CX306388
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX306388 vs. ExPASy Swiss-Prot
Match: TRXH_PICMA (Thioredoxin H-type OS=Picea mariana GN=SB09 PE=2 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 7.489e-33 Identity = 58/105 (55.24%), Postives = 81/105 (77.14%), Query Frame = -3 Query: 194 EGQVISCHTVESWNEQLQKGIAAKKLIVVDFTASWCPPCKLMSPILSELAKKLPAVIFLKVDVDELKSVAEEWAVEAMPTFVLTKEGKVLERIVGAKKDELQLAV 508 EG V +CH+ E W +LQ+ I K+L+ VDFTA+WC PC+++ P+ EL+KK P + FLKVDVDEL+ VA+EW VEAMPTF+ K+GK ++++VGAKKD+L+ V Sbjct: 3 EGNVFACHSTEGWRSKLQEAIDTKRLVAVDFTATWCGPCRVIGPVFVELSKKFPEIFFLKVDVDELRDVAQEWDVEAMPTFIFIKDGKAVDKVVGAKKDDLERKV 107
BLAST of CX306388 vs. ExPASy Swiss-Prot
Match: TRXH_ORYSJ (Thioredoxin H-type OS=Oryza sativa subsp. japonica GN=TRXH PE=1 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 5.367e-31 Identity = 58/110 (52.73%), Postives = 83/110 (75.45%), Query Frame = -3 Query: 185 AEEGQVISCHTVESWNEQLQKGIAAKKLIVVDFTASWCPPCKLMSPILSELAKKLPAVIFLKVDVDELKSVAEEWAVEAMPTFVLTKEGKVLERIVGAKKDELQLAVEKH 514 AEEG VI+CH + ++ Q+ K A K++++DFTASWC PC+ ++P+ +E AKK P +FLKVDVDELK VAE++ VEAMPTF+ K+G +++VGA+KD+LQ + KH Sbjct: 3 AEEGVVIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFPGAVFLKVDVDELKEVAEKYNVEAMPTFLFIKDGAEADKVVGARKDDLQNTIVKH 112
BLAST of CX306388 vs. ExPASy Swiss-Prot
Match: TRXH_ORYSI (Thioredoxin H-type OS=Oryza sativa subsp. indica GN=TRXH PE=1 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 5.367e-31 Identity = 58/110 (52.73%), Postives = 83/110 (75.45%), Query Frame = -3 Query: 185 AEEGQVISCHTVESWNEQLQKGIAAKKLIVVDFTASWCPPCKLMSPILSELAKKLPAVIFLKVDVDELKSVAEEWAVEAMPTFVLTKEGKVLERIVGAKKDELQLAVEKH 514 AEEG VI+CH + ++ Q+ K A K++++DFTASWC PC+ ++P+ +E AKK P +FLKVDVDELK VAE++ VEAMPTF+ K+G +++VGA+KD+LQ + KH Sbjct: 3 AEEGVVIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFPGAVFLKVDVDELKEVAEKYNVEAMPTFLFIKDGAEADKVVGARKDDLQNTIVKH 112
BLAST of CX306388 vs. ExPASy Swiss-Prot
Match: TRXH_BRAOL (Thioredoxin H-type OS=Brassica oleracea GN=BOPC17 PE=2 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 1.726e-29 Identity = 59/107 (55.14%), Postives = 81/107 (75.70%), Query Frame = -3 Query: 185 GQVISCHTVESWNEQLQKGIAAKKLIVVDFTASWCPPCKLMSPILSELAKKLPAVIFLKVDVDELKSVAEEWAVEAMPTFVLTKEGKVLERIVGAKKDELQLAVEKH 505 G+VI+CHTVE WN +L+ + KLIV+DFTA WCPPC+ ++PI ELAKK V+F KVDVDEL +VA+E+ V+AMPTFV K + L+++VGA K+E++ + KH Sbjct: 11 GEVIACHTVEDWNNKLKAAKESNKLIVIDFTAVWCPPCRFIAPIFVELAKKHLDVVFFKVDVDELATVAQEFDVQAMPTFVYMKGEEKLDKVVGAAKEEIEAKLLKH 117
BLAST of CX306388 vs. ExPASy Swiss-Prot
Match: TRXH1_BRANA (Thioredoxin H-type 1 OS=Brassica napus GN=THL-1 PE=2 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 1.726e-29 Identity = 59/107 (55.14%), Postives = 81/107 (75.70%), Query Frame = -3 Query: 185 GQVISCHTVESWNEQLQKGIAAKKLIVVDFTASWCPPCKLMSPILSELAKKLPAVIFLKVDVDELKSVAEEWAVEAMPTFVLTKEGKVLERIVGAKKDELQLAVEKH 505 G+VI+CHTVE WN +L+ + KLIV+DFTA WCPPC+ ++PI ELAKK V+F KVDVDEL +VA+E+ V+AMPTFV K + L+++VGA K+E++ + KH Sbjct: 11 GEVIACHTVEDWNNKLKAAKESNKLIVIDFTAVWCPPCRFIAPIFVELAKKHLDVVFFKVDVDELATVAQEFDVQAMPTFVYMKGEEKLDKVVGAAKEEIEAKLLKH 117
BLAST of CX306388 vs. ExPASy Swiss-Prot
