CX306367

Overview
NameCX306367
Unique NameCX306367
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length538
Libraries
Library NameType
Drought1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig884 contig Ccv1_Contig884:1..538. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX306367 vs. ExPASy Swiss-Prot
Match: COMT1_CAPCH (Caffeic acid 3-O-methyltransferase OS=Capsicum chinense GN=COMT PE=2 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.123e-39
Identity = 80/168 (47.62%), Postives = 113/168 (67.26%), Query Frame = 1
Query:   34 EARDENFAYAFEVTMGSVLHMTMKAVINLGLFEIIAKAGPGAKLSASEIAAQLPATKNKDAPTMLDRILGLLASYGIVECSVDDV-DGS-HRLYGLNDVSKYFVPNQDGVPLGPVLALIQDKAFLDSWSQLKETIIEGGVPFDRVHGTNAFEYQGLDPRFNEVFSTAM 531
            +  DE F +A ++   SVL M +KA + L L EI+AK+GPGA +S SE+AAQLP TKN +AP MLDR+  LLA+Y ++ C++  + DG   RLY L  V K+   N DGV + P+L + QDK  ++SW  L + +++GGVPF++ +G   FEY G DPRFN+VF+  M
Sbjct:   10 QTEDEAFVFAMQLASASVLPMVLKATVELDLLEIMAKSGPGAFISPSELAAQLP-TKNPEAPVMLDRMFRLLATYSVLNCTLRTLPDGRVERLYSLAPVCKFLTKNGDGVSIAPILLMNQDKVLMESWYHLTDAVLDGGVPFNKAYGMTTFEYHGTDPRFNKVFNCGM 176          
BLAST of CX306367 vs. ExPASy Swiss-Prot
Match: COMT1_MEDSA (Caffeic acid 3-O-methyltransferase OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 1.916e-39
Identity = 86/176 (48.86%), Postives = 117/176 (66.48%), Query Frame = 1
Query:   10 EIQENMANEARDENFAYAFEVTMGSVLHMTMKAVINLGLFEIIAKAGPGAKLSASEIAAQLPATKNKDAPTMLDRILGLLASYGIVECSV-DDVDGS-HRLYGLNDVSKYFVPNQDGVPLGPVLALIQDKAFLDSWSQLKETIIEGGVPFDRVHGTNAFEYQGLDPRFNEVFSTAM 531
            E Q    + + +E   +A ++   SVL M +K+ + L L EIIAKAGPGA++S  EIA+QLP T N DAP MLDR+L LLA Y I+ CSV    DG   RLYGL  V+KY V N+DGV +  +  + QDK  ++SW  LK+ +++GG+PF++ +G  AFEY G DPRFN+VF+  M
Sbjct:    6 ETQITPTHISDEEANLFAMQLASASVLPMILKSALELDLLEIIAKAGPGAQISPIEIASQLPTT-NPDAPVMLDRMLRLLACYIILTCSVRTQQDGKVQRLYGLATVAKYLVKNEDGVSISALNLMNQDKVLMESWYHLKDAVLDGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGM 180          
BLAST of CX306367 vs. ExPASy Swiss-Prot
Match: COMT2_OCIBA (Caffeic acid 3-O-methyltransferase 2 OS=Ocimum basilicum GN=COMT2 PE=2 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 2.502e-39
Identity = 81/171 (47.37%), Postives = 112/171 (65.50%), Query Frame = 1
Query:   31 NEARDENFAYAFEVTMGSVLHMTMKAVINLGLFEIIAKAGPGAKLSASEIAAQLPATKNKDAPTMLDRILGLLASYGIVECSVDDVD--GSHRLYGLNDVSKYFVPNQDGVPLGPVLALIQDKAFLDSWSQLKETIIEGGVPFDRVHGTNAFEYQGLDPRFNEVFSTAMYN 537
            N   +ENF +A ++   SVL M +K+ I L L E+I KAG GA +S +E+AAQL  T N +A  MLDRIL LL SY I+EC +  +   G  RLYGL  V K+   N+DGV + P+  + QDK  ++SW  LK+ +++GG+PF++ +G  AFEY G DPRFN+VF+  M N
