CX306064

Overview
NameCX306064
Unique NameCX306064
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length435
Libraries
Library NameType
Drought1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX306064 vs. ExPASy Swiss-Prot
Match: WIN1_SOLTU (Wound-induced protein WIN1 OS=Solanum tuberosum GN=WIN1 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 4.964e-24
Identity = 49/77 (63.64%), Postives = 61/77 (79.22%), Query Frame = -1 
Query:  205 WTAFCHSGGPIGQAACGRCLRVTNSGTGAQQIVRIVDQCANGGLDLDEGVFKKLDTNGIGYQQGFLTVSYEFVNCND 435
            WTAFC   GP G+ +CG+CLRVTN+ TGAQ  VRIVDQC+NGGLDLD  VF+++DT+G G  QG L V+Y+FV+C D
Sbjct:  123 WTAFCGPVGPRGRDSCGKCLRVTNTRTGAQTTVRIVDQCSNGGLDLDVNVFRQIDTDGNGNHQGHLIVNYQFVDCGD 199
[Close]
BLAST of CX306064 vs. ExPASy Swiss-Prot
Match: HEVL_ARATH (Hevein-like protein OS=Arabidopsis thaliana GN=HEL PE=1 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 4.964e-24
Identity = 48/77 (62.34%), Postives = 59/77 (76.62%), Query Frame = -1 
Query:  205 WTAFCHSGGPIGQAACGRCLRVTNSGTGAQQIVRIVDQCANGGLDLDEGVFKKLDTNGIGYQQGFLTVSYEFVNCND 435
            WTAFC   GP GQA+CG+CLRV N+ T A   VRIVDQC+NGGLDLD  +F ++DT+G GYQQG L V Y+FV+C +
Sbjct:  117 WTAFCGPAGPRGQASCGKCLRVKNTRTNAAVTVRIVDQCSNGGLDLDVAMFNQIDTDGFGYQQGHLIVDYQFVDCGN 193
The following BLAST results are available for this feature:
BLAST of CX306064 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
WIN1_SOLTU4.964e-2463.64Wound-induced protein WIN1 OS=Solanum tuberosum GN... [more]
HEVL_ARATH4.964e-2462.34Hevein-like protein OS=Arabidopsis thaliana GN=HEL... [more]

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Properties
Property NameValue
Genbank descriptionC18013E08Rv Drought1 Citrus clementina cDNA clone C18013E08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX306064 ID=CX306064; Name=CX306064; organism=Citrus clementina; type=EST; length=435bp
TTTTTTTTTTTTTTTTTTTTTTTGAAGGGATAAAAAAAGGAAACTTTTAT
TACATAACTGTAGTGCCCATGAGCACTTCTTGATACTTCATCAGAAGTTT
TATTTTATTTATGAACTAAGTATATAGAGGGATAATTAATTAATAAATTA
ACCCTATTACAGCATTAAGCTTCGATCGATCATGGAATTATAGATGGTGC
TTTAATCATTGCAGTTCACAAACTCGTAGCTGACAGTAAGGAAGCCTTGT
TGATAGCCTATTCCATTGGTGTCCAATTTCTTGAACACTCCTTCGTCCAA
ATCTAAGCCTCCATTGGCACACTGATCAACAATTCTCACAATTTGTTGGG
CTCCTGTACCACTGTTTGTGACCCTTAAGCACCTGCCACAAGCAGCTTGT
CCAATGGGTCCGCCCGAATGACAGAAAGCAGTCCA
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