CX305572
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX305572 vs. ExPASy Swiss-Prot
Match: LOXB_SOLLC (Lipoxygenase B OS=Solanum lycopersicum GN=LOX1.2 PE=2 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 3.403e-40 Identity = 73/150 (48.67%), Postives = 99/150 (66.00%), Query Frame = 3 Query: 9 RGLAVEDPSAPHGLKPTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVQSDEQLQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHATVNFGQYTYRGYFPNRPTTARCNIATENPSDEQWKFFLEKPENALL 458 RG+AVED S+PHG++ I DYP+A DGL++W AIK WVT+Y YY V+ D +LQAWW E+R GHGDKK E WWP L+T ++L + T I+W+ S HA ++FG Y+Y GY PNRPT + CN+ E P +++ P+ L Sbjct: 609 RGVAVEDLSSPHGIRLLILDYPYAVDGLEIWAAIKSWVTEYCKFYYKSDETVEKDTELQAWWKELREEGHGDKKDEAWWPKLQTRQELRDCCTIIIWIASALHAALHFGLYSYAGYLPNRPTLS-CNLMPE-PGSVEYEELKTNPDKVFL 756
BLAST of CX305572 vs. ExPASy Swiss-Prot
Match: LOX4_SOYBN (Lipoxygenase-4 OS=Glycine max GN=LOX1.5 PE=1 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 5.805e-40 Identity = 68/125 (54.40%), Postives = 91/125 (72.80%), Query Frame = 3 Query: 9 RGLAVEDPSAPHGLKPTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVQSDEQLQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHATVNFGQYTYRGYFPNRPTTAR 383 RG+AV+DPSAPHG++ IEDYP+A+DGL++WDAIK WV +YV+ YY +Q D +LQAWW E+ VGHGD K +PWW ++T ++L+E ++W+ S HA VNFGQY Y G NRPT +R Sbjct: 602 RGVAVKDPSAPHGVRLLIEDYPYASDGLEIWDAIKSWVQEYVSFYYKSDEELQKDPELQAWWKELVEVGHGDLKDKPWWQKMQTREELVEASAILIWIASALHAAVNFGQYPYGGLILNRPTISR 726
BLAST of CX305572 vs. ExPASy Swiss-Prot
Match: LOX1_HORVU (Lipoxygenase 1 OS=Hordeum vulgare GN=LOX1.1 PE=1 SV=2) HSP 1 Score: 162.54 bits (410), Expect = 7.581e-40 Identity = 70/151 (46.36%), Postives = 102/151 (67.55%), Query Frame = 3 Query: 9 RGLAVEDPSAPHGLKPTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVQSDEQLQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHATVNFGQYTYRGYFPNRPTTARCNIATENPSDEQWKFFLEKPENALLN 461 RG+AVEDPS+P+ ++ + DYP+A DGL +W AI+Q+V++Y+ YYP+ ++Q D ++QAWW E R VGHGD K PWWP +++ +L + TTI+W+ S HA VNFGQY Y G+ PNRPT +R + P E++ PE A ++ Sbjct: 606 RGMAVEDPSSPYKVRLLVSDYPYAADGLAIWHAIEQYVSEYLAIYYPNDGVLQGDTEVQAWWKETREVGHGDLKDAPWWPKMQSVPELAKACTTIIWIGSALHAAVNFGQYPYAGFLPNRPTVSRRRM--PEPGTEEYAELERDPERAFIH 754
BLAST of CX305572 vs. ExPASy Swiss-Prot
Match: LOX3_SOYBN (Seed lipoxygenase-3 OS=Glycine max GN=LOX1.3 PE=1 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 1.689e-39 Identity = 69/125 (55.20%), Postives = 89/125 (71.20%), Query Frame = 3 Query: 9 RGLAVEDPSAPHGLKPTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVQSDEQLQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHATVNFGQYTYRGYFPNRPTTAR 383 RG+A+EDPS PHG++ IEDYP+A DGL++WDAIK WV +YV YY ++ D +LQA W E+ VGHGDKK+EPWWP ++T ++L+E I+W S HA VNFGQY Y G NRPT +R Sbjct: 607 RGMAIEDPSCPHGIRLVIEDYPYAVDGLEIWDAIKTWVHEYVFLYYKSDDTLREDPELQACWKELVEVGHGDKKNEPWWPKMQTREELVEACAIIIWTASALHAAVNFGQYPYGGLILNRPTLSR 731
BLAST of CX305572 vs. ExPASy Swiss-Prot
Match: LOX2_SOYBN (Seed lipoxygenase-2 OS=Glycine max GN=LOX1.2 PE=2 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 2.881e-39 Identity = 70/125 (56.00%), Postives = 90/125 (72.00%), Query Frame = 3 Query: 9 RGLAVEDPSAPHGLKPTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVQSDEQLQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHATVNFGQYTYRGYFPNRPTTAR 383 RG+A++DPSAPHGL+ IEDYP+A DGL++W AIK WV +YV+ YY V+ D +LQ WW E GHGD K +PWWP L+T ++L+EI T I+W S HA VNFGQY Y G+ NRPT++R Sbjct: 616 RGVAIKDPSAPHGLRLLIEDYPYAVDGLEIWAAIKTWVQEYVSLYYARDDDVKPDSELQQWWKEAVEKGHGDLKDKPWWPKLQTIEELVEICTIIIWTASALHAAVNFGQYPYGGFILNRPTSSR 740
BLAST of CX305572 vs. ExPASy Swiss-Prot