Sbjct:   11 NSDEEENFLFAMQLASASVLPMVLKSAIELDLLELIKKAGAGAFVSPAELAAQL-LTTNAEAHVMLDRILRLLTSYAILECRLKTLPDGGVQRLYGLAPVCKFLTKNEDGVSMAPLALMNQDKVLMESWYHLKDAVLDGGIPFNKAYGMTAFEYHGTDPRFNKVFNQGMSN 180          
BLAST of CX306367 vs. ExPASy Swiss-Prot
Match: COMT1_OCIBA (Caffeic acid 3-O-methyltransferase 1 OS=Ocimum basilicum GN=COMT1 PE=2 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 2.502e-39
Identity = 80/171 (46.78%), Postives = 111/171 (64.91%), Query Frame = 1
Query:   31 NEARDENFAYAFEVTMGSVLHMTMKAVINLGLFEIIAKAGPGAKLSASEIAAQLPATKNKDAPTMLDRILGLLASYGIVECSVDDVD--GSHRLYGLNDVSKYFVPNQDGVPLGPVLALIQDKAFLDSWSQLKETIIEGGVPFDRVHGTNAFEYQGLDPRFNEVFSTAMYN 537
            N   +ENF +A ++   SVL M +K+ I L L E+I K+G GA +S  ++AAQLP T N DA  MLDRIL LL SY I+EC +  +   G  RLYGL  V K+   N+DGV + P+  + QDK  ++SW  L + +++GG+PF++ +G  AFEY G DPRFN+VF+  M N
Sbjct:   11 NSDEEENFLFAMQLASASVLPMVLKSAIELDLLELIKKSGAGAFVSPVDLAAQLPTT-NPDAHVMLDRILRLLTSYAILECRLKTLPDGGVERLYGLAPVCKFLTKNEDGVSMAPLTLMNQDKVLMESWYHLSDAVVDGGIPFNKAYGMTAFEYHGTDPRFNKVFNQGMSN 180          
BLAST of CX306367 vs. ExPASy Swiss-Prot
Match: COMT1_EUCGL (Caffeic acid 3-O-methyltransferase (Fragment) OS=Eucalyptus globulus GN=COMT1 PE=3 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 2.502e-39
Identity = 79/160 (49.38%), Postives = 110/160 (68.75%), Query Frame = 1
Query:   58 YAFEVTMGSVLHMTMKAVINLGLFEIIAKAGPGAKLSASEIAAQLPATKNKDAPTMLDRILGLLASYGIVECSVDDVDGS--HRLYGLNDVSKYFVPNQDGVPLGPVLALIQDKAFLDSWSQLKETIIEGGVPFDRVHGTNAFEYQGLDPRFNEVFSTAM 531
            +A ++   SVL   + A I L L EI+A+AGPGA L+  E+A+QLP T+N DAP MLDRI  LLASY ++ C++ D+      RLYGL  + K+ V N+DGV L P+  + QD+ FL+SW  +K+ I+EGG+PF + HG  AF+Y G DPRFN++F+ AM
Sbjct:    4 FAMQLATASVLPAVLTAAIELDLLEIMARAGPGAYLTPGEVASQLP-TQNPDAPVMLDRIFRLLASYSVLTCTLCDLPEGKVERLYGLAPLCKFLVKNEDGVSLAPLRLIDQDRVFLESWYYMKDAILEGGIPFHKAHGMTAFDYPGTDPRFNKIFNRAM 162          
BLAST of CX306367 vs. ExPASy Swiss-Prot
Match: COMT1_CLABR (Caffeic acid 3-O-methyltransferase OS=Clarkia breweri GN=COMT PE=1 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 7.281e-39
Identity = 86/179 (48.04%), Postives = 118/179 (65.92%), Query Frame = 1
Query:   10 EIQENMANEARDENFAYAFEVTMGSVLHMTMKAVINLGLFEIIAKA---GPGAKLSASEIAAQLPATKNKDAPTMLDRILGLLASYGIVECSVDDV-DGS-HRLYGLNDVSKYFVPNQDGVPLGPVLALIQDKAFLDSWSQLKETIIEGGVPFDRVHGTNAFEYQGLDPRFNEVFSTAM 531
            E Q    + + +E   +A ++   SVL M +KA I L + EI+AK+   G GA +S +EIAAQLP T N DAP MLDR+L LLASY +V CS+ ++ DG   RLYGL  V K+   N+DGV L P+  + QDK  ++SW  LK+ I++GG+PF++ +G  AFEY G DPRFN+VF+  M
Sbjct:    8 ETQLTPTHVSDEEANLFAMQLASASVLPMVLKAAIELDVLEIMAKSIPHGSGAYISPAEIAAQLPTT-NPDAPVMLDRVLRLLASYSVVTCSLRELPDGKVERLYGLAPVCKFLTKNEDGVSLAPLCLMNQDKVLMESWYYLKDAILDGGIPFNKAYGMTAFEYHGTDPRFNKVFNRGM 185          
