CX306381
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX306381 vs. ExPASy Swiss-Prot
Match: UBC1_YEAST (Ubiquitin-conjugating enzyme E2-24 kDa OS=Saccharomyces cerevisiae GN=UBC1 PE=1 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 2.028e-18 Identity = 42/84 (50.00%), Postives = 56/84 (66.67%), Query Frame = -1 Query: 248 PPKVAFRTKVFHPNINS-NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYA 496 PPK+ F TKV+HPNI+S G+ICLDILK WSP +T+ L+S+ +LL P P+DP E+A Y D+ + TA WT+ YA Sbjct: 66 PPKMQFDTKVYHPNISSVTGAICLDILKNAWSPVITLKSALISLQALLQSPEPNDPQDAEVAQHYLRDRESFNKTAALWTRLYA 149
BLAST of CX306381 vs. ExPASy Swiss-Prot
Match: UBE2K_MOUSE (Ubiquitin-conjugating enzyme E2 K OS=Mus musculus GN=Ube2k PE=2 SV=3) HSP 1 Score: 90.1225 bits (222), Expect = 5.901e-18 Identity = 43/84 (51.19%), Postives = 58/84 (69.05%), Query Frame = -1 Query: 248 PPKVAFRTKVFHPNINS-NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYA 496 PPKV F TK++HPNI+S G+ICLDILK+QW+ A+T+ VLLS+ +LL PDDP +A+ YK + ++ TAR W YA Sbjct: 70 PPKVRFITKIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYA 153
BLAST of CX306381 vs. ExPASy Swiss-Prot
Match: UBE2K_HUMAN (Ubiquitin-conjugating enzyme E2 K OS=Homo sapiens GN=UBE2K PE=1 SV=3) HSP 1 Score: 90.1225 bits (222), Expect = 5.901e-18 Identity = 43/84 (51.19%), Postives = 58/84 (69.05%), Query Frame = -1 Query: 248 PPKVAFRTKVFHPNINS-NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYA 496 PPKV F TK++HPNI+S G+ICLDILK+QW+ A+T+ VLLS+ +LL PDDP +A+ YK + ++ TAR W YA Sbjct: 70 PPKVRFITKIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYA 153
BLAST of CX306381 vs. ExPASy Swiss-Prot
Match: UBE2K_BOVIN (Ubiquitin-conjugating enzyme E2 K OS=Bos taurus GN=UBE2K PE=1 SV=3) HSP 1 Score: 90.1225 bits (222), Expect = 5.901e-18 Identity = 43/84 (51.19%), Postives = 58/84 (69.05%), Query Frame = -1 Query: 248 PPKVAFRTKVFHPNINS-NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYA 496 PPKV F TK++HPNI+S G+ICLDILK+QW+ A+T+ VLLS+ +LL PDDP +A+ YK + ++ TAR W YA Sbjct: 70 PPKVRFITKIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYA 153
BLAST of CX306381 vs. ExPASy Swiss-Prot
Match: UBC1_SCHPO (Ubiquitin-conjugating enzyme E2 1 OS=Schizosaccharomyces pombe GN=ubc1 PE=2 SV=2) HSP 1 Score: 90.1225 bits (222), Expect = 5.901e-18 Identity = 40/84 (47.62%), Postives = 57/84 (67.86%), Query Frame = -1 Query: 248 PPKVAFRTKVFHPNINSN-GSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYA 496 PPK+ F TK++HPN++S G+ICLDILK+QWSP T+ L+S+ SLL P P +P ++A +Y + ++ TAR WT YA Sbjct: 67 PPKMNFDTKIYHPNVSSQTGAICLDILKDQWSPVYTMKSALISLQSLLCTPEPSNPQDAQVAQVYLQNYQQFVRTAREWTSSYA 150
BLAST of CX306381 vs. ExPASy Swiss-Prot
