CX305572
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX305572 vs. ExPASy Swiss-Prot
Match: LOX4_ARATH (Lipoxygenase 4, chloroplastic OS=Arabidopsis thaliana GN=LOX4 PE=2 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 9.568e-43 Identity = 77/146 (52.74%), Postives = 100/146 (68.49%), Query Frame = 3 Query: 9 RGLAVEDPSAPHGLKPTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVQSDEQLQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHATVNFGQYTYRGYFPNRPTTARCNIATENPSDEQWKFFLEKPE 446 RG+AV DP+ PHGLK +EDYP+ANDGL LW AI+ WV YV YY + +L+Q+D +LQAW++E VGH D + WWP L T +DL+ +ITTI+W+ S HA +NFGQY Y GY PNRP R I E SD ++ F+E P+ Sbjct: 675 RGMAVPDPTQPHGLKLLVEDYPYANDGLLLWSAIQTWVRTYVERYYANSNLIQTDTELQAWYSESINVGHADHRDAEWWPKLSTVEDLVSVITTIIWLASAQHAALNFGQYPYGGYVPNRPPLMRRLIPDE--SDPEFTSFIEDPQ 818
BLAST of CX305572 vs. ExPASy Swiss-Prot
Match: LOX1_ARATH (Lipoxygenase 1 OS=Arabidopsis thaliana GN=LOX1 PE=1 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 1.632e-42 Identity = 74/132 (56.06%), Postives = 96/132 (72.73%), Query Frame = 3 Query: 9 RGLAVEDPSAPHGLKPTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVQSDEQLQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHATVNFGQYTYRGYFPNRPTTARCNIATEN 404 RG+AVEDP APHGL+ I+DYP+A DGL++W AI+ WV DY+ +Y + +Q+D +LQAWW E+R GHGDKK EPWWP ++T ++L+E T I+WV S HA VNFGQY GY PNRPT +R + EN Sbjct: 609 RGMAVEDPEAPHGLRLRIKDYPYAVDGLEVWYAIESWVRDYIFLFYKIEEDIQTDTELQAWWKEVREEGHGDKKSEPWWPKMQTREELVESCTIIIWVASALHAAVNFGQYPVAGYLPNRPTISRQYMPKEN 740
BLAST of CX305572 vs. ExPASy Swiss-Prot
Match: LOX6_ORYSJ (Probable lipoxygenase 6 OS=Oryza sativa subsp. japonica GN=Os03g0179900 PE=2 SV=2) HSP 1 Score: 169.088 bits (427), Expect = 8.100e-42 Identity = 78/151 (51.66%), Postives = 94/151 (62.25%), Query Frame = 3 Query: 9 RGLAVEDPSAPHGLKPTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVQSDEQLQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHATVNFGQYTYRGYFPNRPTTARCNIATENPSDEQWKFFLEKPENALLN 461 RG+AVED + PHG++ IEDYP+ANDGL LW AI+ WV YV YYPD VQ D +LQ W+ E VGHGD +H PWWP L TP DL I+TT+VW+ S HA +NFGQY GY PNRP R + ++ FL P LN Sbjct: 663 RGVAVEDATQPHGVRLLIEDYPYANDGLLLWSAIRSWVESYVQLYYPDAGTVQCDLELQGWYHESIHVGHGDLRHAPWWPPLSTPVDLASILTTLVWLASAQHAALNFGQYPLGGYVPNRPPLIRRLLPDLERDAAEYAAFLADPHRFFLN 813
BLAST of CX305572 vs. ExPASy Swiss-Prot
