CX306066
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX306066 vs. ExPASy Swiss-Prot
Match: CHIA_SOLCI (Acidic endochitinase pcht28 OS=Solanum chilense PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 1.821e-23 Identity = 49/95 (51.58%), Postives = 66/95 (69.47%), Query Frame = -2 Query: 30 GKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDY 314 G I++R++FE +L +RN+ CPA+ FYTYDAFI AA +FP FG +G++T RK+EIAAFF QT HET GG G + GYCF R++ + Y Sbjct: 28 GSIVTRELFEQMLSFRNNDACPAKGFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETKGG----SAGTFTGGYCFVRQIDQSDRYY 118
BLAST of CX306066 vs. ExPASy Swiss-Prot
Match: CHIA_SOLLC (Acidic 26 kDa endochitinase OS=Solanum lycopersicum GN=CHI3 PE=1 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 4.056e-23 Identity = 48/95 (50.53%), Postives = 66/95 (69.47%), Query Frame = -2 Query: 30 GKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDY 314 G I++R++FE +L +RN+ CPA+ FYTYDAFI AA +FP FG +G++T RK+EIAAFF QT HET GG G + GYCF +++ + Y Sbjct: 28 GSIVTRELFEQMLSFRNNDACPAKGFYTYDAFIAAANSFPGFGTAGDDTARKKEIAAFFGQTSHETNGG----SAGTFTGGYCFVKQIEQSDRYY 118
BLAST of CX306066 vs. ExPASy Swiss-Prot
Match: CHIP_TOBAC (Acidic endochitinase P OS=Nicotiana tabacum PE=1 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.013e-22 Identity = 49/88 (55.68%), Postives = 63/88 (71.59%), Query Frame = -2 Query: 54 LGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNRE 317 +G I++ +F ++L+ RND RCPA FYTYDAFI AA +FP FG SG++T R++EIAAFF QT HETTGG A + GYCF R+ Sbjct: 27 IGSIVTNDLFNEMLKNRNDGRCPANGFYTYDAFIAAANSFPGFGTSGDDTARRKEIAAFFGQTSHETTGGSLSAE--PFTGGYCFVRQ 112
BLAST of CX306066 vs. ExPASy Swiss-Prot
Match: CHI8_ORYSJ (Chitinase 8 OS=Oryza sativa subsp. japonica GN=Cht8 PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 2.629e-22 Identity = 55/114 (48.25%), Postives = 72/114 (63.16%), Query Frame = -2 Query: 3 GTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNET-MRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPNYPCRG 341 G A G +G +I++ +F +L R++ +CPAR FYTYDAFI AA +FPAFG SG + +RE+AAFF QT HETTGG ++ WGYCF E+ A+S P Y RG Sbjct: 26 GAAAQG--VGSVITQAVFNSMLPNRDNSQCPARGFYTYDAFIAAANSFPAFGTSGGSAELIRRELAAFFGQTSHETTGG-TRGSSDQFQWGYCFKEEINKATS----PPYYGRG 132
BLAST of CX306066 vs. ExPASy Swiss-Prot
Match: CHIQ_TOBAC (Acidic endochitinase Q OS=Nicotiana tabacum PE=1 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 5.857e-22 Identity = 48/88 (54.55%), Postives = 63/88 (71.59%), Query Frame = -2 Query: 54 LGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNRE 317 +G I++ +F ++L+ RND RCPA FYTYDAFI AA +FP FG +G++T R++EIAAFF QT HETTGG A + GYCF R+ Sbjct: 27 IGSIVTSDLFNEMLKNRNDGRCPANGFYTYDAFIAAANSFPGFGTTGDDTARRKEIAAFFGQTSHETTGGSLSAE--PFTGGYCFVRQ 112
BLAST of CX306066 vs. ExPASy Swiss-Prot
Match: AGI_URTDI (Lectin/endochitinase 1 OS=Urtica dioica GN=UDA1 PE=1 SV=3) HSP 1 Score: 102.834 bits (255), Expect = 9.991e-22 Identity = 56/162 (34.57%), Postives = 81/162 (50.00%), Query Frame = -2 Query: 9 CGSGV---VCPGGECCSRFGWCGLTTDYCCEG-CQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYC-DPNYPC 479 CG+ V C CCS GWCG DYC CQ C+ V G G + +++ +F+ + +R D CP++ FY+Y +F+ AA++FPAFG G+ RKRE+AAF A T+G D +AWG C +D+C ++PC Sbjct: 72 CGAAVGNPPCGQDRCCSVHGWCGGGNDYCSGSKCQYRCSSSVRGPRVALSGNSTANSIGNVVVTEPLFDQMFSHRKD--CPSQGFYSYHSFLVAAESFPAFGTIGDVATRKREVAAFLAHISQATSGERSDVE-NPHAWGLCHINTTTVTENDFCTSSDWPC 230
