CX306095

Overview
NameCX306095
Unique NameCX306095
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length375
Libraries
Library NameType
Drought1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX306095 vs. ExPASy Swiss-Prot
Match: CTPAL_STAAC (Probable ctpA-like serine protease OS=Staphylococcus aureus (strain COL) GN=SACOL1455 PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 9.315e-14
Identity = 41/77 (53.25%), Postives = 49/77 (63.64%), Query Frame = 3
Query:  132 VLVNEGSASASEILAGALHDNGRAILVGHKTFGKGKIQSVTESHDGSALFVTVAKYLSPALHDIDQVGITPDVQCTT 362
            +LVNEGSASASE+  GAL D  +A + G KTFGKG +Q+  E  DGS L  T  K+L+P  H I   GI PDV   T
Sbjct:  321 ILVNEGSASASEVFTGALKDYNKAKVYGSKTFGKGVVQTTREFKDGSLLKYTEMKWLTPDGHYIHGKGIKPDVTIDT 397          
BLAST of CX306095 vs. ExPASy Swiss-Prot
Match: CTPAL_STAAB (Probable ctpA-like serine protease OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=SAB1275c PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 9.315e-14
Identity = 41/77 (53.25%), Postives = 49/77 (63.64%), Query Frame = 3
Query:  132 VLVNEGSASASEILAGALHDNGRAILVGHKTFGKGKIQSVTESHDGSALFVTVAKYLSPALHDIDQVGITPDVQCTT 362
            +LVNEGSASASE+  GAL D  +A + G KTFGKG +Q+  E  DGS L  T  K+L+P  H I   GI PDV   T
Sbjct:  321 ILVNEGSASASEVFTGALKDYNKAKVYGSKTFGKGVVQTTREFKDGSLLKYTEMKWLTPDGHYIHGKGIKPDVTIDT 397          
BLAST of CX306095 vs. ExPASy Swiss-Prot
Match: CTPAL_STAEQ (Probable ctpA-like serine protease OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=SERP0996 PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.217e-13
Identity = 39/77 (50.65%), Postives = 51/77 (66.23%), Query Frame = 3
Query:  132 VLVNEGSASASEILAGALHDNGRAILVGHKTFGKGKIQSVTESHDGSALFVTVAKYLSPALHDIDQVGITPDVQCTT 362
            +LVNEGSASASE+  GA+ D  +A + G KTFGKG +Q++ E  DGS +  T  K+L+P  H I   GI PDV  +T
Sbjct:  316 ILVNEGSASASEVFTGAMKDYHKAKVYGSKTFGKGIVQTIREFSDGSLIKYTEMKWLTPDGHYIHGKGIRPDVSIST 392          
BLAST of CX306095 vs. ExPASy Swiss-Prot
Match: CTPA_BACSU (Carboxy-terminal processing protease ctpA OS=Bacillus subtilis GN=ctpA PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.589e-13
Identity = 38/77 (49.35%), Postives = 53/77 (68.83%), Query Frame = 3
Query:  123 PLVVLVNEGSASASEILAGALHDNGRAILVGHKTFGKGKIQSVTESHDGSALFVTVAKYLSPALHDIDQVGITPDVQ 353
            P VVLVN+G+ASA+EI+A ALH++    L+G  TFGKG +Q+  E  DGS + +TVAK+L+     I + GI P V+
Sbjct:  286 PTVVLVNDGTASAAEIMAAALHESSNVPLIGETTFGKGTVQTAKEYDDGSTVKLTVAKWLTADGEWIHKKGIKPQVK 362          
BLAST of CX306095 vs. ExPASy Swiss-Prot
Match: CTPAL_STAES (Probable ctpA-like serine protease OS=Staphylococcus epidermidis (strain ATCC 12228) GN=SE_1113 PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.710e-13
Identity = 39/77 (50.65%), Postives = 50/77 (64.94%), Query Frame = 3
Query:  132 VLVNEGSASASEILAGALHDNGRAILVGHKTFGKGKIQSVTESHDGSALFVTVAKYLSPALHDIDQVGITPDVQCTT 362
            +LVNEGSASASE+  GA+ D  +A + G KTFGKG +Q+  E  DGS +  T  K+L+P  H I   GI PDV  +T
Sbjct:  316 ILVNEGSASASEVFTGAMKDYHKAKVYGSKTFGKGIVQTTREFSDGSLIKYTEMKWLTPDGHYIHGKGIRPDVSIST 392          
The following BLAST results are available for this feature:
BLAST of CX306095 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
CTPAL_STAAC9.315e-1453.25Probable ctpA-like serine protease OS=Staphylococc... [more]
CTPAL_STAAB9.315e-1453.25Probable ctpA-like serine protease OS=Staphylococc... [more]
CTPAL_STAEQ1.217e-1350.65Probable ctpA-like serine protease OS=Staphylococc... [more]
CTPA_BACSU1.589e-1349.35Carboxy-terminal processing protease ctpA OS=Bacil... [more]
CTPAL_STAES2.710e-1350.65Probable ctpA-like serine protease OS=Staphylococc... [more]

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Properties
Property NameValue
Genbank descriptionC18013H07Rv Drought1 Citrus clementina cDNA clone C18013H07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX306095 ID=CX306095; Name=CX306095; organism=Citrus clementina; type=EST; length=375bp
GCGGGGGACTTGATGTTGCCCAAATATGGCTAGATGGAGACGAGACTCTT
GTGAACGCAGTTGACAGGGAAGGACATACGTTACCTATTAACATGGTCGA
TGGGCATGCCATAACTCATGATCCACTGGTGGTCCTTGTCAATGAGGGAA
GTGCGAGTGCGAGTGAGATTTTAGCGGGGGCATTGCATGATAATGGTCGT
GCCATCCTTGTGGGGCACAAAACCTTTGGCAAAGGCAAAATTCAGAGTGT
CACAGAGTCGCACGATGGATCAGCTCTGTTTGTCACGGTGGCAAAGTATC
TATCACCTGCACTTCACGACATAGATCAGGTTGGCATAACGCCTGATGTG
CAGTGCACAACAGACATGCTGAGCT
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