Match: UBE2T_HUMAN (Ubiquitin-conjugating enzyme E2 T OS=Homo sapiens GN=UBE2T PE=1 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 7.707e-18 Identity = 41/87 (47.13%), Postives = 60/87 (68.97%), Query Frame = -1 Query: 248 PPKVAFRTKVFHPNINSNGSICLDILK----EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYA 496 PP++ F T ++HPNI+S G ICLD+LK W P+L I+ VL SI L+++PNPDDPL+ +I+ +K +K + AR WT+K+A Sbjct: 65 PPQIRFLTPIYHPNIDSAGRICLDVLKLPPKGAWRPSLNIATVLTSIQLLMSEPNPDDPLMADISSEFKYNKPAFLKNARQWTEKHA 151
BLAST of CX306381 vs. ExPASy Swiss-Prot
Match: COP10_ARATH (Constitutive photomorphogenesis protein 10 OS=Arabidopsis thaliana GN=COP10 PE=1 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 2.242e-17 Identity = 35/83 (42.17%), Postives = 60/83 (72.29%), Query Frame = -1 Query: 248 PPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYA 496 PPK+ F+T+++H N+++ G + ++IL++ WSPALTI+KVL +I S+ P P P +P IA +Y +D+ K++ A+ WT ++A Sbjct: 99 PPKLVFKTRIYHCNVDTAGDLSVNILRDSWSPALTITKVLQAIRSIFLKPEPYSPALPVIARLYLTDREKHDEVAKEWTLRFA 181
BLAST of CX306381 vs. ExPASy Swiss-Prot
Match: UBE2T_MOUSE (Ubiquitin-conjugating enzyme E2 T OS=Mus musculus GN=Ube2t PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 3.825e-17 Identity = 41/87 (47.13%), Postives = 59/87 (67.82%), Query Frame = -1 Query: 248 PPKVAFRTKVFHPNINSNGSICLDILK----EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYA 496 PP+V F T ++HPNI+S+G ICLDILK W P+L I+ VL SI L+ +PNPDDPL+ +I+ +K +K + A+ WT+ +A Sbjct: 65 PPQVRFLTPIYHPNIDSSGRICLDILKLPPKGAWRPSLNIATVLTSIQLLMAEPNPDDPLMADISSEFKYNKIAFLKKAKQWTEAHA 151
BLAST of CX306381 vs. ExPASy Swiss-Prot
Match: UBC2_WHEAT (Ubiquitin-conjugating enzyme E2 2 OS=Triticum aestivum GN=UBC2 PE=1 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 4.995e-17 Identity = 42/84 (50.00%), Postives = 55/84 (65.48%), Query Frame = -1 Query: 260 PPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKY-----ESTARSWT 496 PP V F +++FHPNI ++GSICLDIL+ QWSP ++ +L SI SLL DPNP+ P E A MY +K +Y E +SWT Sbjct: 67 PPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMYSENKREYNRKVREVVEQSWT 150
BLAST of CX306381 vs. ExPASy Swiss-Prot
Match: UBE2T_BOVIN (Ubiquitin-conjugating enzyme E2 T OS=Bos taurus GN=UBE2T PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 6.524e-17 Identity = 39/87 (44.83%), Postives = 58/87 (66.67%), Query Frame = -1 Query: 248 PPKVAFRTKVFHPNINSNGSICLDILK----EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYA 496 PP++ F T ++HPNI+S G ICLD+LK W P+L I+ +L I L+ +PNPDDPL+ +I+ +K +K + AR WT+K+A Sbjct: 65 PPQIRFLTPIYHPNIDSAGRICLDVLKLPPKGAWRPSLNIATLLTCIQQLMAEPNPDDPLMADISSEFKYNKPVFFKNARQWTEKHA 151 The following BLAST results are available for this feature:
BLAST of CX306381 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 184
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Sequences
The
following sequences are available for this feature:
EST sequence >CX306381 ID=CX306381; Name=CX306381; organism=Citrus clementina; type=EST; length=496bpback to top |