CX306054

Overview
NameCX306054
Unique NameCX306054
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length468
Libraries
Library NameType
Drought1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX306054 vs. ExPASy Swiss-Prot
Match: HEVL_ARATH (Hevein-like protein OS=Arabidopsis thaliana GN=HEL PE=1 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 3.324e-38
Identity = 68/106 (64.15%), Postives = 82/106 (77.36%), Query Frame = -3 
Query:  149 QIGWDLTAASAFCATWDANKPLAWRQKYGWTAFCHSGGPIGQAACGRCLRVTNSGTGAQQIVRIVDQCANGGLDLDEGVFKKLDTNGIGYQQGFLTVSYEFVNCND 466
            Q  WDL A SA+C+TWDA+KP AWR KYGWTAFC   GP GQA+CG+CLRV N+ T A   VRIVDQC+NGGLDLD  +F ++DT+G GYQQG L V Y+FV+C +
Sbjct:   88 QNNWDLRAVSAYCSTWDADKPYAWRSKYGWTAFCGPAGPRGQASCGKCLRVKNTRTNAAVTVRIVDQCSNGGLDLDVAMFNQIDTDGFGYQQGHLIVDYQFVDCGN 193
[Close]
BLAST of CX306054 vs. ExPASy Swiss-Prot
Match: WIN_SOYBN (Wound-induced protein (Fragment) OS=Glycine max GN=WIN PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 7.929e-32
Identity = 59/87 (67.82%), Postives = 72/87 (82.76%), Query Frame = -3 
Query:  149 KPLAWRQKYGWTAFCHSGGPIGQAACGRCLRVTNSGTGAQQIVRIVDQCANGGLDLDEGVFKKLDTNGIGYQQGFLTVSYEFVNCND 409
            KP +WR KYGWTAFC   GP G+ +CG+CLRVTN+GTGA  IVRIVDQC+NGGLDLD GVF ++DT+G GYQQG L V+Y+FV+C +
Sbjct:    1 KPYSWRSKYGWTAFCGPVGPRGRDSCGKCLRVTNTGTGANTIVRIVDQCSNGGLDLDVGVFNRIDTDGRGYQQGHLIVNYQFVDCGN 87
The following BLAST results are available for this feature:
BLAST of CX306054 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
HEVL_ARATH3.324e-3864.15Hevein-like protein OS=Arabidopsis thaliana GN=HEL... [more]
WIN_SOYBN7.929e-3267.82Wound-induced protein (Fragment) OS=Glycine max GN... [more]

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Properties
Property NameValue
Genbank descriptionC18013D08Rv Drought1 Citrus clementina cDNA clone C18013D08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX306054 ID=CX306054; Name=CX306054; organism=Citrus clementina; type=EST; length=468bp
TTTTTTTTTTTTTTTTTTTTGCTTGATACTTCATCAGAAGTTTTATTTTT
ATTTATGAACTAAGTATATAGAGGGATAATTAATTAATAAATTAACCCTA
TTACAGCATTAAGCTTCGATCGATCATGGAATTATAGATGGTGCTTTAAT
CATTGCAGTTCACAAACTCGTAGCTGACAGTAAGGAAGCCTTGTTGATAG
CCTATTCCATTGGTGTCCAATTTCTTGAACACTCCTTCGTCCAAATCTAA
GCCTCCATTGGCACACTGATCAACAATTCTCACAATTTGTTGGGCTCCTG
TACCACTGTTTGTGACCCTTAAGCACCTGCCACAAGCAGCTTGTCCAATG
GGTCCGCCCGAATGACAGAAAGCAGTCCAGCCATATTTCTGGCGCCAGGC
CAAGGGCTTGTTGGCATCCCATGTTGCGCAGAAAGCGCTCGCTGCCGTCA
AGTCCCATCCAATTTGTT
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