CX305587

Overview
NameCX305587
Unique NameCX305587
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length452
Libraries
Library NameType
Drought1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig418 contig Ccv1_Contig418:1..434. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX305587 vs. ExPASy Swiss-Prot
Match: DNAJ_ANATD (Chaperone protein dnaJ OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 4.163e-11
Identity = 34/64 (53.12%), Postives = 45/64 (70.31%), Query Frame = 3
Query:  255 YEILGIQAGATCQEIKTAYRKLARVLHPDVAAKSQNENSAYKFMKLHEAYETLSDPKKRADYDR 446
            YEILG+   AT +EIK AYR+LA+  HPD  A   N+ +  KF +++EAYE LSDP+KR  YD+
Sbjct:    8 YEILGVPRNATEEEIKRAYRRLAKQYHPD--ANPGNKEAEEKFKEINEAYEVLSDPEKRKLYDQ 69          
BLAST of CX305587 vs. ExPASy Swiss-Prot
Match: DNAJ_THEEB (Chaperone protein dnaJ OS=Thermosynechococcus elongatus (strain BP-1) GN=dnaJ PE=3 SV=2)

HSP 1 Score: 66.6254 bits (161), Expect = 5.437e-11
Identity = 32/64 (50.00%), Postives = 44/64 (68.75%), Query Frame = 3
Query:  255 YEILGIQAGATCQEIKTAYRKLARVLHPDVAAKSQNENSAYKFMKLHEAYETLSDPKKRADYDR 446
            YEILG+   A  +E+K AYR+LAR  HPDV   ++   +  KF +++ AYE LSDP+ RA+YDR
Sbjct:    6 YEILGVSRSADAEELKRAYRRLARKYHPDV---NKEPGAEEKFKEINRAYEVLSDPQARANYDR 66          
BLAST of CX305587 vs. ExPASy Swiss-Prot
Match: DNAJ_SINMW (Chaperone protein dnaJ OS=Sinorhizobium medicae (strain WSM419) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 5.437e-11
Identity = 35/66 (53.03%), Postives = 47/66 (71.21%), Query Frame = 3
Query:  252 LYEILGIQAGATCQEIKTAYRKLARVLHPDVAAKSQNENSAYK-FMKLHEAYETLSDPKKRADYDR 446
            LYE LG+Q  A  +E+K+A+RKLA   HPD   ++  +N A K F +++EAYETL DP+KRA YDR
Sbjct:    5 LYETLGVQKSADEKELKSAFRKLAMKYHPD---RNPGDNEAEKSFKEINEAYETLKDPQKRAAYDR 67          
BLAST of CX305587 vs. ExPASy Swiss-Prot
Match: DNAJ_OCEIH (Chaperone protein dnaJ OS=Oceanobacillus iheyensis GN=dnaJ PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 5.437e-11
Identity = 36/69 (52.17%), Postives = 45/69 (65.22%), Query Frame = 3
Query:  240 GPGSLYEILGIQAGATCQEIKTAYRKLARVLHPDVAAKSQNENSAYKFMKLHEAYETLSDPKKRADYDR 446
            G    YEILGI   A+  EIK  YRKLAR  HPDV   ++  ++A KF ++ EAYE LSD +KRA YD+
Sbjct:    2 GKRDYYEILGIDKSASQDEIKKNYRKLARKYHPDV---NKEADAAEKFKEVKEAYEVLSDDQKRAQYDQ 67          
BLAST of CX305587 vs. ExPASy Swiss-Prot
Match: DNAJ_LISMF (Chaperone protein dnaJ OS=Listeria monocytogenes serotype 4b (strain F2365) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 5.437e-11
Identity = 31/64 (48.44%), Postives = 44/64 (68.75%), Query Frame = 3
Query:  255 YEILGIQAGATCQEIKTAYRKLARVLHPDVAAKSQNENSAYKFMKLHEAYETLSDPKKRADYDR 446
            YE+LG+   A+  EIK AYRKL++  HPD+   ++   +  KF ++ EAYE LSDP+KRA YD+
Sbjct:    7 YEVLGVSKSASADEIKKAYRKLSKQYHPDI---NKEAGADEKFKEISEAYEALSDPQKRAQYDQ 67          
BLAST of CX305587 vs. ExPASy Swiss-Prot
Match: DNAJ_LISMC (Chaperone protein dnaJ OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 5.437e-11
Identity = 31/64 (48.44%), Postives = 44/64 (68.75%), Query Frame = 3
Query:  255 YEILGIQAGATCQEIKTAYRKLARVLHPDVAAKSQNENSAYKFMKLHEAYETLSDPKKRADYDR 446
            YE+LG+   A+  EIK AYRKL++  HPD+   ++   +  KF ++ EAYE LSDP+KRA YD+
Sbjct:    7 YEVLGVSKSASADEIKKAYRKLSKQYHPDI---NKEAGADEKFKEISEAYEALSDPQKRAQYDQ 67          
BLAST of CX305587 vs. ExPASy Swiss-Prot
Match: DNAJ_LACF3 (Chaperone protein dnaJ OS=Lactobacillus fermentum (strain IFO 3956 / LMG 18251) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 5.437e-11
Identity = 34/65 (52.31%), Postives = 45/65 (69.23%), Query Frame = 3
