CX306023
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX306023 vs. ExPASy Swiss-Prot
Match: CHI3_TOBAC (Endochitinase 3 OS=Nicotiana tabacum GN=CHN14 PE=3 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 3.524e-49 Identity = 96/163 (58.90%), Postives = 111/163 (68.10%), Query Frame = 3 Query: 3 CPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGVASSDYC--DPNYPCR--GKCYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWSWMTAQPPKPSCHEVIIDEWKPPAND 479 C + FYTY+AFI AA++F FG +G+ T RKRE+AAFFAQT HETTGGW AP G YAWGYC+ RE G S YC +PC K YGRGPIQ+S+NYNY C NNPDL+AT+ V+SFKSAIW WMTAQ PKPSCH+VI W P A D Sbjct: 106 CQGKSFYTYNAFITAARSFRGFGTTGDTTRRKREVAAFFAQTSHETTGGWDTAPDGRYAWGYCYLREQGNPPS-YCVQSSQWPCAPGQKYYGRGPIQISYNYNYGPC--GRAIGQNLLNNPDLVATNAVVSFKSAIWFWMTAQSPKPSCHDVITGRWTPSAAD 265
BLAST of CX306023 vs. ExPASy Swiss-Prot
Match: CHIA_SECCE (Basic endochitinase A OS=Secale cereale GN=rsca PE=1 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 5.088e-48 Identity = 95/163 (58.28%), Postives = 111/163 (68.10%), Query Frame = 3 Query: 3 CPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGVASSDYCDPN--YPCR-GKC-YGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWSWMTAQPPKPSCHEVIIDEWKPPAND 479 C A+ FYTYDAF+ AA AFP FG +G+ RKRE+AAF AQT HETTGGW AP G +AWGYCF +E G A+S+YC P+ +PC GK YGRGPIQLS NYNY NPDL+ATDP +SFK+A+W WMTAQ PKPS H VI +W P D Sbjct: 101 CQAKGFYTYDAFVAAAGAFPGFGTTGSTDTRKREVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERG-ATSNYCTPSAQWPCAPGKSYYGRGPIQLSHNYNY--GPAGRAIGVDLLRNPDLVATDPTVSFKTAMWFWMTAQAPKPSSHAVITGQWSPSGTD 260
BLAST of CX306023 vs. ExPASy Swiss-Prot
Match: CHI2_HORVU (26 kDa endochitinase 2 OS=Hordeum vulgare PE=1 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 6.645e-48 Identity = 94/163 (57.67%), Postives = 109/163 (66.87%), Query Frame = 3 Query: 3 CPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGVASSDYCDPN--YPCR--GKCYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWSWMTAQPPKPSCHEVIIDEWKPPAND 479 C A+ FYTYDAF+ AA AFP FG +G+ +KRE+AAF AQT HETTGGW AP G +AWGYCF +E G ASSDYC P+ +PC + YGRGPIQLS NYNY NPDL+ATD + FK+AIW WMTAQPPKPS H VI +W P D Sbjct: 46 CQAKGFYTYDAFVAAAAAFPGFGTTGSADAQKREVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERG-ASSDYCTPSAQWPCAPGKRYYGRGPIQLSHNYNY--GPAGRAIGVDLLANPDLVATDATVGFKTAIWFWMTAQPPKPSSHAVIAGQWSPSGAD 205
BLAST of CX306023 vs. ExPASy Swiss-Prot
