CX306066
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX306066 vs. ExPASy Swiss-Prot
Match: CHI9_ORYSJ (Chitinase 9 OS=Oryza sativa subsp. japonica GN=Cht9 PE=2 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 5.817e-46 Identity = 89/170 (52.35%), Postives = 110/170 (64.71%), Query Frame = -2 Query: 9 AGNCGS---GVVCPGGECCSRFGWCGLTTDYCCEGCQSNCNQVVCGECDPDDGTAGDGGELG-----KIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPC 488 A CGS G +CP CCS +GWCG T+DYC +GCQS C+ CG G G GG G ++S+++FE LL +RND CPAR FYTYDA + AA AFP F +G++ RKRE+AAF QT HETTGGW AP G Y+WGYCF E+GA +S YC P+ +PC Sbjct: 23 AEQCGSQAGGALCPNCLCCSSYGWCGSTSDYCGDGCQSQCDG--CGGGGGGGGGGGGGGGGGGGAVEAVVSKELFEQLLLHRNDAACPARGFYTYDALVTAAAAFPDFAATGDDEARKREVAAFLGQTSHETTGGWATAPDGPYSWGYCFKEEIGATAS-YCVPSAEWPC 189
BLAST of CX306066 vs. ExPASy Swiss-Prot
Match: CHI4_SOLTU (Endochitinase 4 (Fragment) OS=Solanum tuberosum GN=CHTB4 PE=2 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 7.597e-46 Identity = 91/176 (51.70%), Postives = 110/176 (62.50%), Query Frame = -2 Query: 9 FSLVLSFVLGGSAGNCGSGVVCPGGECCSRFGWCGLTTDYCCEG-CQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARC-FYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPC 524 FSL+L G G C G CCS FGWCG T DYC G CQS C + P G GG++G +IS MF+ +L++RND C + FY+Y+AFI AA++F FG +G+ T RKREIAAFFAQT HETTGGWP AP G YAWGYCF RE G + DYC P+ +PC Sbjct: 9 FSLLLLTASAEQCGKQAGGARCAAGLCCSNFGWCGNTNDYCGPGKCQSQCPSGPSPK-PPTPGPGPSGGDIGSVISNSMFDQMLKHRNDNACQGKNNFYSYNAFINAARSFGGFGTTGDTTARKREIAAFFAQTSHETTGGWPTAPDGPYAWGYCFLREQG-SPGDYCTPSGQWPC 182
BLAST of CX306066 vs. ExPASy Swiss-Prot
Match: CHIC_SOLLC (Basic 30 kDa endochitinase OS=Solanum lycopersicum GN=CHI9 PE=1 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 3.770e-45 Identity = 92/179 (51.40%), Postives = 111/179 (62.01%), Query Frame = -2 Query: 9 FSLVLSFVLGGSAGNCGS---GVVCPGGECCSRFGWCGLTTDYCCEG-CQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARC-FYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPC 524 F L +L SA CGS G +C G CCS+FGWCG T +YC G CQS C G G G+LG +IS MF+ +L +RND C + FY+Y+AF+ AA +FP FG +G+ T RKREIAAF AQT HETTGGWP AP G YAWGYCF RE G + DYC P+ +PC Sbjct: 10 FLLFSVLLLSASAEQCGSQAGGALCASGLCCSKFGWCGNTNEYCGPGNCQSQC-----------PGGPGPSGDLGGVISNSMFDQMLNHRNDNACQGKNNFYSYNAFVTAAGSFPGFGTTGDITARKREIAAFLAQTSHETTGGWPTAPDGPYAWGYCFLREQG-SPGDYCTPSSQWPC 176
BLAST of CX306066 vs. ExPASy Swiss-Prot