Match: LOX5_ORYSJ (Putative lipoxygenase 5 OS=Oryza sativa subsp. japonica GN=Os04g0447100 PE=3 SV=2) HSP 1 Score: 159.844 bits (403), Expect = 4.914e-39 Identity = 74/151 (49.01%), Postives = 93/151 (61.59%), Query Frame = 3 Query: 9 RGLAVEDPSAPHGLKPTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVQSDEQLQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHATVNFGQYTYRGYFPNRPTTARCNIATENPSDEQWKFFLEKPENALLN 461 RG+AVEDPS PHGL+ IEDYP+A DGL LW AI +W YV YYP VQ+D +LQ+W+ E GH DK+ PWWP L TP DL ++TT+VW+ S HA +NFGQY GY PNRP R + E D ++ + P L+ Sbjct: 649 RGMAVEDPSQPHGLRLLIEDYPYAADGLLLWSAISRWCEAYVAAYYPSDEAVQADYELQSWYAEAVQSGHADKRGAPWWPRLSTPGDLASLLTTLVWLCSAQHAALNFGQYPLGGYIPNRPPLMRRLVPAE--GDPEYAHLVADPHRFFLS 797
BLAST of CX305572 vs. ExPASy Swiss-Prot
Match: LOX3_ORYSJ (Putative lipoxygenase 3 OS=Oryza sativa subsp. japonica GN=Os03g0700400 PE=3 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 1.867e-38 Identity = 70/150 (46.67%), Postives = 97/150 (64.67%), Query Frame = 3 Query: 9 RGLAVEDPSAPHGLKPTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVQSDEQLQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHATVNFGQYTYRGYFPNRPTTARCNIATENPSDEQWKFFLEKPENALL 458 RG+AVED ++P+ ++ I+DYP+A DGL++W AI+QWV +Y+ YY D +++ D +LQAWW E+R VGHGD K WWP + +L + TTI+W+ S HA VNFGQY Y GY PNRPT +R + P E + PE A + Sbjct: 610 RGVAVEDATSPYKVRLLIKDYPYAADGLEIWHAIEQWVGEYLAIYYTDDGVLRGDAELQAWWAEVREVGHGDLKGAAWWPRMDAVSELRDACTTIIWIASALHAAVNFGQYPYAGYLPNRPTVSRRRM--PEPGTEAYGELGRDPERAFI 757
BLAST of CX305572 vs. ExPASy Swiss-Prot
Match: LOX4_ORYSJ (Probable lipoxygenase 4 OS=Oryza sativa subsp. japonica GN=Os03g0700700 PE=2 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 5.433e-38 Identity = 64/125 (51.20%), Postives = 91/125 (72.80%), Query Frame = 3 Query: 9 RGLAVEDPSAPHGLKPTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVQSDEQLQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHATVNFGQYTYRGYFPNRPTTAR 383 RG+AV DP++P+ ++ I+DYP+A DGL +W AI++WV +Y+ YYP+ +++ DE+LQAWW E+R VGHGD K + WWP + T ++L T I+W+ S HA VNFGQY Y G+ PNRPT +R Sbjct: 617 RGVAVPDPTSPYNVRLLIKDYPYAVDGLVIWWAIERWVGEYLAIYYPNDGVLRGDEELQAWWKEVREVGHGDLKDQDWWPKMDTVQELTRACTIIIWIASALHAAVNFGQYPYAGFLPNRPTVSR 741
BLAST of CX305572 vs. ExPASy Swiss-Prot
Match: LOX1_SOYBN (Seed lipoxygenase-1 OS=Glycine max GN=LOX1.1 PE=1 SV=2) HSP 1 Score: 155.992 bits (393), Expect = 7.096e-38 Identity = 67/125 (53.60%), Postives = 87/125 (69.60%), Query Frame = 3 Query: 9 RGLAVEDPSAPHGLKPTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVQSDEQLQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHATVNFGQYTYRGYFPNRPTTAR 383 RG+A++DPS PHG++ IEDYP+A DGL++W AIK WV +YV YY V++D +LQ WW E GHGD K +PWWP L+T +DL+E+ I+W+ S HA VNFGQY Y G NRPT +R Sbjct: 588 RGVAIKDPSTPHGVRLLIEDYPYAADGLEIWAAIKTWVQEYVPLYYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPWWPKLQTLEDLVEVCLIIIWIASALHAAVNFGQYPYGGLIMNRPTASR 712
BLAST of CX305572 vs. ExPASy Swiss-Prot
Match: LOX1_LENCU (Lipoxygenase OS=Lens culinaris GN=LOX1.1 PE=2 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 1.210e-37 Identity = 66/125 (52.80%), Postives = 89/125 (71.20%), Query Frame = 3 Query: 9 RGLAVEDPSAPHGLKPTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVQSDEQLQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHATVNFGQYTYRGYFPNRPTTAR 383 RG+AV+DPS+PHG++ IEDYP+A+DGL++W AIK WV +YVN YY + + D +LQA+W E+ VGHGD K WW ++ K+LIE + ++W+ S HA VNFGQY Y GY NRPT +R Sbjct: 615 RGVAVKDPSSPHGVRLLIEDYPYASDGLEIWAAIKSWVEEYVNFYYKSDAAIAQDAELQAFWKELVEVGHGDLKSATWWFKMQNRKELIEACSILIWIASALHAAVNFGQYPYGGYILNRPTKSR 739 The following BLAST results are available for this feature:
BLAST of CX305572 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 45
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Sequences
The
following sequences are available for this feature:
EST sequence >CX305572 ID=CX305572; Name=CX305572; organism=Citrus clementina; type=EST; length=463bpback to top |