CX306066
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX306066 vs. ExPASy Swiss-Prot
Match: CHIT_AVESA (Endochitinase (Fragments) OS=Avena sativa PE=1 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 7.916e-19 Identity = 45/82 (54.88%), Postives = 55/82 (67.07%), Query Frame = -2 Query: 72 LGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWG 317 + +IS +FE +L +R FYTYDAFI AAK+FPAF +G+ +RKRE+AAF AQT HETTGGWP AP G Y G Sbjct: 1 VSSVISSSLFEKMLLHRG--------FYTYDAFIAAAKSFPAFATTGSTDVRKREVAAFLAQTSHETTGGWPTAPDGPYELG 74
BLAST of CX306066 vs. ExPASy Swiss-Prot
Match: CHIA_MAIZE (Endochitinase A OS=Zea mays PE=1 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 1.350e-18 Identity = 58/165 (35.15%), Postives = 77/165 (46.67%), Query Frame = -2 Query: 9 SAGNCGSGVVCPGGECCSRFGWCGLTTDYCCEGCQSN-CNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN---YPC 491 +A NCG C CCS+FG+CG T YC +GCQS C G G G GG + F + ++ + C + FYT AF+ A A+P F + G E KREIAAFFA HET +C+ E+ S+ YCD + +PC Sbjct: 24 AAQNCG----CQPNFCCSKFGYCGTTDAYCGDGCQSGPCRSGGGGGGGGGGGGGGSGGANVANVVTDAFFNGIKNQAGSGCEGKNFYTRSAFLSAVNAYPGFAHGGTEVEGKREIAAFFAHVTHET-------------GHFCYISEIN-KSNAYCDASNRQWPC 170
BLAST of CX306066 vs. ExPASy Swiss-Prot
Match: CHI5_ORYSJ (Chitinase 5 OS=Oryza sativa subsp. japonica GN=Cht5 PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 1.764e-18 Identity = 60/179 (33.52%), Postives = 83/179 (46.37%), Query Frame = -2 Query: 6 SLVLSFVLGGSAGNCGSGVVCPGGECCSRFGWCGLTTDYCCEGCQSN-CNQVVCGECDPDDGTAGDGGELG---KIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN---YPCR 521 +L+LS SA NCG C CCS++G+CG DYC +GC+S C G G G GG G + + + F + ++ + C + FYT +F+ AA ++ F KREIAAFFA HET C+ E+ AS DYCD N +PC+ Sbjct: 18 ALLLSATGQASAQNCG----CQSNMCCSKWGYCGTGKDYCGDGCRSGPCYGGGGGGGGGGGGGGGGGGGSGVSVESVVTEAFFNGIKNQAPNGCAGKNFYTRQSFLNAAHSYSGFARDRTNDDSKREIAAFFAHVTHET-------------GHMCYINEINGASMDYCDKNNKQWPCQ 179
BLAST of CX306066 vs. ExPASy Swiss-Prot
Match: CHI4_PHAVU (Endochitinase PR4 OS=Phaseolus vulgaris GN=CHI4 PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 2.303e-18 Identity = 58/165 (35.15%), Postives = 76/165 (46.06%), Query Frame = -2 Query: 9 SAGNCGSGVVCPGGECCSRFGWCGLTTDYCCEGCQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCD----PNYPC 491 SA NCG C G CCS++G+CG DYC GCQ Q C P + I++ +++ + D C + FYT DAF+ A ++ FG G+E KREIAA FA HET +C+ E+ AS DYCD YPC Sbjct: 22 SAQNCG----CAEGLCCSQYGYCGTGEDYCGTGCQ----QGPCTTASPPPSNNVNAD----ILTADFLNGIID-QADSGCAGKNFYTRDAFLSALNSYTDFGRVGSEDDSKREIAAAFAHFTHET-------------GHFCYIEEIDGASKDYCDEESIAQYPC 160
BLAST of CX306066 vs. ExPASy Swiss-Prot
Match: CHIP_BETVU (Acidic endochitinase SP2 OS=Beta vulgaris GN=SP2 PE=1 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 2.547e-17 Identity = 65/186 (34.95%), Postives = 79/186 (42.47%), Query Frame = -2 Query: 9 SLVLSFVLGGSAGNCGSGVVCPGGECCSRFGWCGLTTDYCCEGCQSNCNQVVCGECDPDD----------GTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNRE-VGAASSDYCDPN----YPC 521 S++ SF A NCG C CCS FG+CG T YC G NC C P GT G G + I+S+ F+ ++ + CP + FYT AF+ A P FGN G+ KREIAAFFA HETT C E G YCD + YPC Sbjct: 16 SVISSFPTSLFAQNCG----CAPNLCCSNFGFCGTGTPYCGVG---NCQSGPCEGGTPTTPTTPTTPTTPGTGGGGSSVSDIVSQAFFDGIIG-QAAASCPGKNFYTRAAFLSAVD--PKFGNEGSSDDNKREIAAFFAHISHETT-------------NLCHIEERDGDVGDAYCDQDKAAQYPC 178
BLAST of CX306066 vs. ExPASy Swiss-Prot
Match: CHIT_DIOJA (Acidic endochitinase OS=Dioscorea japonica PE=1 SV=2) HSP 1 Score: 83.9593 bits (206), Expect = 4.803e-16 Identity = 53/149 (35.57%), Postives = 71/149 (47.65%), Query Frame = -2 Query: 9 CCSRFGWCGLTTDYCCEGCQSNCNQVVCGEC-DPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPC 446 CCS+ G+CG + DYC GCQ+ G C DP +G DG I + F D + + CP + FYT F+EA A+P FG + RKREIAA+FA HET C+ E +++YC + YPC Sbjct: 11 CCSQHGYCGNSYDYCGPGCQA-------GPCWDPCEG---DGTLTVSDIVTQEFWDGIASQAAANCPGKSFYTRSNFLEAVSAYPGFGTKCTDEDRKREIAAYFAHVTHET-------------GHLCYIEERDGHANNYCQESQQYPC 136 The following BLAST results are available for this feature:
BLAST of CX306066 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >CX306066 ID=CX306066; Name=CX306066; organism=Citrus clementina; type=EST; length=525bpback to top |