CX306023
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX306023 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSJ (Chitinase 7 OS=Oryza sativa subsp. japonica GN=Cht7 PE=2 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 3.421e-36 Identity = 80/164 (48.78%), Postives = 105/164 (64.02%), Query Frame = 3 Query: 3 CPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGVASSDYCDPN--YPCR-GKCY-GRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWSWMTAQ-PPKPSCHEVIIDEWKPPAND 479 CPAR FY Y AF+ AA AFPAF +G+ RKRE+AAF AQT H T+ GG Y+WGYC+ +EV A+SD+C PN +PC GK Y RGP+Q+++NYNY NP+L+ATDP ++FK+A+W WMTA+ P +PS H V+ +W P D Sbjct: 118 CPARGFYAYRAFVAAAGAFPAFAATGDADTRKREVAAFLAQTSHATS-------GGPYSWGYCY-KEVKGATSDFCVPNARWPCAPGKAYHARGPMQIAYNYNY--GAAGEAIGADLLGNPELVATDPTVAFKTALWLWMTARSPSQPSPHAVVTGQWTPTPAD 271
BLAST of CX306023 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSI (Chitinase 7 OS=Oryza sativa subsp. indica GN=Cht7 PE=2 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 3.421e-36 Identity = 80/164 (48.78%), Postives = 105/164 (64.02%), Query Frame = 3 Query: 3 CPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGVASSDYCDPN--YPCR-GKCY-GRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWSWMTAQ-PPKPSCHEVIIDEWKPPAND 479 CPAR FY Y AF+ AA AFPAF +G+ RKRE+AAF AQT H T+ GG Y+WGYC+ +EV A+SD+C PN +PC GK Y RGP+Q+++NYNY NP+L+ATDP ++FK+A+W WMTA+ P +PS H V+ +W P D Sbjct: 118 CPARGFYAYRAFVAAAGAFPAFAATGDADTRKREVAAFLAQTSHATS-------GGPYSWGYCY-KEVKGATSDFCVPNARWPCAPGKAYHARGPMQIAYNYNY--GAAGEAIGADLLGNPELVATDPTVAFKTALWLWMTARSPSQPSPHAVVTGQWTPTPAD 271
BLAST of CX306023 vs. ExPASy Swiss-Prot
Match: CHIP_TOBAC (Acidic endochitinase P OS=Nicotiana tabacum PE=1 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 4.468e-36 Identity = 82/159 (51.57%), Postives = 97/159 (61.01%), Query Frame = 3 Query: 3 CPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGVASSDYCDPNYPCRGKCYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWSWMTAQPPKPSCHEVIIDEWKPPAND 479 CPA FYTYDAFI AA +FP FG SG++T R++EIAAFF QT HETTGG A + GYCF R+ +D D + YGRGPIQL+ NY + NNPDL+ATD +SFK+AIW WMT Q KPS H+VII W P A D Sbjct: 48 CPANGFYTYDAFIAAANSFPGFGTSGDDTARRKEIAAFFGQTSHETTGGSLSAE--PFTGGYCFVRQ-----NDQSD-------RYYGRGPIQLTNQNNYEKA--GNAIRQDLVNNPDLVATDATISFKTAIWFWMTPQDNKPSSHDVIIGSWTPSAAD 190
BLAST of CX306023 vs. ExPASy Swiss-Prot
Match: CHIQ_TOBAC (Acidic endochitinase Q OS=Nicotiana tabacum PE=1 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 9.953e-36 Identity = 81/159 (50.94%), Postives = 97/159 (61.01%), Query Frame = 3 Query: 3 CPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGVASSDYCDPNYPCRGKCYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWSWMTAQPPKPSCHEVIIDEWKPPAND 479 CPA FYTYDAFI AA +FP FG +G++T R++EIAAFF QT HETTGG A + GYCF R+ +D D + YGRGPIQL+ NY + NNPDL+ATD +SFK+AIW WMT Q KPS H+VII W P A D Sbjct: 48 CPANGFYTYDAFIAAANSFPGFGTTGDDTARRKEIAAFFGQTSHETTGGSLSAE--PFTGGYCFVRQ-----NDQSD-------RYYGRGPIQLTNRNNYEKA--GTAIGQELVNNPDLVATDATISFKTAIWFWMTPQDNKPSSHDVIIGRWTPSAAD 190
BLAST of CX306023 vs. ExPASy Swiss-Prot
Match: CHIB_POPTR (Acidic endochitinase WIN6.2B OS=Populus trichocarpa PE=2 SV=2) HSP 1 Score: 144.05 bits (362), Expect = 3.202e-34 Identity = 73/159 (45.91%), Postives = 85/159 (53.46%), Query Frame = 3 Query: 3 CPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGVASSDYCDPNYPCRGKCYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWSWMTAQPPKPSCHEVIIDEWKPPAND 479 CPA FYTY+AFI AAK FP FGN+G++ MRKREIAAF QT HET G WP A G +Y WGYC NYNY C P+L+ TDP ++FK+A+W WMT Q PKPSCH VI + W P A D Sbjct: 106 CPAVGFYTYNAFISAAKEFPDFGNTGDDLMRKREIAAFLGQTSHETNGWWPAAQGDQYDWGYCH-------------------------------MNYNYGLCGDDLNLPLL--QEPELVETDPFIAFKTALWFWMTPQSPKPSCHAVITESWTPSAAD 231
