CX305786
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX305786 vs. ExPASy Swiss-Prot
Match: CHID_SOLLC (Basic endochitinase (Fragment) OS=Solanum lycopersicum GN=CHI14 PE=2 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 4.684e-29 Identity = 57/105 (54.29%), Postives = 73/105 (69.52%), Query Frame = -3 Query: 9 LGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYC--DPNYPC 317 + +IS+ +FE +L +RND+ C A+ FYTY+AFI A K F AFG +G+ R +EIAAF AQT HETTGGW AP G Y+WGYC+NRE G + DYC +PC Sbjct: 5 ISSLISKNLFERILVHRNDRACGAKGFYTYEAFITATKTFAAFGTTGDTNTRNKEIAAFLAQTSHETTGGWATAPDGPYSWGYCYNREQG-SPGDYCASSQQWPC 108
BLAST of CX305786 vs. ExPASy Swiss-Prot
Match: CHIB_POPTR (Acidic endochitinase WIN6.2B OS=Populus trichocarpa PE=2 SV=2) HSP 1 Score: 125.176 bits (313), Expect = 1.044e-28 Identity = 59/101 (58.42%), Postives = 68/101 (67.33%), Query Frame = -3 Query: 33 GDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYC-FNREVGAASSD 332 G G L II MF+D+L+YRND +CPA FYTY+AFI AAK FP FGN+G++ MRKREIAAF QT HET G WP A G +Y WGYC N G D Sbjct: 80 GGDGYLSDIIPESMFDDMLKYRNDPQCPAVGFYTYNAFISAAKEFPDFGNTGDDLMRKREIAAFLGQTSHETNGWWPAAQGDQYDWGYCHMNYNYGLCGDD 180
BLAST of CX305786 vs. ExPASy Swiss-Prot
Match: CHI11_ORYSJ (Chitinase 11 OS=Oryza sativa subsp. japonica GN=Cht11 PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 1.666e-26 Identity = 58/110 (52.73%), Postives = 71/110 (64.55%), Query Frame = -3 Query: 3 GDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPNYPCRG 332 G +G II+R MFE +L +R D+ C FYTYDAFI+AA FP FG +GN+ R+RE+AAFF QT HETTGGW AP G +AWGYC E+ + DP Y RG Sbjct: 22 GQQAGVGSIITRAMFESMLSHRGDQGCQG-AFYTYDAFIKAAGDFPRFGTTGNDETRRRELAAFFGQTSHETTGGWATAPDGPFAWGYCRVNEITPS-----DPPYYGRG 125
BLAST of CX305786 vs. ExPASy Swiss-Prot
Match: CHIB_SOLLC (Acidic 27 kDa endochitinase OS=Solanum lycopersicum GN=CHI17 PE=1 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 1.194e-24 Identity = 53/97 (54.64%), Postives = 69/97 (71.13%), Query Frame = -3 Query: 30 ELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDY 320 ++G I++ +F ++L+ RND RCPA+ FYTYDAFI AA +FP FG +G++T RK+EIAAFF QT HETTGG A G +A GYCF RE S + Sbjct: 18 DVGTIVTSDLFNEMLKNRNDDRCPAKGFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETTGGSLSA-DGPFAGGYCFVREGNQMGSGF 113
BLAST of CX305786 vs. ExPASy Swiss-Prot
Match: CHI10_ORYSJ (Chitinase 10 OS=Oryza sativa subsp. japonica GN=Cht10 PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 2.660e-24 Identity = 50/105 (47.62%), Postives = 65/105 (61.90%), Query Frame = -3 Query: 9 LGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASS--DYCDPNYPC 317 + I+S +++ L +++D CPAR FYTY +F+ AA FP F +G RKRE+AAF AQ HETTGGW AP G YAWG C+ E+ SS D D +PC Sbjct: 49 VSSIVSEQLYASLFLHKDDAACPARGFYTYASFVRAATRFPRFAATGCADARKREVAAFLAQISHETTGGWATAPDGPYAWGLCYKEEINPQSSYCDATDKQWPC 153
BLAST of CX305786 vs. ExPASy Swiss-Prot
