CX306158
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX306158 vs. ExPASy Swiss-Prot
Match: DCAM_ORYSJ (S-adenosylmethionine decarboxylase proenzyme OS=Oryza sativa subsp. japonica GN=SAMDC PE=2 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 7.403e-27 Identity = 57/85 (67.06%), Postives = 69/85 (81.18%), Query Frame = 3 Query: 21 EMCMTGLDRKRASVFYKTNE----SSAAMMTEDSGIRKILPKSEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVG 263 EMCMTGLD+++ASVF+KT+ S A MT+ SGI I+P+ EICDF+F+PCGYSMN+I G A STIHVTPEDGFSYAS+E VG Sbjct: 188 EMCMTGLDKEKASVFFKTSADGHTSCAKEMTKLSGISDIIPEMEICDFDFEPCGYSMNAIHGSAFSTIHVTPEDGFSYASYEVVG 272
BLAST of CX306158 vs. ExPASy Swiss-Prot
Match: DCAM_MAIZE (S-adenosylmethionine decarboxylase proenzyme OS=Zea mays GN=SAMDC PE=2 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 7.403e-27 Identity = 56/85 (65.88%), Postives = 68/85 (80.00%), Query Frame = 3 Query: 21 EMCMTGLDRKRASVFYKTNESS----AAMMTEDSGIRKILPKSEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVG 263 EMCMTGLD+K+A VF+KTN A MT+ SGI +I+P+ EICDF+F+PCGYSMN+I G A STIHVTPEDGFSYAS+E +G Sbjct: 188 EMCMTGLDKKKACVFFKTNADGNTTCAKEMTKLSGISEIIPEMEICDFDFEPCGYSMNAIHGSAFSTIHVTPEDGFSYASYEVMG 272
BLAST of CX306158 vs. ExPASy Swiss-Prot
Match: DCAM_ORYSI (S-adenosylmethionine decarboxylase proenzyme OS=Oryza sativa subsp. indica GN=SAMDC PE=2 SV=2) HSP 1 Score: 117.472 bits (293), Expect = 2.154e-26 Identity = 57/85 (67.06%), Postives = 69/85 (81.18%), Query Frame = 3 Query: 21 EMCMTGLDRKRASVFYKTNE----SSAAMMTEDSGIRKILPKSEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVG 263 EMCMTGLD+++ASVF+KT+ S A MT+ SGI I+P+ EICDF+F+PCGYSMN+I G A STIHVTPEDGFSYAS+E VG Sbjct: 188 EMCMTGLDKEKASVFFKTSADGHTSCAKEMTKLSGISDIIPEMEICDFDFEPCGYSMNAIHGLAFSTIHVTPEDGFSYASYEVVG 272
BLAST of CX306158 vs. ExPASy Swiss-Prot
Match: DCAM_HORCH (S-adenosylmethionine decarboxylase proenzyme OS=Hordeum chilense GN=SAMDC PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 8.185e-26 Identity = 55/85 (64.71%), Postives = 67/85 (78.82%), Query Frame = 3 Query: 21 EMCMTGLDRKRASVFYKTNE----SSAAMMTEDSGIRKILPKSEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVG 263 EMCMTGLD+ +ASVF+KT+ S A MT+ SGI I+P+ E+CDF+F+PCGYSMN+I G A STIHVTPEDGFSYAS+E G Sbjct: 181 EMCMTGLDKTKASVFFKTHADGHVSCAKEMTKLSGISDIIPEMEVCDFDFEPCGYSMNAINGSAFSTIHVTPEDGFSYASYEVQG 265
BLAST of CX306158 vs. ExPASy Swiss-Prot
Match: DCAM_DROME (S-adenosylmethionine decarboxylase proenzyme OS=Drosophila melanogaster GN=SamDC PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 3.226e-14 Identity = 44/93 (47.31%), Postives = 56/93 (60.22%), Query Frame = 3 Query: 21 EMCMTGLDRKRASVFYKTNESSAAMMTEDSGIRKILPKSEICDFEFDPCGYSMNSI-EGDAVSTIHVTPEDGFSYASFEAVGNISLRDIQFLL 296 E+ M LD + S+FYK + A T SGI ILP I DF FDPCGYSMN I + TIH+TPE+ FSY SFE N++L + + L+ Sbjct: 186 EILMQDLDPETMSIFYKNKFNDANGATVKSGIDTILPTMHIDDFLFDPCGYSMNGINDKGEYMTIHITPENQFSYVSFET--NVALSNYRKLI 276
BLAST of CX306158 vs. ExPASy Swiss-Prot