BLAST of CX306367 vs. ExPASy Swiss-Prot
Match: COMT1_ROSCH (Caffeic acid 3-O-methyltransferase OS=Rosa chinensis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 6.163e-38
Identity = 82/176 (46.59%), Postives = 116/176 (65.91%), Query Frame = 1
Query:   10 EIQENMANEARDENFAYAFEVTMGSVLHMTMKAVINLGLFEIIAKAGPGAKLSASEIAAQLPATKNKDAPTMLDRILGLLASYGIVECSVDDV-DGS-HRLYGLNDVSKYFVPNQDGVPLGPVLALIQDKAFLDSWSQLKETIIEGGVPFDRVHGTNAFEYQGLDPRFNEVFSTAM 531
            E Q      + +E   +A ++   SVL M +KA I L L EI+AKAGPGA LS +++A+QLP TKN +AP MLDR+L LLASY I+  S+  + DG   RLYGL  V K+   N+DGV +  +  + QDK  ++SW  LK+ +++GG+PF++ +G  AF+Y G DPRFN+VF+  M
Sbjct:    6 ETQMTPTQVSDEEANLFAMQLASASVLPMVLKAAIELDLLEIMAKAGPGAFLSPNDLASQLP-TKNPEAPVMLDRMLRLLASYSILTYSLRTLPDGKVERLYGLGPVCKFLTKNEDGVSIAALCLMNQDKVLVESWYHLKDAVLDGGIPFNKAYGMTAFDYHGTDPRFNKVFNKGM 180          
BLAST of CX306367 vs. ExPASy Swiss-Prot
Match: OMT1_ARATH (Quercetin 3-O-methyltransferase 1 OS=Arabidopsis thaliana GN=OMT1 PE=1 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 6.814e-37
Identity = 78/167 (46.71%), Postives = 111/167 (66.47%), Query Frame = 1
Query:   43 DENFAYAFEVTMGSVLHMTMKAVINLGLFEIIAKAGPGAKLSASEIAAQLPATKNKDAPTMLDRILGLLASYGIVECSVDDV--DGSHRLYGLNDVSKYFVPNQDGVPLGPVLALIQDKAFLDSWSQLKETIIEGGVPFDRVHGTNAFEYQGLDPRFNEVFSTAMYN 537
            DE   +A ++   SVL M +K+ + L L EI+AK G  + +S +EIA++LP TKN +AP MLDRIL LL SY ++ CS   +  DG  R+YGL  V KY   N+DGV +  +  + QDK  ++SW  LK+ I++GG+PF++ +G +AFEY G DPRFN+VF+  M N
Sbjct:   17 DEAALFAMQLASASVLPMALKSALELDLLEIMAKNG--SPMSPTEIASKLP-TKNPEAPVMLDRILRLLTSYSVLTCSNRKLSGDGVERIYGLGPVCKYLTKNEDGVSIAALCLMNQDKVLMESWYHLKDAILDGGIPFNKAYGMSAFEYHGTDPRFNKVFNNGMSN 180          
BLAST of CX306367 vs. ExPASy Swiss-Prot
Match: COMT1_SACOF (Caffeic acid 3-O-methyltransferase OS=Saccharum officinarum GN=COMT PE=2 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 2.589e-36
Identity = 76/176 (43.18%), Postives = 113/176 (64.20%), Query Frame = 1
Query:   19 ENMANEARDENFAYAFEVTMGSVLHMTMKAVINLGLFEII-AKAGPGAKLSASEIAAQLP-ATKNKDAPTMLDRILGLLASYGIVECSVDDVDGSH-RLYGLNDVSKYFVPNQDGVPLGPVLALIQDKAFLDSWSQLKETIIEGGVPFDRVHGTNAFEYQGLDPRFNEVFSTAMYN 537
            E++A  A +E   YA ++   S+L MT+K  + LGL E++ A+A  G  L+  E+ A+LP A  N DA  M+DR+L LLASY +V+C ++D DG + R Y    V K+  PN+DGV +  +  + QDK  ++SW  LK+ +++GG+PF++ +G  AFEY G DPRFN VF+  M N
Sbjct:    6 EDVAAVADEEACMYAMQLASASILPMTLKNALELGLLEVLQAEAPAGKALAPEEVVARLPVAPTNPDAADMVDRMLRLLASYDVVKCQMEDKDGKYERRYSAAPVGKWLTPNEDGVSMAALTLMNQDKVLMESWYYLKDAVLDGGIPFNKAYGMTAFEYHGTDPRFNRVFNEGMKN 181          
BLAST of CX306367 vs. ExPASy Swiss-Prot