Match: LOXA_PHAVU (Lipoxygenase 1 OS=Phaseolus vulgaris GN=LOXA PE=3 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 1.804e-41 Identity = 71/125 (56.80%), Postives = 89/125 (71.20%), Query Frame = 3 Query: 9 RGLAVEDPSAPHGLKPTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVQSDEQLQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHATVNFGQYTYRGYFPNRPTTAR 383 RG+AVEDPS+P+GL+ +EDYP+A DGL++WD I+ WV DYV+ YYP V+ D +LQAWW E GHGD K +PWWP L TP+DLI + I+W+ S HA VNFGQY Y G+ NRPT R Sbjct: 611 RGMAVEDPSSPYGLRLVVEDYPYAVDGLEIWDTIQTWVKDYVSLYYPTNDAVKKDTELQAWWKEAVEKGHGDLKDKPWWPKLNTPQDLIHTCSIIIWIASALHAAVNFGQYPYGGFILNRPTITR 735
BLAST of CX305572 vs. ExPASy Swiss-Prot
Match: LOX22_HORVU (Lipoxygenase 2.2, chloroplastic OS=Hordeum vulgare GN=LOX2.2 PE=1 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 3.078e-41 Identity = 76/140 (54.29%), Postives = 94/140 (67.14%), Query Frame = 3 Query: 9 RGLAVEDPSAPHGLKPTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVQSDEQLQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHATVNFGQYTYRGYFPNRPTTARCNIATENPSDEQWKF 428 RG+AV L+ IEDYP+ANDGL +WDAIKQW +DYV HYYP + DE+LQ WWTE+RT GH DK+ EPWWP L + L++++ TI+WVTS HHA VNFGQY GY PN P+ AR N+ E +E F Sbjct: 678 RGMAVRGEDGK--LELAIEDYPYANDGLLVWDAIKQWASDYVAHYYPCAVDIVDDEELQDWWTEVRTKGHPDKQDEPWWPELDCHESLVQVLATIMWVTSAHHAAVNFGQYPMAGYVPNHPSIARRNMPCEMGPEEMLAF 815
BLAST of CX305572 vs. ExPASy Swiss-Prot
Match: LOX3_ARATH (Lipoxygenase 3, chloroplastic OS=Arabidopsis thaliana GN=LOX3 PE=2 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 4.020e-41 Identity = 74/146 (50.68%), Postives = 98/146 (67.12%), Query Frame = 3 Query: 9 RGLAVEDPSAPHGLKPTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVQSDEQLQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHATVNFGQYTYRGYFPNRPTTARCNIATENPSDEQWKFFLEKPE 446 RG+A+ D + PHGLK IEDYP+ANDGL LW AI+ WV YV YYP+ +L+++D +LQ+W++E VGH D + WWP L T DL+ I+TT++W+ S HA +NFGQY Y GY PNRP R I E SD ++ F+ PE Sbjct: 668 RGMAIPDATQPHGLKLLIEDYPYANDGLLLWSAIQTWVRTYVERYYPNPNLIKTDSELQSWYSESINVGHADLRDADWWPELSTVDDLVSILTTLIWLASAQHAALNFGQYPYGGYVPNRPPLMRRLIPDE--SDPEYASFISHPE 811
BLAST of CX305572 vs. ExPASy Swiss-Prot
Match: LOX6_ARATH (Lipoxygenase 6, choloroplastic OS=Arabidopsis thaliana GN=LOX6 PE=1 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 5.250e-41 Identity = 75/150 (50.00%), Postives = 99/150 (66.00%), Query Frame = 3 Query: 9 RGLAVEDPSAPHGLKPTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVQSDEQLQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHATVNFGQYTYRGYFPNRPTTARCNIATENPSDEQWKFFLEKPENALL 458 RG+A ED SA G++ I+DYP+A DGL +W AIK V YV H+Y D + SD +LQAWW EI+ GH DKK EPWWP L T +DL +I+T ++W+ SG HA +NFGQY + GY PNRPT R I E +D ++ F+ P+ + L Sbjct: 665 RGMAEEDSSAECGVRLVIDDYPYAADGLLIWKAIKDLVESYVKHFYSDSKSITSDLELQAWWDEIKNKGHYDKKDEPWWPKLNTTQDLSQILTNMIWIASGQHAAINFGQYPFGGYVPNRPTLLRKLIPQE--TDPDYEMFMRNPQYSFL 812