Match: DCAM_DICDI (S-adenosylmethionine decarboxylase proenzyme OS=Dictyostelium discoideum GN=amd1 PE=3 SV=3) HSP 1 Score: 74.3294 bits (181), Expect = 2.091e-13 Identity = 42/92 (45.65%), Postives = 53/92 (57.61%), Query Frame = 3 Query: 21 EMCMTGLDRKRASVFYKTNESSAAMMTEDSGIRKILPKSEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVGNISLRDIQFLL 296 E+ M LD F+K SA T +SGI +LP S I DF+FDPCGYSMN + + TIH+TPE SY SF+ N++L D LL Sbjct: 203 EVMMHDLDETVMKQFFKREGVSAWDTTVNSGIADLLPGSMIDDFQFDPCGYSMNGLLNEFYWTIHITPESHCSYVSFDT--NVALADYNQLL 292
BLAST of CX306158 vs. ExPASy Swiss-Prot
Match: KING1_ARATH (SNF1-related protein kinase regulatory subunit gamma 1 OS=Arabidopsis thaliana GN=KING1 PE=1 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 1.499e-11 Identity = 44/114 (38.60%), Postives = 62/114 (54.39%), Query Frame = 3 Query: 51 RASVFYKTNESSAAMMTEDSGIRK-------ILPKSEICD-FEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVGNISLRDIQFLLTTPEIYHDYRSITAKNFLTAVRKY 368 ++ V + E + + ED GI+ I+ K I +E +P + + + I V + S + VGNISLRD+QFLLT PEIYHDYRSIT KNFL +VR++ Sbjct: 231 QSGVIHMLAECAGLLWFEDWGIKTLSEVGLPIMSKDHIIKIYEDEPVLQAFKLMRRKRIGGIPVIERN-----SEKPVGNISLRDVQFLLTAPEIYHDYRSITTKNFLVSVREH 339
BLAST of CX306158 vs. ExPASy Swiss-Prot
Match: DCAM_HUMAN (S-adenosylmethionine decarboxylase proenzyme OS=Homo sapiens GN=AMD1 PE=1 SV=2) HSP 1 Score: 67.0106 bits (162), Expect = 3.338e-11 Identity = 36/79 (45.57%), Postives = 48/79 (60.76%), Query Frame = 3 Query: 21 EMCMTGLDRKRASVFYKTNESSAAMMTEDSGIRKILPKSEICDFEFDPCGYSMNSIEGDAVS-TIHVTPEDGFSYASFE 254 E+ M+ LD FY + +A +T +SGIR ++P S I F+PCGYSMN ++ D TIH+TPE FSY SFE Sbjct: 178 EILMSELDPAVMDQFYMKDGVTAKDVTRESGIRDLIPGSVIDATMFNPCGYSMNGMKSDGTYWTIHITPEPEFSYVSFE 256
BLAST of CX306158 vs. ExPASy Swiss-Prot
Match: DCAM_BOVIN (S-adenosylmethionine decarboxylase proenzyme OS=Bos taurus GN=AMD1 PE=1 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 3.338e-11 Identity = 36/79 (45.57%), Postives = 48/79 (60.76%), Query Frame = 3 Query: 21 EMCMTGLDRKRASVFYKTNESSAAMMTEDSGIRKILPKSEICDFEFDPCGYSMNSIEGDAVS-TIHVTPEDGFSYASFE 254 E+ M+ LD FY + +A +T +SGIR ++P S I F+PCGYSMN ++ D TIH+TPE FSY SFE Sbjct: 178 EILMSELDPAVMDQFYMKDGVTAKDVTRESGIRDLIPGSVIDATMFNPCGYSMNGMKSDGTYWTIHITPEPEFSYVSFE 256
BLAST of CX306158 vs. ExPASy Swiss-Prot
Match: DCAM_RAT (S-adenosylmethionine decarboxylase proenzyme OS=Rattus norvegicus GN=Amd1 PE=2 SV=3) HSP 1 Score: 66.6254 bits (161), Expect = 4.360e-11 Identity = 36/79 (45.57%), Postives = 48/79 (60.76%), Query Frame = 3 Query: 21 EMCMTGLDRKRASVFYKTNESSAAMMTEDSGIRKILPKSEICDFEFDPCGYSMNSIEGDAVS-TIHVTPEDGFSYASFE 254 E+ M+ LD FY + +A +T +SGIR ++P S I F+PCGYSMN ++ D TIH+TPE FSY SFE Sbjct: 178 EILMSELDPAVMDQFYMKDGVTAKDVTRESGIRDLIPGSVIDATLFNPCGYSMNGMKSDGTYWTIHITPEPEFSYVSFE 256 The following BLAST results are available for this feature:
BLAST of CX306158 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 34
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Sequences
The
following sequences are available for this feature:
EST sequence >CX306158 ID=CX306158; Name=CX306158; organism=Citrus clementina; type=EST; length=368bpback to top |