Match: OMT2_CHRAE (Quercetin 3-O-methyltransferase 2 OS=Chrysosplenium americanum GN=OMT2 PE=1 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 1.856e-34
Identity = 74/158 (46.84%), Postives = 103/158 (65.19%), Query Frame = 1
Query:   58 YAFEVTMGSVLHMTMKAVINLGLFEIIAKAGPGAKLSASEIAAQLPATKNKDAPTMLDRILGLLASYGIVECSVDDVDGSHRLYGLNDVSKYFVPNQDGVPLGPVLALIQDKAFLDSWSQLKETIIEGGVPFDRVHGTNAFEYQGLDPRFNEVFSTAM 531
            +A ++   SVL M +K+ I L L EII   G    +S +EIA+ LP T N DAP M+DRIL LL+ Y +V CSV  VD   R+YGL  V KY   NQDGV +  +  + QDK  ++SW  LK+ +++GG+PF++ +G ++FEY G DPRFN+VF+  M
Sbjct:    3 FAMQLACASVLPMVLKSAIELDLLEIIR--GQDTCMSPTEIASHLPTT-NPDAPAMVDRILRLLSCYSVVTCSVRSVD-DQRVYGLAPVCKYLTKNQDGVSIAALCLMNQDKVLMESWYHLKDAVLDGGIPFNKAYGMSSFEYHGTDPRFNKVFNRGM 156          
The following BLAST results are available for this feature:
BLAST of CX306367 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 28
Match NameE-valueIdentityDescription
COMT1_CAPCH1.123e-3947.62Caffeic acid 3-O-methyltransferase OS=Capsicum chi... [more]
COMT1_MEDSA1.916e-3948.86Caffeic acid 3-O-methyltransferase OS=Medicago sat... [more]
COMT2_OCIBA2.502e-3947.37Caffeic acid 3-O-methyltransferase 2 OS=Ocimum bas... [more]
COMT1_OCIBA2.502e-3946.78Caffeic acid 3-O-methyltransferase 1 OS=Ocimum bas... [more]
COMT1_EUCGL2.502e-3949.38Caffeic acid 3-O-methyltransferase (Fragment) OS=E... [more]
COMT1_CLABR7.281e-3948.04Caffeic acid 3-O-methyltransferase OS=Clarkia brew... [more]
COMT1_ROSCH6.163e-3846.59Caffeic acid 3-O-methyltransferase OS=Rosa chinens... [more]
OMT1_ARATH6.814e-3746.71Quercetin 3-O-methyltransferase 1 OS=Arabidopsis t... [more]
COMT1_SACOF2.589e-3643.18Caffeic acid 3-O-methyltransferase OS=Saccharum of... [more]
OMT2_CHRAE1.856e-3446.84Quercetin 3-O-methyltransferase 2 OS=Chrysospleniu... [more]

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Properties
Property NameValue
Genbank descriptionC18017C07Rv Drought1 Citrus clementina cDNA clone C18017C07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX306367 ID=CX306367; Name=CX306367; organism=Citrus clementina; type=EST; length=538bp
GCGGGGAAGGAAATTCAAGAAAATATGGCTAATGAAGCGAGAGACGAAAA
CTTTGCATATGCCTTTGAAGTGACGATGGGTTCAGTGCTCCACATGACCA
TGAAAGCAGTAATTAATCTGGGACTTTTCGAGATCATAGCCAAAGCTGGT
CCTGGAGCAAAGCTCTCAGCTTCAGAGATTGCCGCTCAGTTGCCCGCCAC
GAAGAACAAAGACGCACCCACGATGCTGGACCGGATACTCGGGCTTCTGG
CTAGCTATGGCATTGTTGAATGCTCAGTTGATGATGTCGATGGTTCTCAC
AGGCTATACGGTTTGAATGATGTTTCCAAATACTTTGTGCCTAATCAAGA
TGGTGTCCCATTAGGCCCTGTATTGGCCTTAATTCAGGACAAGGCCTTTC
TCGACAGCTGGTCCCAACTGAAAGAAACTATTATTGAAGGAGGAGTTCCA
TTTGACCGAGTCCACGGAACGAACGCTTTCGAGTACCAAGGATTGGACCC
CAGGTTCAATGAAGTTTTCAGCACAGCAATGTACAACC
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