CX306023
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX306023 vs. ExPASy Swiss-Prot
Match: CHI12_ORYSJ (Chitinase 12 OS=Oryza sativa subsp. japonica GN=Cht12 PE=2 SV=2) HSP 1 Score: 176.022 bits (445), Expect = 7.603e-44 Identity = 88/165 (53.33%), Postives = 103/165 (62.42%), Query Frame = 3 Query: 3 CPARCFYTYDAFIEAAKAFPAFGNSGNET-MRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNRE-VGVASSDYCDPN--YPCRG--KCYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWSWMTAQPPKPSCHEVIIDEWKPPAND 479 CPA FYTYDAF+ AA AFP F +G + KRE+AAF AQT HETTGGW AP G YAWGYCF E G A DYC + +PC K YGRGPIQLS+N+NY +PDL+A+D +SF +A W WMT Q PKPSCH V +W P A+D Sbjct: 102 CPASNFYTYDAFVAAASAFPGFAAAGGDADTNKREVAAFLAQTSHETTGGWATAPDGPYAWGYCFKEENGGAAGPDYCQQSAQWPCAAGKKYYGRGPIQLSYNFNY--GPAGQAIGADLLGDPDLVASDATVSFDTAFWFWMTPQSPKPSCHAVATGQWTPSADD 264
BLAST of CX306023 vs. ExPASy Swiss-Prot
Match: CHI11_ORYSJ (Chitinase 11 OS=Oryza sativa subsp. japonica GN=Cht11 PE=2 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 6.436e-43 Identity = 83/154 (53.90%), Postives = 103/154 (66.88%), Query Frame = 3 Query: 18 FYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGVASSDYCDPNYPCRGKCYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWSWMTAQPPKPSCHEVIIDEWKPPAND 479 FYTYDAFI+AA FP FG +GN+ R+RE+AAFF QT HETTGGW AP G +AWGYC E+ + DP Y YGRGPIQL+ YNY NNPDL+++DPV++F++AIW WMTAQ PKPSCH+VI ++W P +D Sbjct: 52 FYTYDAFIKAAGDFPRFGTTGNDETRRRELAAFFGQTSHETTGGWATAPDGPFAWGYCRVNEITPS-----DPPY------YGRGPIQLTHKYNYQ--LAGDALGLDLVNNPDLVSSDPVVAFRTAIWFWMTAQSPKPSCHDVITNQWTPSGDD 192
BLAST of CX306023 vs. ExPASy Swiss-Prot
Match: CHIA_SOLCI (Acidic endochitinase pcht28 OS=Solanum chilense PE=2 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 1.753e-40 Identity = 83/159 (52.20%), Postives = 100/159 (62.89%), Query Frame = 3 Query: 3 CPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGVASSDYCDPNYPCRGKCYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWSWMTAQPPKPSCHEVIIDEWKPPAND 479 CPA+ FYTYDAFI AA +FP FG +G++T RK+EIAAFF QT HET GG G + GYCF R++ D D + YGRGPIQL+ NY R NNPDL+ATDP++SF++AIW WMTAQ KPSCH VII +W P D Sbjct: 48 CPAKGFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETKGG----SAGTFTGGYCFVRQI-----DQSD-------RYYGRGPIQLTHQSNYERAGQGIGVGQDLVNNPDLVATDPIISFRTAIWFWMTAQDNKPSCHNVIIGQWTPSPAD 190
BLAST of CX306023 vs. ExPASy Swiss-Prot
Match: CHIA_SOLLC (Acidic 26 kDa endochitinase OS=Solanum lycopersicum GN=CHI3 PE=1 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 3.905e-40 Identity = 82/159 (51.57%), Postives = 99/159 (62.26%), Query Frame = 3 Query: 3 CPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGVASSDYCDPNYPCRGKCYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWSWMTAQPPKPSCHEVIIDEWKPPAND 479 CPA+ FYTYDAFI AA +FP FG +G++T RK+EIAAFF QT HET GG G + GYCF +++ SD + YGRGPIQL+ NY R NNPDL+ATDP++SFK+AIW WMT Q KPSCH VII +W P D Sbjct: 48 CPAKGFYTYDAFIAAANSFPGFGTAGDDTARKKEIAAFFGQTSHETNGG----SAGTFTGGYCFVKQI--EQSD----------RYYGRGPIQLTHQSNYERAGQGIGVGQELVNNPDLVATDPIISFKTAIWFWMTEQDNKPSCHNVIIGQWTPSPKD 190
BLAST of CX306023 vs. ExPASy Swiss-Prot
Match: CHI10_ORYSJ (Chitinase 10 OS=Oryza sativa subsp. japonica GN=Cht10 PE=2 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 2.531e-39 Identity = 79/164 (48.17%), Postives = 102/164 (62.20%), Query Frame = 3 Query: 3 CPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGVASS--DYCDPNYPC-RGKCY-GRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWSWMTAQPPKPSCHEVIIDEWKPPANDV 482 CPAR FYTY +F+ AA FP F +G RKRE+AAF AQ HETTGGW AP G YAWG C+ E+ SS D D +PC GK Y GRGPIQ+SWN+NY NP+++A ++F++A+W WMT + KPSCH+V++ E++P DV Sbjct: 70 CPARGFYTYASFVRAATRFPRFAATGCADARKREVAAFLAQISHETTGGWATAPDGPYAWGLCYKEEINPQSSYCDATDKQWPCYPGKSYHGRGPIQISWNFNY--GPAGQALGFDGLRNPEIVANCSDIAFQTALWFWMTPRDTKPSCHQVMVGEYRPGPADV 231
BLAST of CX306023 vs. ExPASy Swiss-Prot