Match: CHIC_SECCE (Basic endochitinase C OS=Secale cereale GN=rscc PE=1 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 1.480e-47 Identity = 92/163 (56.44%), Postives = 110/163 (67.48%), Query Frame = 3 Query: 3 CPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGVASSDYCDPN--YPCR--GKCYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWSWMTAQPPKPSCHEVIIDEWKPPAND 479 C A+ FYTYDAF+ AA AFP FG +G+ RKR++AAF AQT HETTGGW AP G +AWGYCF +E G A++DYC P+ +PC + YGRGPIQLS NYNY NPDL+ATDP +SFK+A+W WMTAQ PKPS H VI +W P D Sbjct: 46 CQAKGFYTYDAFVAAANAFPGFGATGSTDARKRDVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERG-AAADYCTPSAQWPCAPGKRYYGRGPIQLSHNYNY--GPAGRAIGVDLLRNPDLVATDPTVSFKTALWFWMTAQAPKPSSHAVITGKWSPSGAD 205
BLAST of CX306023 vs. ExPASy Swiss-Prot
Match: CHI1_ORYSJ (Chitinase 1 OS=Oryza sativa subsp. japonica GN=Cht1 PE=2 SV=1) HSP 1 Score: 187.963 bits (476), Expect = 1.933e-47 Identity = 90/164 (54.88%), Postives = 107/164 (65.24%), Query Frame = 3 Query: 3 CPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNRE-VGVASSDYC--DPNYPCRG--KCYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWSWMTAQPPKPSCHEVIIDEWKPPAND 479 CPA+ FYTYDAF+ AA AFP+F +G+ RKRE+AAF AQT HETTGGW AP G Y+WGYCF E G SDYC +PC K YGRGPIQ+S+NYNY +NPDL+A+D +SFK+A W WMT Q PKPSCH V+ +W P ND Sbjct: 100 CPAKNFYTYDAFVAAANAFPSFATTGDAATRKREVAAFLAQTSHETTGGWATAPDGPYSWGYCFKEENNGNVGSDYCVQSSQWPCAAGKKYYGRGPIQISYNYNY--GPAGQAIGSNLLSNPDLVASDATVSFKTAFWFWMTPQSPKPSCHAVMTGQWTPNGND 261
BLAST of CX306023 vs. ExPASy Swiss-Prot
Match: CHI1_HORVU (26 kDa endochitinase 1 OS=Hordeum vulgare PE=2 SV=4) HSP 1 Score: 186.808 bits (473), Expect = 4.307e-47 Identity = 94/163 (57.67%), Postives = 109/163 (66.87%), Query Frame = 3 Query: 3 CPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGVASSDYCDPN--YPCR-GKC-YGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWSWMTAQPPKPSCHEVIIDEWKPPAND 479 C A+ FYTYDAF+ AA AF FG +G RKRE+AAF AQT HETTGGW AP G +AWGYCF +E G A+S+YC P+ +PC GK YGRGPIQLS NYNY NPDL+ATDP +SFK+A+W WMTAQ PKPS H VI +W P D Sbjct: 98 CQAKGFYTYDAFVAAASAFRGFGTTGGTDTRKREVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERG-ATSNYCTPSAQWPCAPGKSYYGRGPIQLSHNYNY--GPAGRAIGVDLLRNPDLVATDPTVSFKTAMWFWMTAQAPKPSSHAVITGQWSPSGTD 257
BLAST of CX306023 vs. ExPASy Swiss-Prot
Match: CHI3_ORYSJ (Chitinase 3 OS=Oryza sativa subsp. japonica GN=Cht3 PE=2 SV=2) HSP 1 Score: 185.267 bits (469), Expect = 1.253e-46 Identity = 87/163 (53.37%), Postives = 106/163 (65.03%), Query Frame = 3 Query: 3 CPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGVASSDYCD--PNYPCRG--KCYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWSWMTAQPPKPSCHEVIIDEWKPPAND 479 C A+ FYTYDAF+ AA A+P F +G+ KRE+AAF AQT HETTGGWP AP G Y+WGYCF E + YC+ P +PC K YGRGPIQ+++NYNY NNPDL+A+D +SFK+A W WMT Q PKPSCH VI +W P A+D Sbjct: 97 CAAKGFYTYDAFVAAANAYPDFATTGDADTCKREVAAFLAQTSHETTGGWPTAPDGPYSWGYCFKEENNGNAPTYCEPKPEWPCAAGKKYYGRGPIQITYNYNY--GPAGQAIGSDLLNNPDLVASDATVSFKTAFWFWMTPQSPKPSCHAVITGQWTPSADD 257