Match: CHIX_PEA (Endochitinase OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 4.924e-45 Identity = 86/173 (49.71%), Postives = 109/173 (63.01%), Query Frame = -2 Query: 9 VLSFVLGGSAGNCGS---GVVCPGGECCSRFGWCGLTTDYCCEGCQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDP-NYPC 515 +L LG A CGS G VCP G CCS+FG+CG T YC +GCQS C P T G G++G+++ +F+ +L+YRND RC FYTYDAFI AA++F FG +G++ +K+E+AAF AQT HETTGGWP AP G YAWGYCF E YC P ++PC Sbjct: 14 LLPLFLGSKAEQCGSQAGGAVCPNGLCCSKFGFCGSTDPYCGDGCQSQCKSSPTPTI-PTPSTGG--GDVGRLVPSSLFDQMLKYRNDGRCAGHGFYTYDAFIAAARSFNGFGTTGDDNTKKKELAAFLAQTSHETTGGWPTAPDGPYAWGYCFVSEQN-TQEVYCSPKDWPC 182
BLAST of CX306066 vs. ExPASy Swiss-Prot
Match: CHI2_SOLTU (Endochitinase 2 (Fragment) OS=Solanum tuberosum GN=CHTB2 PE=2 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 4.924e-45 Identity = 93/179 (51.96%), Postives = 110/179 (61.45%), Query Frame = -2 Query: 9 FSLVLSFVLGGSAGNCGS---GVVCPGGECCSRFGWCGLTTDYCCEG-CQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARC-FYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPC 524 F L +L SA CGS G +C G CCS+FGWCG T DYC G CQS C G G+LG +IS MF+ +L +RND C + FY+Y+AFI AA +FP FG +G+ T RKREIAAFFAQT HETTGGW AP G YAWGYCF RE G + DYC P+ +PC Sbjct: 6 FLLFSVLLLSASAEQCGSQAGGALCASGLCCSKFGWCGNTNDYCGPGNCQSQC-------------PGGSPGDLGGVISNSMFDQMLNHRNDNACQGKGNFYSYNAFISAAGSFPGFGTTGDITARKREIAAFFAQTSHETTGGWASAPDGPYAWGYCFLREQG-SPGDYCTPSNQWPC 170
BLAST of CX306066 vs. ExPASy Swiss-Prot
Match: CHI3_ORYSJ (Chitinase 3 OS=Oryza sativa subsp. japonica GN=Cht3 PE=2 SV=2) HSP 1 Score: 179.104 bits (453), Expect = 1.097e-44 Identity = 82/169 (48.52%), Postives = 106/169 (62.72%), Query Frame = -2 Query: 9 VLGGSAGNCGSGVVCPGGECCSRFGWCGLTTDYCCEGCQSNCNQVVCGECD--PDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCD--PNYPC 503 V G G+ G +CP CCS++GWCG T+DYC GCQS C+ G C P ++G G + IIS +F+ +L +RND+ C A+ FYTYDAF+ AA A+P F +G+ KRE+AAF AQT HETTGGWP AP G Y+WGYCF E + YC+ P +PC Sbjct: 16 VRGEQCGSQAGGALCPNCLCCSQYGWCGSTSDYCGAGCQSQCS----GGCGGGPTPPSSGGGSGVASIISPSLFDQMLLHRNDQACAAKGFYTYDAFVAAANAYPDFATTGDADTCKREVAAFLAQTSHETTGGWPTAPDGPYSWGYCFKEENNGNAPTYCEPKPEWPC 180
BLAST of CX306066 vs. ExPASy Swiss-Prot
Match: CHI3_TOBAC (Endochitinase 3 OS=Nicotiana tabacum GN=CHN14 PE=3 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 1.433e-44 Identity = 92/177 (51.98%), Postives = 108/177 (61.02%), Query Frame = -2 Query: 9 LVLSFVLGGSAGNCGS---GVVCPGGECCSRFGWCGLTTDYCCEG-CQSNCNQVVCGECDPDDGTAGDG-GELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYC--DPNYPC 518 LVL +L SA CG G CP G CCS FGWCG T DYC G CQS C P T G G++ IIS MF+ +L++RND C + FYTY+AFI AA++F FG +G+ T RKRE+AAFFAQT HETTGGW AP G YAWGYC+ RE G S YC +PC Sbjct: 13 LVLFLLLAVSAEQCGKQAGGARCPSGMCCSNFGWCGNTQDYCGPGKCQSQCPSGPGPTPRPPTPTPGPSTGDISNIISSSMFDQMLKHRNDNTCQGKSFYTYNAFITAARSFRGFGTTGDTTRRKREVAAFFAQTSHETTGGWDTAPDGRYAWGYCYLREQGNPPS-YCVQSSQWPC 188