Match: CHIB_SOLLC (Acidic 27 kDa endochitinase OS=Solanum lycopersicum GN=CHI17 PE=1 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 4.317e-39 Identity = 85/161 (52.80%), Postives = 100/161 (62.11%), Query Frame = 3 Query: 3 CPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGVASSDYCDPNYPCRGKCYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWSWMTAQPPKPSCHEVIIDEWKPPANDVN 485 CPA+ FYTYDAFI AA +FP FG +G++T RK+EIAAFF QT HETTGG A G +A GYCF RE S + YGRGPIQL+ NY NNPDL+ATD +SFK+AIW WMTAQ KPSCH+VI +W P A D + Sbjct: 40 CPAKGFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETTGGSLSA-DGPFAGGYCFVREGNQMGSGF-----------YGRGPIQLTGQSNY--DLAGQAIGQDLVNNPDLVATDATVSFKTAIWFWMTAQGNKPSCHDVITGQWTPSAADAS 186
BLAST of CX306023 vs. ExPASy Swiss-Prot
Match: CHI8_POPTR (Endochitinase WIN8 OS=Populus trichocarpa GN=WIN8 PE=2 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 4.317e-39 Identity = 78/165 (47.27%), Postives = 99/165 (60.00%), Query Frame = 3 Query: 3 CPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGVASSDYCDP----NYPCRGKCYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWSWMTAQPP-KPSCHEVIIDEWKPPANDV 482 CP + FYTYDA+ A + +P FG +G++ RKRE+AAFFAQT ET+G + WGYC E+ +SDYCDP +YPC YGRGP+QL WNYNY C + P+ +ATDPVLSF++A+W WM PSCHEVI EW P D+ Sbjct: 84 CPGKGFYTYDAYFVATEFYPGFGMTGDDDTRKRELAAFFAQTSQETSGRSIIGEDAPFTWGYCLVNELN-PNSDYCDPKTKSSYPCVADYYGRGPLQLRWNYNYGEC--GNYLGQNLLDEPEKVATDPVLSFEAALWFWMNPHSTGAPSCHEVITGEWSPSEADI 245
BLAST of CX306023 vs. ExPASy Swiss-Prot
Match: CHI8_ORYSJ (Chitinase 8 OS=Oryza sativa subsp. japonica GN=Cht8 PE=2 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 2.798e-38 Identity = 84/160 (52.50%), Postives = 99/160 (61.88%), Query Frame = 3 Query: 3 CPARCFYTYDAFIEAAKAFPAFGNSGNET-MRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGVASSDYCDPNYPCRGKCYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWSWMTAQPPKPSCHEVIIDEWKPPAND 479 CPAR FYTYDAFI AA +FPAFG SG + +RE+AAFF QT HETTGG ++ WGYCF E+ A+S P Y YGRGPIQL+ NY NPDL++TD V+SFK+AIW WMTAQ KPSCH+VI+ W P A D Sbjct: 53 CPARGFYTYDAFIAAANSFPAFGTSGGSAELIRRELAAFFGQTSHETTGG-TRGSSDQFQWGYCFKEEINKATS----PPY------YGRGPIQLTGQSNYQAA--GNALGLDLVGNPDLVSTDAVVSFKTAIWFWMTAQGNKPSCHDVILGRWTPSAAD 199
BLAST of CX306023 vs. ExPASy Swiss-Prot
Match: CHIT_PETHY (Acidic endochitinase OS=Petunia hybrida PE=2 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 1.389e-37 Identity = 85/163 (52.15%), Postives = 98/163 (60.12%), Query Frame = 3 Query: 9 ARCF----YTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGVASSDYCDPNYPCRGKCYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWSWMTAQPPKPSCHEVIIDEWKPPANDVN 485 ARCF YTYDAFI AA +FP FG +G++T RK+EIAAFF QT HETTGG +P G YA GYCF RE + Y YGRGPIQL+ NY NNPDL+ATD +SFK+AIW WMT Q KPSCH+VI W P A D + Sbjct: 45 ARCFAVRFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETTGG-TLSPDGPYAGGYCFLREGNQMGNGY-----------YGRGPIQLTGQSNY--DLAGKAIEQDLVNNPDLVATDATVSFKTAIWFWMTPQGNKPSCHDVITGRWTPSAADTS 193
BLAST of CX306023 vs. ExPASy Swiss-Prot
Match: CHIT_AVESA (Endochitinase (Fragments) OS=Avena sativa PE=1 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 2.005e-36 Identity = 77/156 (49.36%), Postives = 94/156 (60.26%), Query Frame = 3 Query: 12 RCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGVASSDYCDPNYPCRGKCYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWSWMTAQPPKPSCHEVIIDEWKPPAND 479 R FYTYDAFI AAK+FPAF +G+ +RKRE+AAF AQT HETTGGWP AP G Y G ++SDY +GRGPIQ+S+NYNY NPDL+ +D + FK+A+W WMT Q PKPS H+VI W P + D Sbjct: 17 RGFYTYDAFIAAAKSFPAFATTGSTDVRKREVAAFLAQTSHETTGGWPTAPDGPYELG---------STSDY-----------FGRGPIQISYNYNY--GAAGKAIGVDLLRNPDLVTSDNTVEFKTALWFWMTPQSPKPSSHDVITGRWSPSSTD 150 The following BLAST results are available for this feature:
BLAST of CX306023 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >CX306023 ID=CX306023; Name=CX306023; organism=Citrus clementina; type=EST; length=485bpback to top |