CX306381
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX306381 vs. ExPASy Swiss-Prot
Match: UBE2N_DROME (Ubiquitin-conjugating enzyme E2 N OS=Drosophila melanogaster GN=ben PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 3.024e-22 Identity = 47/83 (56.63%), Postives = 64/83 (77.11%), Query Frame = -1 Query: 245 PKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYAM 493 PKV F TK++HPNI+ G ICLD+LK++WSPAL I +LLSI +LL+ PNPDDPL ++A ++K ++A+ AR WTQKYA+ Sbjct: 67 PKVRFITKIYHPNIDRLGRICLDVLKDKWSPALQIRTILLSIQALLSAPNPDDPLANDVAELWKVNEAEAIRNAREWTQKYAV 149
BLAST of CX306381 vs. ExPASy Swiss-Prot
Match: UBC36_ARATH (Ubiquitin carrier protein E2 36 OS=Arabidopsis thaliana GN=UBC36 PE=1 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 3.024e-22 Identity = 50/84 (59.52%), Postives = 63/84 (75.00%), Query Frame = -1 Query: 242 PKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYAMG 493 PKV F TK++HPNI+ G ICLDILK++WSPAL I VLLSI +LL+ PNPDDPL IA +KS++A+ TA+ WT+ YA G Sbjct: 69 PKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAVETAKEWTRLYASG 152
BLAST of CX306381 vs. ExPASy Swiss-Prot
Match: UBC35_ARATH (Ubiquitin carrier protein E2 35 OS=Arabidopsis thaliana GN=UBC35 PE=1 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 3.024e-22 Identity = 50/84 (59.52%), Postives = 63/84 (75.00%), Query Frame = -1 Query: 242 PKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYAMG 493 PKV F TK++HPNI+ G ICLDILK++WSPAL I VLLSI +LL+ PNPDDPL IA +KS++A+ TA+ WT+ YA G Sbjct: 69 PKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAVDTAKEWTRLYASG 152
BLAST of CX306381 vs. ExPASy Swiss-Prot
Match: UBE2N_DICDI (Probable ubiquitin-conjugating enzyme E2 N OS=Dictyostelium discoideum GN=ube2n PE=3 SV=2) HSP 1 Score: 99.7525 bits (247), Expect = 7.447e-21 Identity = 46/82 (56.10%), Postives = 62/82 (75.61%), Query Frame = -1 Query: 248 PKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYA 493 PKV F TK++HPNI+ G ICLDILK++WSPAL I VLLSI +LL+ PNPDDPL ++A +K+++ + + AR WT+ YA Sbjct: 67 PKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEHWKTNEKEAMARAREWTRLYA 148
BLAST of CX306381 vs. ExPASy Swiss-Prot
Match: UE2NL_HUMAN (Putative ubiquitin-conjugating enzyme E2 N-like OS=Homo sapiens GN=UBE2NL PE=5 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 3.696e-20 Identity = 45/83 (54.22%), Postives = 61/83 (73.49%), Query Frame = -1 Query: 245 PKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYAM 493 PKV F TK++HPN++ I LDILK++WSPAL I VLLSI +LL PNPDDPL ++ +K+++A+ TAR+WT+ YAM Sbjct: 68 PKVRFMTKIYHPNVDKLERISLDILKDKWSPALQIRTVLLSIQALLNAPNPDDPLANDVVEQWKTNEAQAIETARAWTRLYAM 150
BLAST of CX306381 vs. ExPASy Swiss-Prot
Match: UBE2T_XENLA (Ubiquitin-conjugating enzyme E2 T OS=Xenopus laevis GN=ube2t PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 1.405e-19 Identity = 45/88 (51.14%), Postives = 63/88 (71.59%), Query Frame = -1 Query: 245 PPKVAFRTKVFHPNINSNGSICLDILK----EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYAM 496 PPK+ F T ++HPNI+S G ICLDILK W PAL IS VL SI L+++PNPDDPL+ +I+ +K ++A + S A+ WT+K+A+ Sbjct: 65 PPKIRFLTPIYHPNIDSAGRICLDILKLPPKGAWRPALNISTVLTSIQLLMSEPNPDDPLMADISSEFKYNRAVFFSNAKKWTEKHAL 152
BLAST of CX306381 vs. ExPASy Swiss-Prot
Match: UBC13_SCHPO (Ubiquitin-conjugating enzyme E2 13 OS=Schizosaccharomyces pombe GN=ubc13 PE=1 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 1.405e-19 Identity = 43/84 (51.19%), Postives = 60/84 (71.43%), Query Frame = -1 Query: 245 PPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYAM 496 PP V F TK++HPN++ G ICL LK+ WSPAL I VLLSI +L+ PNPDDPL ++A ++K ++ + + AR WT+KYA+ Sbjct: 65 PPNVRFLTKIYHPNVDKLGRICLSTLKKDWSPALQIRTVLLSIQALMGAPNPDDPLDNDVAKIWKENEPQAIANAREWTKKYAV 148
BLAST of CX306381 vs. ExPASy Swiss-Prot
Match: UBC27_ARATH (Ubiquitin carrier protein E2 27 OS=Arabidopsis thaliana GN=UBC27 PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 6.971e-19 Identity = 45/84 (53.57%), Postives = 60/84 (71.43%), Query Frame = -1 Query: 248 PPKVAFRTKVFHPNINS-NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYA 496 PPK+ F TKV+HPNI+S +G+ICLDILK+QWSPALT+ L+SI +LL+ P P DP +A Y + + STAR WT+ +A Sbjct: 66 PPKMQFSTKVWHPNISSQSGAICLDILKDQWSPALTLKTALVSIQALLSAPEPKDPQDAVVAEQYMKNYQVFVSTARYWTETFA 149
BLAST of CX306381 vs. ExPASy Swiss-Prot
Match: UBCB_DICDI (Ubiquitin conjugating enzyme E2 B OS=Dictyostelium discoideum GN=ubcB PE=1 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 1.553e-18 Identity = 43/84 (51.19%), Postives = 59/84 (70.24%), Query Frame = -1 Query: 248 PPKVAFRTKVFHPNIN-SNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYA 496 PP + F TK++HPNI S+G+IC ++ WSP L I VL +I S+LTDPNPD+PL EIA +K+D+ + TA+ WT+KYA Sbjct: 65 PPTLKFTTKIYHPNIKTSDGAICAEVFST-WSPQLKILDVLTTIRSILTDPNPDNPLETEIAQQFKTDRNAFNKTAKEWTKKYA 147
BLAST of CX306381 vs. ExPASy Swiss-Prot
Match: UBC13_YEAST (Ubiquitin-conjugating enzyme E2 13 OS=Saccharomyces cerevisiae GN=UBC13 PE=1 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 1.553e-18 Identity = 43/82 (52.44%), Postives = 57/82 (69.51%), Query Frame = -1 Query: 248 PKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYA 493 PKV F TK++HPNI+ G ICLD+LK WSPAL I VLLSI +LL PNP+DPL ++A + ++ ++ AR WT+ YA Sbjct: 67 PKVRFLTKIYHPNIDRLGRICLDVLKTNWSPALQIRTVLLSIQALLASPNPNDPLANDVAEDWIKNEQGAKAKAREWTKLYA 148 The following BLAST results are available for this feature:
BLAST of CX306381 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 184
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Sequences
The
following sequences are available for this feature:
EST sequence >CX306381 ID=CX306381; Name=CX306381; organism=Citrus clementina; type=EST; length=496bpback to top |