Query:  252 LYEILGIQAGATCQEIKTAYRKLARVLHPDVAAKSQNENSAYKFMKLHEAYETLSDPKKRADYDR 446
            LY++LG++  A+  EIK AYRKLA   HPDV   +    +  KF K++EAYETLSD +KRA YD+
Sbjct:    6 LYDVLGVKKDASEAEIKRAYRKLAAKYHPDV---NHEPGAEKKFKKINEAYETLSDDQKRAQYDQ 67          
BLAST of CX305587 vs. ExPASy Swiss-Prot
Match: DNAJ_GEOTN (Chaperone protein dnaJ OS=Geobacillus thermodenitrificans (strain NG80-2) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 5.437e-11
Identity = 33/64 (51.56%), Postives = 45/64 (70.31%), Query Frame = 3
Query:  255 YEILGIQAGATCQEIKTAYRKLARVLHPDVAAKSQNENSAYKFMKLHEAYETLSDPKKRADYDR 446
            YE+LG+   AT  EIK AYRKL++  HPD+   ++  ++A KF ++ EAYE LSD +KRA YDR
Sbjct:    7 YEVLGVSKNATKDEIKKAYRKLSKQYHPDI---NKAPDAAEKFKEIKEAYEVLSDDEKRARYDR 67          
BLAST of CX305587 vs. ExPASy Swiss-Prot
Match: DNAJ_BACHD (Chaperone protein dnaJ OS=Bacillus halodurans GN=dnaJ PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 5.437e-11
Identity = 32/64 (50.00%), Postives = 44/64 (68.75%), Query Frame = 3
Query:  255 YEILGIQAGATCQEIKTAYRKLARVLHPDVAAKSQNENSAYKFMKLHEAYETLSDPKKRADYDR 446
            YE+LG+   A+  E+K AYRKLAR  HPDV      E+   KF ++ EA++TLSDP+K+A YD+
Sbjct:    7 YEVLGVDRNASADEVKKAYRKLARKYHPDVNKAPDAED---KFKEVKEAFDTLSDPQKKAHYDQ 67          
BLAST of CX305587 vs. ExPASy Swiss-Prot
Match: DNJB5_MOUSE (DnaJ homolog subfamily B member 5 OS=Mus musculus GN=Dnajb5 PE=2 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 7.102e-11
Identity = 34/64 (53.12%), Postives = 45/64 (70.31%), Query Frame = 3
Query:  255 YEILGIQAGATCQEIKTAYRKLARVLHPDVAAKSQNENSAYKFMKLHEAYETLSDPKKRADYDR 446
            Y+ILGI +GA   EIK AYRK+A   HPD   K++  N+  KF ++ EAY+ LSDPKKR+ YD+
Sbjct:    6 YKILGIPSGANEDEIKKAYRKMALKYHPD---KNKEPNAEEKFKEIAEAYDVLSDPKKRSLYDQ 66          
The following BLAST results are available for this feature:
BLAST of CX305587 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
DNAJ_ANATD4.163e-1153.13Chaperone protein dnaJ OS=Anaerocellum thermophilu... [more]
DNAJ_THEEB5.437e-1150.00Chaperone protein dnaJ OS=Thermosynechococcus elon... [more]
DNAJ_SINMW5.437e-1153.03Chaperone protein dnaJ OS=Sinorhizobium medicae (s... [more]
DNAJ_OCEIH5.437e-1152.17Chaperone protein dnaJ OS=Oceanobacillus iheyensis... [more]
DNAJ_LISMF5.437e-1148.44Chaperone protein dnaJ OS=Listeria monocytogenes s... [more]
DNAJ_LISMC5.437e-1148.44Chaperone protein dnaJ OS=Listeria monocytogenes s... [more]
DNAJ_LACF35.437e-1152.31Chaperone protein dnaJ OS=Lactobacillus fermentum ... [more]
DNAJ_GEOTN5.437e-1151.56Chaperone protein dnaJ OS=Geobacillus thermodenitr... [more]
DNAJ_BACHD5.437e-1150.00Chaperone protein dnaJ OS=Bacillus halodurans GN=d... [more]
DNJB5_MOUSE7.102e-1153.13DnaJ homolog subfamily B member 5 OS=Mus musculus ... [more]

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Properties
Property NameValue
Genbank descriptionC18007E11Rv Drought1 Citrus clementina cDNA clone C18007E11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX305587 ID=CX305587; Name=CX305587; organism=Citrus clementina; type=EST; length=452bp
GCGGGGGATACTACTCTCATCTTCAAAACAAAACACAAGAAGTAATCTAA
TCATCGATTCAATCCATCATGTCTACTCTTGCATCTTCAGCCCATCTGAT
TGGCCCGGGATTTATCACCAACGAGACTCATTCACAATCACAGCCCACGT
CTGTCAAATTCCGCCCACTTCGCGTATCGGCATCGGCTTGCGCCTCAACG
GCGGAGAGAACAAGAACCCATCATCACATTACTTCTCCTGGACCCGGCTC
ACTCTACGAAATCCTGGGGATTCAGGCGGGCGCCACATGTCAGGAAATCA
AGACTGCTTATCGGAAATTAGCAAGAGTTTTGCACCCGGATGTTGCCGCT
AAGAGTCAAAATGAGAATTCAGCATATAAGTTCATGAAATTACACGAAGC
TTACGAAACTCTATCTGACCCCAAGAAGCGTGCGGACTACGATCGTACCC
TT
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