATDPSELTLDVLKDHTS 150 The following BLAST results are available for this feature:
BLAST of CX305227 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 35
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Sequences
The
following sequences are available for this feature:
EST sequence >CX305227 ID=CX305227; Name=CX305227; organism=Citrus clementina; type=EST; length=401bpback to top |