Match: CHIT_PETHY (Acidic endochitinase OS=Petunia hybrida PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 7.739e-24 Identity = 53/96 (55.21%), Postives = 67/96 (69.79%), Query Frame = -3 Query: 30 LGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDY 317 +G I++ +F+ +L+ RND RC A FYTYDAFI AA +FP FG +G++T RK+EIAAFF QT HETTGG +P G YA GYCF RE + Y Sbjct: 26 VGSIVTSDLFDQMLKNRNDARCFAVRFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETTGG-TLSPDGPYAGGYCFLREGNQMGNGY 120
BLAST of CX305786 vs. ExPASy Swiss-Prot
Match: CHIA_SOLCI (Acidic endochitinase pcht28 OS=Solanum chilense PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 1.011e-23 Identity = 49/95 (51.58%), Postives = 66/95 (69.47%), Query Frame = -3 Query: 30 GKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDY 314 G I++R++FE +L +RN+ CPA+ FYTYDAFI AA +FP FG +G++T RK+EIAAFF QT HET GG G + GYCF R++ + Y Sbjct: 28 GSIVTRELFEQMLSFRNNDACPAKGFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETKGG----SAGTFTGGYCFVRQIDQSDRYY 118
BLAST of CX305786 vs. ExPASy Swiss-Prot
Match: CHIA_SOLLC (Acidic 26 kDa endochitinase OS=Solanum lycopersicum GN=CHI3 PE=1 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 2.252e-23 Identity = 48/95 (50.53%), Postives = 66/95 (69.47%), Query Frame = -3 Query: 30 GKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDY 314 G I++R++FE +L +RN+ CPA+ FYTYDAFI AA +FP FG +G++T RK+EIAAFF QT HET GG G + GYCF +++ + Y Sbjct: 28 GSIVTRELFEQMLSFRNNDACPAKGFYTYDAFIAAANSFPGFGTAGDDTARKKEIAAFFGQTSHETNGG----SAGTFTGGYCFVKQIEQSDRYY 118
BLAST of CX305786 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSJ (Chitinase 7 OS=Oryza sativa subsp. japonica GN=Cht7 PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 6.552e-23 Identity = 54/110 (49.09%), Postives = 71/110 (64.55%), Query Frame = -3 Query: 9 GGELG--KIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPC 326 GG G +++ FE +L +R+D CPAR FY Y AF+ AA AFPAF +G+ RKRE+AAF AQT H T+ GG Y+WGYC+ +EV A+SD+C PN +PC Sbjct: 92 GGRAGVASVVTSDQFERMLPHRDDAACPARGFYAYRAFVAAAGAFPAFAATGDADTRKREVAAFLAQTSHATS-------GGPYSWGYCY-KEVKGATSDFCVPNARWPC 193
BLAST of CX305786 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSI (Chitinase 7 OS=Oryza sativa subsp. indica GN=Cht7 PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 6.552e-23 Identity = 54/110 (49.09%), Postives = 71/110 (64.55%), Query Frame = -3 Query: 9 GGELG--KIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPC 326 GG G +++ FE +L +R+D CPAR FY Y AF+ AA AFPAF +G+ RKRE+AAF AQT H T+ GG Y+WGYC+ +EV A+SD+C PN +PC Sbjct: 92 GGRAGVASVVTSDQFERMLPHRDDAACPARGFYAYRAFVAAAGAFPAFAATGDADTRKREVAAFLAQTSHATS-------GGPYSWGYCY-KEVKGATSDFCVPNARWPC 193 The following BLAST results are available for this feature:
BLAST of CX305786 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 48
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Sequences
The
following sequences are available for this feature:
EST sequence >CX305786 ID=CX305786; Name=CX305786; organism=Citrus clementina; type=EST; length=334bpback to top |