BLAST of CX306066 vs. ExPASy Swiss-Prot
Match: CHIB_MAIZE (Endochitinase B (Fragment) OS=Zea mays PE=1 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 8.458e-21 Identity = 56/164 (34.15%), Postives = 80/164 (48.78%), Query Frame = -2 Query: 9 SAGNCGSGVVCPGGECCSRFGWCGLTTDYCCEGCQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDP---NYPC 491 +A NCG C CCS+FG+CG T +YC +GCQS C G+ G G + +++ F + + + C + FYT AF+ A K +P F + G++ KREIAAFFA HET +C+ E+ S+ YCDP +PC Sbjct: 19 AAQNCG----CQPNVCCSKFGYCGTTDEYCGDGCQSG----PCRSGRGGGGSGGGGANVASVVTSSFFNGI-KNQAGSGCEGKNFYTRSAFLSAVKGYPGFAHGGSQVQGKREIAAFFAHATHET-------------GHFCYISEIN-KSNAYCDPTKRQWPC 159
BLAST of CX306066 vs. ExPASy Swiss-Prot
Match: CHI4_BRANA (Basic endochitinase CHB4 OS=Brassica napus PE=1 SV=2) HSP 1 Score: 98.5969 bits (244), Expect = 1.884e-20 Identity = 61/163 (37.42%), Postives = 77/163 (47.24%), Query Frame = -2 Query: 9 NCGSGVVCPGGECCSRFGWCGLTTDYCCEGCQSNCNQVVCGECDPDDGTAG--DGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN---YPC 482 NCG C CCS+FG+CG T YC GC+S G C GT GG +G I+++ F ++ C + FYT D+FI AA FP F NS + +REIA FA HET +C+ E+ AS DYCD N YPC Sbjct: 26 NCG----CAPNLCCSQFGYCGSTDAYCGTGCRS-------GPCRSPGGTPSPPGGGSVGSIVTQAFFNGIINQAGG-GCAGKNFYTRDSFINAANTFPNFANS----VTRREIATMFAHFTHET-------------GHFCYIEEINGASRDYCDENNRQYPC 159
BLAST of CX306066 vs. ExPASy Swiss-Prot
Match: CHI6_ORYSJ (Chitinase 6 OS=Oryza sativa subsp. japonica GN=Cht6 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 2.461e-20 Identity = 57/164 (34.76%), Postives = 83/164 (50.61%), Query Frame = -2 Query: 9 SAGNCGSGVVCPGGECCSRFGWCGLTTDYCCEGCQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCD---PNYPC 491 +A +CG C +CCS++G+CG +DYC GCQ+ P D A + + I++ + F L+ +D C A+ FYT DAF+ AA +P+FG +G+ KREIAAFFA HET +C+ E+ S +YCD +PC Sbjct: 24 AAQSCG----CASDQCCSKWGFCGTGSDYCGTGCQAG----------PCDVPATNDVSVASIVTPEFFAALVAQADDG-CAAKGFYTRDAFLTAAGGYPSFGRTGSVDDSKREIAAFFAHANHETI-------------KFCYIEEIDGPSKNYCDETSTQWPC 159
BLAST of CX306066 vs. ExPASy Swiss-Prot
Match: CHI4_ORYSJ (Chitinase 4 OS=Oryza sativa subsp. japonica GN=Cht4 PE=2 SV=2) HSP 1 Score: 94.7449 bits (234), Expect = 2.721e-19 Identity = 59/180 (32.78%), Postives = 86/180 (47.78%), Query Frame = -2 Query: 6 SLVLSFVLGGSAGNCGSGVVCPGGECCSRFGWCGLTTDYCCEGCQSN-C----NQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN---YPCR 521 +L+LS +A NCG C G CCS++G+CG T YC +GCQS C + G G AG G + +++ F + + + C + FYT +F+ AA+++ F N KREIAAFFA HET C+ E+ A+ DYCD + +PC+ Sbjct: 16 ALLLSAAAPAAAQNCG----CQDGYCCSQWGYCGTTEAYCGQGCQSGPCWGSGGEAAAGMAGRKAG-AGAGVSVESVVTEAFFNGI-KNQAPNGCAGKSFYTRQSFLNAARSYSGFANDRTNDDSKREIAAFFAHVTHET-------------GHMCYINEINGANMDYCDKSNKQWPCQ 176 The following BLAST results are available for this feature:
BLAST of CX306066 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >CX306066 ID=CX306066; Name=CX306066; organism=Citrus clementina; type=EST; length=525bpback to top |