BLAST of CX306066 vs. ExPASy Swiss-Prot
Match: CHI1_HORVU (26 kDa endochitinase 1 OS=Hordeum vulgare PE=2 SV=4) HSP 1 Score: 177.948 bits (450), Expect = 2.444e-44 Identity = 90/177 (50.85%), Postives = 111/177 (62.71%), Query Frame = -2 Query: 9 FSLVLSFVLGGSAGNCGS---GVVCPGGECCSRFGWCGLTTDYCCEGCQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPC 524 F++V A CGS G CP CCSRFGWCG +T YC +GCQS C+ G P T GG + I+SR +F+ +L +RND C A+ FYTYDAF+ AA AF FG +G RKRE+AAF AQT HETTGGW AP G +AWGYCF +E G A+S+YC P+ +PC Sbjct: 7 FAVVAMAATMAVAEQCGSQAGGATCPNCLCCSRFGWCG-STPYCGDGCQSQCSGCGGGST-PVTPTPSGGGGVSSIVSRALFDRMLLHRNDGACQAKGFYTYDAFVAAASAFRGFGTTGGTDTRKREVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERG-ATSNYCTPSAQWPC 180
BLAST of CX306066 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSJ (Chitinase 7 OS=Oryza sativa subsp. japonica GN=Cht7 PE=2 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 1.875e-36 Identity = 81/168 (48.21%), Postives = 100/168 (59.52%), Query Frame = -2 Query: 9 GNCGSGVVCPGGECCSRFGWCGLTTDYCCEGCQSNCNQVVCGECDPDDG-----TAGDGGELG--KIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPC 485 G G CP CCSR+GWCGLT DYC GCQS C V + DD TA GG G +++ FE +L +R+D CPAR FY Y AF+ AA AFPAF +G+ RKRE+AAF AQT H T+ GG Y+WGYC+ +EV A+SD+C PN +PC Sbjct: 36 GRQAGGARCPNRLCCSRWGWCGLTDDYCKGGCQSQCR--VSRDGGDDDVAAVLLTAPGGGRAGVASVVTSDQFERMLPHRDDAACPARGFYAYRAFVAAAGAFPAFAATGDADTRKREVAAFLAQTSHATS-------GGPYSWGYCY-KEVKGATSDFCVPNARWPC 193
BLAST of CX306066 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSI (Chitinase 7 OS=Oryza sativa subsp. indica GN=Cht7 PE=2 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 1.875e-36 Identity = 81/168 (48.21%), Postives = 100/168 (59.52%), Query Frame = -2 Query: 9 GNCGSGVVCPGGECCSRFGWCGLTTDYCCEGCQSNCNQVVCGECDPDDG-----TAGDGGELG--KIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPC 485 G G CP CCSR+GWCGLT DYC GCQS C V + DD TA GG G +++ FE +L +R+D CPAR FY Y AF+ AA AFPAF +G+ RKRE+AAF AQT H T+ GG Y+WGYC+ +EV A+SD+C PN +PC Sbjct: 36 GRQAGGARCPNRLCCSRWGWCGLTDDYCKGGCQSQCR--VSRDGGDDDVAAVLLTAPGGGRAGVASVVTSDQFERMLPHRDDAACPARGFYAYRAFVAAAGAFPAFAATGDADTRKREVAAFLAQTSHATS-------GGPYSWGYCY-KEVKGATSDFCVPNARWPC 193 The following BLAST results are available for this feature:
BLAST of CX306066 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >CX306066 ID=CX306066; Name=CX306066; organism=Citrus clementina; type=EST; length=525bpback to top |