CX306168
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX306168 vs. ExPASy Swiss-Prot
Match: PSAL_GRATL (Photosystem I reaction center subunit XI OS=Gracilaria tenuistipitata var. liui GN=psaL PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 3.935e-24 Identity = 49/101 (48.51%), Postives = 71/101 (70.30%), Query Frame = 1 Query: 211 IQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIYGIASFNEGE 513 IQ N DPF+G+L TP+++S L+NLPAYR +SPLLRG+E+G+AHG+ LVGPF K GPLRNT++ ++IL++CL++YG SF++ + Sbjct: 5 IQSYNNDPFLGNLSTPVSTSTFTKGLLNNLPAYRRGLSPLLRGLEIGMAHGYFLVGPFDKLGPLRNTDVALLSGFLSAVGLIIILTVCLSMYGNVSFDKDD 105
BLAST of CX306168 vs. ExPASy Swiss-Prot
Match: PSAL_THAPS (Photosystem I reaction center subunit XI OS=Thalassiosira pseudonana GN=psaL PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 6.712e-24 Identity = 52/99 (52.53%), Postives = 69/99 (69.70%), Query Frame = 1 Query: 211 IQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIYGIASFNE 507 I+P N DPF+G L TPITSS L L NLPAYR ++PLLRG+E+GLAHG+ L+GPF + GPLRN++I ++IL++ LTIYG A+F + Sbjct: 5 IKPYNDDPFVGHLATPITSSSLTRALLKNLPAYRFGLTPLLRGLEIGLAHGYFLIGPFAQLGPLRNSDIGLLAGFLSTIGLILILTLGLTIYGAAAFGQ 103
BLAST of CX306168 vs. ExPASy Swiss-Prot
Match: PSAL_CYAP4 (Photosystem I reaction center subunit XI OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=psaL PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 6.712e-24 Identity = 48/108 (44.44%), Postives = 71/108 (65.74%), Query Frame = 1 Query: 205 QVIQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIYGIASFNEGEPSTAP 528 ++I+P NGDPF G L TPI+ S ++ NLPAYR +SP+LRG+E+G+AHG+ L+GP+VK GPLR++++ ++I + CL YGI SF + E + P Sbjct: 8 ELIKPYNGDPFTGHLSTPISDSDFTRTFIGNLPAYRKGLSPILRGLEIGMAHGYFLIGPWVKLGPLRDSDVANLGGLISGIALILIATACLAAYGIVSFQKEEAAANP 115
BLAST of CX306168 vs. ExPASy Swiss-Prot
Match: PSAL_CYAME (Photosystem I reaction center subunit XI OS=Cyanidioschyzon merolae GN=psaL PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 1.953e-23 Identity = 51/97 (52.58%), Postives = 65/97 (67.01%), Query Frame = 1 Query: 211 IQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIYGIASF 501 I+P N DPF+G L TPI SS L YLS LP YR VSP LRG+E+G+AHG+ L+GPFV+ GPLRNT+I +VIL++ + +YG SF Sbjct: 5 IKPYNNDPFVGHLATPINSSSLTRAYLSQLPIYRRGVSPFLRGLEIGMAHGYFLIGPFVQLGPLRNTDIKYLAGLLSAIGLIVILTLGMLLYGAVSF 101
BLAST of CX306168 vs. ExPASy Swiss-Prot
Match: PSAL_ISOGA (Photosystem I reaction center subunit XI OS=Isochrysis galbana GN=psaL PE=2 SV=2) HSP 1 Score: 108.227 bits (269), Expect = 2.550e-23 Identity = 47/101 (46.53%), Postives = 68/101 (67.33%), Query Frame = 1 Query: 205 QVIQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIYGIASFNE 507 + ++P N DPF+G+L TP+T+S YL NLP YR ++PLLRG+E+G+AHG+ L+GPF GPLRN+ ++IL++ LTIYG+ASF + Sbjct: 3 EFVKPFNNDPFVGNLSTPVTTSTATKLYLGNLPIYRKGLTPLLRGLEIGMAHGYFLIGPFYILGPLRNSPNALLVGLFSAFGLIIILTLALTIYGLASFQD 103
BLAST of CX306168 vs. ExPASy Swiss-Prot