Match: TRXH_BRARA (Thioredoxin H-type OS=Brassica rapa GN=PEC-2 PE=2 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 2.255e-29 Identity = 59/107 (55.14%), Postives = 81/107 (75.70%), Query Frame = -3 Query: 185 GQVISCHTVESWNEQLQKGIAAKKLIVVDFTASWCPPCKLMSPILSELAKKLPAVIFLKVDVDELKSVAEEWAVEAMPTFVLTKEGKVLERIVGAKKDELQLAVEKH 505 G+VI+CHTVE WN +L+ + KLIV+DFTA WCPPC+ ++PI ELAKK V+F KVDVDEL +VA+E+ V+AMPTFV K + L+++VGA K+E++ + KH Sbjct: 11 GEVIACHTVEDWNNKLKAAKESNKLIVIDFTAVWCPPCRFIAPIFVELAKKHLDVVFFKVDVDELATVAKEFDVQAMPTFVYMKGEEKLDKVVGAAKEEIEAKLLKH 117
BLAST of CX306388 vs. ExPASy Swiss-Prot
Match: TRXH2_ARATH (Thioredoxin H-type 2 OS=Arabidopsis thaliana GN=TRX2 PE=2 SV=2) HSP 1 Score: 106.301 bits (264), Expect = 9.175e-23 Identity = 52/109 (47.71%), Postives = 72/109 (66.06%), Query Frame = -3 Query: 188 AEEGQVISCHTVESWNEQLQKGIAAKKLIVVDFTASWCPPCKLMSPILSELAKKLPAVIFLKVDVDELKSVAEEWAVEAMPTFVLTKEGKVLERIVGAKKDELQLAVEK 514 +E +V+ + W + + KL+VVDF+ASWC PC+++ P + +A K V F+K+DVDEL VA+E+ V AMPTFVL K GK +ERI+GAKKDEL+ V K Sbjct: 22 SEPSRVLKFSSSARWQLHFNEIKESNKLLVVDFSASWCGPCRMIEPAIHAMADKFNDVDFVKLDVDELPDVAKEFNVTAMPTFVLVKRGKEIERIIGAKKDELEKKVSK 130
BLAST of CX306388 vs. ExPASy Swiss-Prot
Match: TRXH_CHLRE (Thioredoxin H-type OS=Chlamydomonas reinhardtii GN=TRXH PE=1 SV=3) HSP 1 Score: 96.2857 bits (238), Expect = 9.495e-20 Identity = 50/108 (46.30%), Postives = 69/108 (63.89%), Query Frame = -3 Query: 185 GQVISCHTVESWNEQLQKGIAAKKLIVVDFTASWCPPCKLMSPILSELAKKLPA-VIFLKVDVDELKSVAEEWAVEAMPTFVLTKEGKVLERIVGAKKDELQLAVEKH 505 G VI + +W+ QL KG K IVVDFTA+WC PCK+++P+ L+ VIFLKVDVD + +VAE + AMPTF + K+G + +VGA +D+L+ V KH Sbjct: 3 GSVIVIDSKAAWDAQLAKGKEEHKPIVVDFTATWCGPCKMIAPLFETLSNDYAGKVIFLKVDVDAVAAVAEAAGITAMPTFHVYKDGVKADDLVGASQDKLKALVAKH 110
BLAST of CX306388 vs. ExPASy Swiss-Prot
Match: TRXH9_ARATH (Thioredoxin H-type 9 OS=Arabidopsis thaliana GN=TRX9 PE=1 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 6.155e-19 Identity = 43/104 (41.35%), Postives = 67/104 (64.42%), Query Frame = -3 Query: 194 GQVISCHTVESWNEQLQKGIAAKKLIVVDFTASWCPPCKLMSPILSELAKKLPAVIFLKVDVDELKSVAEEWAVEAMPTFVLTKEGKVLERIVGAKKDELQLAV 505 G V T ESW+++L + K++V +F+A+WC PCK+++P EL++K +++FL VDVDEL + W ++A PTF K G+ + ++VGA K ELQ V Sbjct: 23 GNVHLITTKESWDDKLAEADRDGKIVVANFSATWCGPCKIVAPFFIELSEKHSSLMFLLVDVDELSDFSSSWDIKATPTFFFLKNGQQIGKLVGANKPELQKKV 126
BLAST of CX306388 vs. ExPASy Swiss-Prot
Match: TRXH_POPJC (Thioredoxin H-type OS=Populus jackii PE=1 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 2.586e-17 Identity = 37/100 (37.00%), Postives = 64/100 (64.00%), Query Frame = -3 Query: 206 GQVISCHTVESWNEQLQKGIAAKKLIVVDFTASWCPPCKLMSPILSELAKKLPAVIFLKVDVDELKSVAEEWAVEAMPTFVLTKEGKVLERIVGAKKDEL 505 G V T E W+++L + K+++ +F+A WC PCK ++P EL++ P+++FL +DVDEL + W ++A PTF ++G+ ++++VGA K EL Sbjct: 24 GNVHLITTKERWDQKLSEASRDGKIVLANFSARWCGPCKQIAPYYIELSENYPSLMFLVIDVDELSDFSASWEIKATPTFFFLRDGQQVDKLVGANKPEL 123 The following BLAST results are available for this feature:
BLAST of CX306388 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 102
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX306388 ID=CX306388; Name=CX306388; organism=Citrus clementina; type=EST; length=528bpback to top |