CX306023
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX306023 vs. ExPASy Swiss-Prot
Match: CHI4_ORYSJ (Chitinase 4 OS=Oryza sativa subsp. japonica GN=Cht4 PE=2 SV=2) HSP 1 Score: 100.523 bits (249), Expect = 4.060e-21 Identity = 54/141 (38.30%), Postives = 74/141 (52.48%), Query Frame = 3 Query: 3 CPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGVASSDYCDPN---YPCR--GKCYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWSWM 410 C + FYT +F+ AA+++ F N KREIAAFFA HET C+ E+ A+ DYCD + +PC+ K YGRGP+Q+SWN+NY +PD +A DP +SFK+A+W WM Sbjct: 104 CAGKSFYTRQSFLNAARSYSGFANDRTNDDSKREIAAFFAHVTHET-------------GHMCYINEINGANMDYCDKSNKQWPCQPGKKYYGRGPLQISWNFNY--GPAGKNIGFDGLRDPDKVAQDPTISFKTALWFWM 229
BLAST of CX306023 vs. ExPASy Swiss-Prot
Match: CHIB_MAIZE (Endochitinase B (Fragment) OS=Zea mays PE=1 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 5.302e-21 Identity = 55/143 (38.46%), Postives = 75/143 (52.45%), Query Frame = 3 Query: 3 CPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGVASSDYCDP---NYPCRG--KCYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWSWMTA 416 C + FYT AF+ A K +P F + G++ KREIAAFFA HET +C+ E+ S+ YCDP +PC K YGRGP+Q+SWNYNY +P +A D V++FK+A+W WM + Sbjct: 89 CEGKNFYTRSAFLSAVKGYPGFAHGGSQVQGKREIAAFFAHATHET-------------GHFCYISEIN-KSNAYCDPTKRQWPCAAGQKYYGRGPLQISWNYNY--GPAGRAIGFDGLGDPGRVARDAVVAFKAALWFWMNS 215
BLAST of CX306023 vs. ExPASy Swiss-Prot
Match: CHIP_BETVU (Acidic endochitinase SP2 OS=Beta vulgaris GN=SP2 PE=1 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 9.044e-21 Identity = 62/144 (43.06%), Postives = 71/144 (49.31%), Query Frame = 3 Query: 3 CPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNRE-VGVASSDYCDPN----YPCRG--KCYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWSWMT 413 CP + FYT AF+ A P FGN G+ KREIAAFFA HETT C E G YCD + YPC K YGRGP+QLSWNYNY NP+ +ATD SFK+A+W WMT Sbjct: 107 CPGKNFYTRAAFLSAVD--PKFGNEGSSDDNKREIAAFFAHISHETT-------------NLCHIEERDGDVGDAYCDQDKAAQYPCAAGKKYYGRGPLQLSWNYNY--ALAGQAIGFDGLGNPEKVATDVNTSFKAAMWFWMT 233
BLAST of CX306023 vs. ExPASy Swiss-Prot
Match: CHIA_MAIZE (Endochitinase A OS=Zea mays PE=1 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 4.489e-20 Identity = 55/141 (39.01%), Postives = 74/141 (52.48%), Query Frame = 3 Query: 3 CPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGVASSDYCDPN---YPCRG--KCYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWSWM 410 C + FYT AF+ A A+P F + G E KREIAAFFA HET +C+ E+ S+ YCD + +PC K YGRGP+Q+SWNYNY +P+ +A D V++FK+A+W WM Sbjct: 100 CEGKNFYTRSAFLSAVNAYPGFAHGGTEVEGKREIAAFFAHVTHET-------------GHFCYISEIN-KSNAYCDASNRQWPCAAGQKYYGRGPLQISWNYNY--GPAGRDIGFNGLADPNRVAQDAVIAFKTALWFWM 224
BLAST of CX306023 vs. ExPASy Swiss-Prot
Match: CHI4_PHAVU (Endochitinase PR4 OS=Phaseolus vulgaris GN=CHI4 PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 5.862e-20 Identity = 56/142 (39.44%), Postives = 72/142 (50.70%), Query Frame = 3 Query: 3 CPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGVASSDYCD----PNYPCRGK--CYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWSWM 410 C + FYT DAF+ A ++ FG G+E KREIAA FA HET +C+ E+ AS DYCD YPC +GRGPIQLSWN+NY P+ ++ D V+SFK+A+W WM Sbjct: 88 CAGKNFYTRDAFLSALNSYTDFGRVGSEDDSKREIAAAFAHFTHET-------------GHFCYIEEIDGASKDYCDEESIAQYPCSSSKGYHGRGPIQLSWNFNY--GPAGSANNFDGLGAPETVSNDVVVSFKTALWYWM 214 The following BLAST results are available for this feature:
BLAST of CX306023 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >CX306023 ID=CX306023; Name=CX306023; organism=Citrus clementina; type=EST; length=485bpback to top |