BLAST of CX306023 vs. ExPASy Swiss-Prot
Match: CHI2_ORYSJ (Chitinase 2 OS=Oryza sativa subsp. japonica GN=Cht2 PE=1 SV=1) HSP 1 Score: 185.267 bits (469), Expect = 1.253e-46 Identity = 91/163 (55.83%), Postives = 108/163 (66.26%), Query Frame = 3 Query: 3 CPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGVASSDYCDPN--YPCR--GKCYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWSWMTAQPPKPSCHEVIIDEWKPPAND 479 CPAR FYTY+AF+ AA AFPAFG +GN RKRE+AAF QT HETTGGWP AP G ++WGYCF +E SDYC P+ +PC K YGRGPIQLS+N+NY +NPDL+ATD +SFK+A+W WMT Q KPS H+VI W P D Sbjct: 110 CPARGFYTYEAFLAAAAAFPAFGGTGNTETRKREVAAFLGQTSHETTGGWPTAPDGPFSWGYCFKQEQN-PPSDYCQPSPEWPCAPGRKYYGRGPIQLSFNFNY--GPAGRAIGVDLLSNPDLVATDATVSFKTALWFWMTPQGNKPSSHDVITGRWAPSPAD 269
BLAST of CX306023 vs. ExPASy Swiss-Prot
Match: CHID_SOLLC (Basic endochitinase (Fragment) OS=Solanum lycopersicum GN=CHI14 PE=2 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 1.061e-45 Identity = 89/163 (54.60%), Postives = 106/163 (65.03%), Query Frame = 3 Query: 3 CPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGVASSDYC--DPNYPCR--GKCYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWSWMTAQPPKPSCHEVIIDEWKPPAND 479 C A+ FYTY+AFI A K F AFG +G+ R +EIAAF AQT HETTGGW AP G Y+WGYC+NRE G + DYC +PC K +GRGPIQ+S+NYNY NNPDL+A D V+SFK+A+W WMTAQ PKPS H+VI W P D Sbjct: 26 CGAKGFYTYEAFITATKTFAAFGTTGDTNTRNKEIAAFLAQTSHETTGGWATAPDGPYSWGYCYNREQG-SPGDYCASSQQWPCAPGKKYFGRGPIQISYNYNY--GAAGSAIGVNLLNNPDLVANDAVVSFKTALWFWMTAQQPKPSAHDVITGRWSPSVAD 185
BLAST of CX306023 vs. ExPASy Swiss-Prot
Match: CHIX_PEA (Endochitinase OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 4.457e-44 Identity = 88/162 (54.32%), Postives = 104/162 (64.20%), Query Frame = 3 Query: 3 CPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGVASSDYCDP-NYPCR--GKCYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWSWMTAQPPKPSCHEVIIDEWKPPAND 479 C FYTYDAFI AA++F FG +G++ +K+E+AAF AQT HETTGGWP AP G YAWGYCF E YC P ++PC K YGRGPIQL+ NYNY NNPDLL+T+P +SFK+AIW WMT Q KPS H+VI W P A D Sbjct: 101 CAGHGFYTYDAFIAAARSFNGFGTTGDDNTKKKELAAFLAQTSHETTGGWPTAPDGPYAWGYCFVSEQN-TQEVYCSPKDWPCAPGKKYYGRGPIQLTHNYNY--GLAGQAIKEDLINNPDLLSTNPTVSFKTAIWFWMTPQANKPSSHDVITGRWTPSAAD 259 The following BLAST results are available for this feature:
BLAST of CX306023 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX306023 ID=CX306023; Name=CX306023; organism=Citrus clementina; type=EST; length=485bpback to top |