CX306381
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX306381 vs. ExPASy Swiss-Prot
Match: UBC37_ARATH (Probable ubiquitin carrier protein E2 37 OS=Arabidopsis thaliana GN=UBC37 PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 6.524e-17 Identity = 42/87 (48.28%), Postives = 60/87 (68.97%), Query Frame = -1 Query: 248 PPKVAFRTKVFHPNINSNGSICLDIL----KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYA 496 PP V+F T ++HPNI+++G ICLDIL K W P+L IS VL S+ LL++PNPDD L+ E++ YK ++ ++ AR T+KYA Sbjct: 78 PPIVSFATPIYHPNIDNSGRICLDILNLPPKGAWQPSLNISTVLTSMRLLLSEPNPDDGLMCEVSREYKYNRQTFDYKAREMTEKYA 164
BLAST of CX306381 vs. ExPASy Swiss-Prot
Match: UBC1_ARATH (Ubiquitin-conjugating enzyme E2 1 OS=Arabidopsis thaliana GN=UBC1 PE=1 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 6.524e-17 Identity = 42/84 (50.00%), Postives = 53/84 (63.10%), Query Frame = -1 Query: 260 PPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTAR-----SWT 496 PP V F +++FHPNI ++GSICLDIL+ QWSP ++ +L SI SLL DPNP+ P E A MY K +Y R SWT Sbjct: 67 PPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMYSESKREYNRRVRDVVEQSWT 150
BLAST of CX306381 vs. ExPASy Swiss-Prot
Match: UBC14_SCHPO (Ubiquitin-conjugating enzyme E2 14 OS=Schizosaccharomyces pombe GN=ubc14 PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 8.521e-17 Identity = 36/84 (42.86%), Postives = 58/84 (69.05%), Query Frame = -1 Query: 248 PPKVAFRTKVFHPNINSNGSICLDILKEQ-WSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYA 496 PP + F T+++HPN +S G++CL ILK+Q + P++ + VL I LL +PNPDDPLV IA Y++D+ ++ AR + +++A Sbjct: 70 PPTIEFTTRIYHPNFDSEGNVCLAILKQQVFKPSIKLRSVLEQILQLLREPNPDDPLVASIAEQYRNDRPSFDKIARDYVEQFA 153
BLAST of CX306381 vs. ExPASy Swiss-Prot
Match: UBCD6_DROME (Ubiquitin-conjugating enzyme E2-17 kDa OS=Drosophila melanogaster GN=UbcD6 PE=2 SV=2) HSP 1 Score: 85.8853 bits (211), Expect = 1.113e-16 Identity = 37/81 (45.68%), Postives = 55/81 (67.90%), Query Frame = -1 Query: 254 PPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQK 496 PP V F +KVFHPN+ ++G ICLDIL+ +WSP +S +L SI SLL+DPNP+ P A +YK ++ +YE ++ ++ Sbjct: 67 PPTVRFVSKVFHPNVYADGGICLDILQNRWSPTYDVSAILTSIQSLLSDPNPNSPANSTAAQLYKENRREYEKRVKACVEQ 147
BLAST of CX306381 vs. ExPASy Swiss-Prot
Match: UBC2_MEDSA (Ubiquitin-conjugating enzyme E2 2 OS=Medicago sativa GN=UBC2 PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 1.453e-16 Identity = 41/84 (48.81%), Postives = 55/84 (65.48%), Query Frame = -1 Query: 260 PPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKY-----ESTARSWT 496 PP V F +++FHPNI ++GSICLDIL+ QWSP ++ +L SI SLL DPNP+ P E A M+ +K +Y E +SWT Sbjct: 67 PPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREVVEQSWT 150
BLAST of CX306381 vs. ExPASy Swiss-Prot
Match: UBC2_ARATH (Ubiquitin-conjugating enzyme E2 2 OS=Arabidopsis thaliana GN=UBC2 PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.898e-16 Identity = 41/84 (48.81%), Postives = 54/84 (64.29%), Query Frame = -1 Query: 260 PPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKY-----ESTARSWT 496 PP V F +++FHPNI ++GSICLDIL+ QWSP ++ +L SI SLL DPNP+ P E A M+ K +Y E +SWT Sbjct: 67 PPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSESKREYNRRVREVVEQSWT 150
BLAST of CX306381 vs. ExPASy Swiss-Prot
Match: UBE2B_RAT (Ubiquitin-conjugating enzyme E2 B OS=Rattus norvegicus GN=Ube2b PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 3.238e-16 Identity = 36/72 (50.00%), Postives = 52/72 (72.22%), Query Frame = -1 Query: 281 PPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYE 496 PP V F +K+FHPN+ ++GSICLDIL+ +WSP +S +L SI SLL +PNP+ P + A +Y+ +K +YE Sbjct: 67 PPTVRFLSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYE 138
BLAST of CX306381 vs. ExPASy Swiss-Prot
Match: UBE2B_RABIT (Ubiquitin-conjugating enzyme E2 B OS=Oryctolagus cuniculus GN=UBE2B PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 3.238e-16 Identity = 36/72 (50.00%), Postives = 52/72 (72.22%), Query Frame = -1 Query: 281 PPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYE 496 PP V F +K+FHPN+ ++GSICLDIL+ +WSP +S +L SI SLL +PNP+ P + A +Y+ +K +YE Sbjct: 67 PPTVRFLSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYE 138
BLAST of CX306381 vs. ExPASy Swiss-Prot
Match: UBE2B_MOUSE (Ubiquitin-conjugating enzyme E2 B OS=Mus musculus GN=Ube2b PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 3.238e-16 Identity = 36/72 (50.00%), Postives = 52/72 (72.22%), Query Frame = -1 Query: 281 PPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYE 496 PP V F +K+FHPN+ ++GSICLDIL+ +WSP +S +L SI SLL +PNP+ P + A +Y+ +K +YE Sbjct: 67 PPTVRFLSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYE 138
BLAST of CX306381 vs. ExPASy Swiss-Prot
Match: UBE2B_HUMAN (Ubiquitin-conjugating enzyme E2 B OS=Homo sapiens GN=UBE2B PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 3.238e-16 Identity = 36/72 (50.00%), Postives = 52/72 (72.22%), Query Frame = -1 Query: 281 PPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYE 496 PP V F +K+FHPN+ ++GSICLDIL+ +WSP +S +L SI SLL +PNP+ P + A +Y+ +K +YE Sbjct: 67 PPTVRFLSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYE 138 The following BLAST results are available for this feature:
BLAST of CX306381 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 184
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Sequences
The
following sequences are available for this feature:
EST sequence >CX306381 ID=CX306381; Name=CX306381; organism=Citrus clementina; type=EST; length=496bpback to top |