BLAST of CX305572 vs. ExPASy Swiss-Prot
Match: LOX3_PEA (Seed lipoxygenase-3 OS=Pisum sativum GN=LOX1.3 PE=2 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 6.857e-41 Identity = 75/150 (50.00%), Postives = 103/150 (68.67%), Query Frame = 3 Query: 9 RGLAVEDPSAPHGLKPTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVQSDEQLQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHATVNFGQYTYRGYFPNRPTTARCNIATENPSDEQWKFFLEKPENALL 458 RG+A+EDPS+P G+K +EDYP+A DGL++W IK WV DYV+ YY ++ D +LQAWW E+ VGHGDKK+EPWWP ++T +DLIE+ + ++W S HA VNFGQY+Y G NRPT +R E S E ++ ++ P+ A L Sbjct: 611 RGMAIEDPSSPCGVKLVVEDYPYAVDGLEIWAIIKTWVQDYVSLYYTSDEKLRQDSELQAWWKELVEVGHGDKKNEPWWPKMQTREDLIEVCSIVIWTASALHAAVNFGQYSYGGLILNRPTLSR-RFMPEKGSAE-FEELVKSPQKAYL 758
BLAST of CX305572 vs. ExPASy Swiss-Prot
Match: LOX2_ORYSJ (Lipoxygenase 2 OS=Oryza sativa subsp. japonica GN=LOX1.1 PE=2 SV=2) HSP 1 Score: 165.236 bits (417), Expect = 1.170e-40 Identity = 68/125 (54.40%), Postives = 92/125 (73.60%), Query Frame = 3 Query: 9 RGLAVEDPSAPHGLKPTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVQSDEQLQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHATVNFGQYTYRGYFPNRPTTAR 383 RG+AV DP++P+ ++ IEDYP+ANDGL +W AI+QW T+Y+ YYP+ ++Q D +LQAWW E+R VGHGD K WWP +KT +L++ TI+W+ S HA VNFGQY Y GY PNRP+ +R Sbjct: 614 RGVAVPDPASPYKVRLLIEDYPYANDGLAVWHAIEQWATEYLAIYYPNDGVLQGDAELQAWWKEVREVGHGDIKDATWWPEMKTVAELVKACATIIWIGSALHAAVNFGQYPYAGYLPNRPSVSR 738
BLAST of CX305572 vs. ExPASy Swiss-Prot
Match: LOX1_ORYSJ (Lipoxygenase 1 OS=Oryza sativa subsp. japonica GN=Os03g0699700 PE=2 SV=2) HSP 1 Score: 164.851 bits (416), Expect = 1.528e-40 Identity = 72/146 (49.32%), Postives = 99/146 (67.81%), Query Frame = 3 Query: 9 RGLAVEDPSAPHGLKPTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVQSDEQLQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHATVNFGQYTYRGYFPNRPTTARCNIATENPSDEQWKFFLEKPE 446 RG+A++DPS+P +K I+DYP+A DGL +W AI+QWVT+Y YYP+ ++Q D +LQAWW E+R VGHGD K WWP +++ +L + TTI+W+ S HA VNFGQY Y GY PNRPT +R + P +++ E PE Sbjct: 607 RGIAIKDPSSPSKVKLLIKDYPYATDGLAIWQAIEQWVTEYCAIYYPNDGVLQGDVELQAWWKEVREVGHGDLKDADWWPKMQSLPELTKACTTIIWIASALHAAVNFGQYPYAGYLPNRPTISRRPM--PEPGSKEYTELDENPE 750 The following BLAST results are available for this feature:
BLAST of CX305572 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 45
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Sequences
The
following sequences are available for this feature:
EST sequence >CX305572 ID=CX305572; Name=CX305572; organism=Citrus clementina; type=EST; length=463bpback to top |