Match: PSAL_PORPU (Photosystem I reaction center subunit XI OS=Porphyra purpurea GN=psaL PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 4.350e-23 Identity = 47/103 (45.63%), Postives = 68/103 (66.02%), Query Frame = 1 Query: 205 QVIQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIYGIASFNEGE 513 + I+P N DPF+G+L TP+++S L NLPAYR +SPLLRG+E+G+AHG+ L+GPF K GPLR T++ ++IL+ CL++YG SF + Sbjct: 3 EFIKPYNDDPFVGNLSTPVSTSSFSKGLLGNLPAYRRGLSPLLRGLEIGMAHGYFLIGPFDKLGPLRGTDVALLAGFLSSVGLIIILTTCLSMYGNVSFTRSD 105
BLAST of CX306168 vs. ExPASy Swiss-Prot
Match: PSAL_EMIHU (Photosystem I reaction center subunit XI OS=Emiliania huxleyi GN=psaL PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 7.420e-23 Identity = 49/103 (47.57%), Postives = 68/103 (66.02%), Query Frame = 1 Query: 205 QVIQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIYGIASFNEGE 513 + ++P N DPF+G+L TP+T+S YL NLP YR +SPLLRG+E+G+AHG+ L+GPF GPLRN+ ++IL++ LTIYG+ASF E Sbjct: 3 EFVKPYNNDPFVGNLSTPVTTSTATKLYLGNLPIYRKGLSPLLRGLEIGMAHGYFLIGPFYILGPLRNSPNALLVGLFSAFGLILILTLGLTIYGLASFQGTE 105
BLAST of CX306168 vs. ExPASy Swiss-Prot
Match: PSAL_TRIEI (Photosystem I reaction center subunit XI OS=Trichodesmium erythraeum (strain IMS101) GN=psaL PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.159e-22 Identity = 48/108 (44.44%), Postives = 67/108 (62.04%), Query Frame = 1 Query: 211 IQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIYGIASFNEGEPSTAPGL 534 +QP GDPF+G L TPI+ S ++ NLP YR +SP+LRG+EVG+AHG+ +VGP+ K GPLR++ + V+I +ICL+ YG+ SF P A L Sbjct: 10 VQPYKGDPFVGHLSTPISDSDFTRAFIGNLPIYRPGLSPILRGLEVGMAHGYFIVGPWTKLGPLRDSAVANLGGLISTIALVLIATICLSAYGLVSFQGKSPEGADPL 117
BLAST of CX306168 vs. ExPASy Swiss-Prot
Match: PSAL_PORYE (Photosystem I reaction center subunit XI OS=Porphyra yezoensis GN=psaL PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 3.683e-22 Identity = 46/103 (44.66%), Postives = 67/103 (65.05%), Query Frame = 1 Query: 205 QVIQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIYGIASFNEGE 513 + I+P N DPF+G+L TP+++S NLPAYR +SPLLRG+E+G+AHG+ L+GPF K GPLR T++ ++IL+ CL++YG SF + Sbjct: 3 EFIKPYNDDPFVGNLSTPVSTSSFSKGTSRNLPAYRRGLSPLLRGLEIGMAHGYFLIGPFDKLGPLRGTDVALLAGFLSSVGLIIILTTCLSMYGNVSFTRAD 105
BLAST of CX306168 vs. ExPASy Swiss-Prot
Match: PSAL_NOSP7 (Photosystem I reaction center subunit XI OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=psaL PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 6.945e-21 Identity = 49/122 (40.16%), Postives = 73/122 (59.84%), Query Frame = 1 Query: 175 KAIQSEKPTYQVIQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIYGIASFNEGEPSTAPGLTL 540 K + S+ +V+ P DP +G+LETP+ +SPL W+++NLPAYR +SP RG+EVG+AHG+ + GPF K GPLR+T+ VV+L+ L++Y N P P +T+ Sbjct: 9 KNLPSDPRNREVVFPAFRDPQLGNLETPVNASPLSKWFINNLPAYRPGLSPARRGLEVGMAHGYWIFGPFAKLGPLRDTDNANLAGLLAAIGLVVLLTGALSLYS----NSNPPKALPSVTV 126 The following BLAST results are available for this feature:
BLAST of CX306168 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 37
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Sequences
The
following sequences are available for this feature:
EST sequence >CX306168 ID=CX306168; Name=CX306168; organism=Citrus clementina; type=EST; length=542bpback to top |