BLAST of CX306023 vs. ExPASy Swiss-Prot
Match: AGI_URTDI (Lectin/endochitinase 1 OS=Urtica dioica GN=UDA1 PE=1 SV=3) HSP 1 Score: 126.331 bits (316), Expect = 6.909e-29 Identity = 64/154 (41.56%), Postives = 92/154 (59.74%), Query Frame = 3 Query: 3 CPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGVASSDYC-DPNYPC-RGKCYG-RGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWSWMTAQPPKPSCHEVIID 455 CP++ FY+Y +F+ AA++FPAFG G+ RKRE+AAF A T+G D +AWG C V +D+C ++PC GK Y RGPIQL+ N+NY NPDL+ DP++SFK+A+W WM+ KPSCH+++++ Sbjct: 149 CPSQGFYSYHSFLVAAESFPAFGTIGDVATRKREVAAFLAHISQATSGERSDVE-NPHAWGLCHINTTTVTENDFCTSSDWPCAAGKKYSPRGPIQLTHNFNY--GLAGQAIGEDLIQNPDLVEKDPIISFKTALWFWMSQHDNKPSCHDIVLN 299
BLAST of CX306023 vs. ExPASy Swiss-Prot
Match: CHI4_BRANA (Basic endochitinase CHB4 OS=Brassica napus PE=1 SV=2) HSP 1 Score: 103.99 bits (258), Expect = 3.672e-22 Identity = 60/146 (41.10%), Postives = 78/146 (53.42%), Query Frame = 3 Query: 3 CPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGVASSDYCDPN---YPCR-GKCY-GRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWSWMTAQPP 425 C + FYT D+FI AA FP F NS + +REIA FA HET +C+ E+ AS DYCD N YPC GK Y GRGPIQLSWNYNY C P+L++++P ++F++ +W WM + P Sbjct: 92 CAGKNFYTRDSFINAANTFPNFANS----VTRREIATMFAHFTHET-------------GHFCYIEEINGASRDYCDENNRQYPCAPGKGYFGRGPIQLSWNYNYGAC--GQSLNLNLLGQPELVSSNPTVAFRTGLWFWMNSVRP 218
BLAST of CX306023 vs. ExPASy Swiss-Prot
Match: CHIT_DIOJA (Acidic endochitinase OS=Dioscorea japonica PE=1 SV=2) HSP 1 Score: 102.834 bits (255), Expect = 8.180e-22 Identity = 53/140 (37.86%), Postives = 76/140 (54.29%), Query Frame = 3 Query: 3 CPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGVASSDYCDPN--YPC--RGKCYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWSWM 410 CP + FYT F+EA A+P FG + RKREIAA+FA HET C+ E +++YC + YPC + +GRGP+QLSWNYNY+ N+PD++ DP++SFK+++W W+ Sbjct: 66 CPGKSFYTRSNFLEAVSAYPGFGTKCTDEDRKREIAAYFAHVTHET-------------GHLCYIEERDGHANNYCQESQQYPCNPNKEYFGRGPMQLSWNYNYI--DAGKELHFDGLNDPDIVGRDPIISFKTSLWFWI 190
BLAST of CX306023 vs. ExPASy Swiss-Prot
Match: CHI6_ORYSJ (Chitinase 6 OS=Oryza sativa subsp. japonica GN=Cht6 PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 1.068e-21 Identity = 57/140 (40.71%), Postives = 77/140 (55.00%), Query Frame = 3 Query: 3 CPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGVASSDYCD---PNYPC-RGK-CYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWSW 407 C A+ FYT DAF+ AA +P+FG +G+ KREIAAFFA HET +C+ E+ S +YCD +PC GK YGRGP+Q+SWN+NY +PD +A PVL+F++A+W W Sbjct: 88 CAAKGFYTRDAFLTAAGGYPSFGRTGSVDDSKREIAAFFAHANHETI-------------KFCYIEEIDGPSKNYCDETSTQWPCMAGKGYYGRGPLQISWNFNY--GPAGQSIGFDGLGDPDAVARSPVLAFQTALWYW 212
BLAST of CX306023 vs. ExPASy Swiss-Prot
Match: CHI5_ORYSJ (Chitinase 5 OS=Oryza sativa subsp. japonica GN=Cht5 PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 2.380e-21 Identity = 59/166 (35.54%), Postives = 81/166 (48.80%), Query Frame = 3 Query: 3 CPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGVASSDYCDPN---YPCR--GKCYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWSWMTAQPPKPSCHEVIIDEWKPPANDVN 485 C + FYT +F+ AA ++ F KREIAAFFA HET C+ E+ AS DYCD N +PC+ K YGRGP+Q+SWNYNY +PD +A DP +SFK+A+W WM + H+V++ + +N Sbjct: 107 CAGKNFYTRQSFLNAAHSYSGFARDRTNDDSKREIAAFFAHVTHET-------------GHMCYINEINGASMDYCDKNNKQWPCQPGKKYYGRGPLQISWNYNY--GPAGQNIGFDGLRDPDRVAQDPTISFKTALWFWMN------NVHQVMLQGFGATIRAIN 251 The following BLAST results are available for this feature:
BLAST of CX306023 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >CX306023 ID=CX306023; Name=CX306023; organism=Citrus clementina; type=EST; length=485bpback to top |