CX306398
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX306398 vs. ExPASy Swiss-Prot
Match: UBC2_EMENI (Ubiquitin-conjugating enzyme E2 2 OS=Emericella nidulans GN=uvsJ PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 7.214e-15 Identity = 37/88 (42.05%), Postives = 54/88 (61.36%), Query Frame = -2 Query: 185 PFKPPKVAFRTKVFHPNINSKGSICLDILKE*WSPALTISKVLPSICSLLTDPNPDDPLVPEIAHMYKTDRAKY-----ETTARSWTQ 433 P KPP V F +++FHPN+ G +CLDIL+ WSP ++ +L SI SLL DPN P E +++Y+ +R +Y ET +SW + Sbjct: 64 PNKPPGVKFISQMFHPNVYGTGELCLDILQNRWSPTYDVAAILTSIQSLLNDPNTSSPANVEASNLYRDNRKEYIKRVRETVEKSWEE 151
BLAST of CX306398 vs. ExPASy Swiss-Prot
Match: UBC2_CRYNE (Ubiquitin-conjugating enzyme E2 2 OS=Cryptococcus neoformans GN=UBC2 PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 9.422e-15 Identity = 38/86 (44.19%), Postives = 52/86 (60.47%), Query Frame = -2 Query: 191 PFKPPKVAFRTKVFHPNINSKGSICLDILKE*WSPALTISKVLPSICSLLTDPNPDDPLVPEIAHMYKTDRAKYE-----TTARSW 433 P KPP V F +K+FHPNI + G +CLDIL+ WSP ++ +L S+ SLL DPNP P + A ++K + +YE T SW Sbjct: 64 PNKPPTVRFISKMFHPNIYANGELCLDILQNRWSPTYDVAAILTSVQSLLNDPNPASPANVDAAQLFKENLKEYERRVKKTVELSW 149
BLAST of CX306398 vs. ExPASy Swiss-Prot
Match: UBC12_DROME (NEDD8-conjugating enzyme Ubc12 OS=Drosophila melanogaster GN=CG7375 PE=1 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 1.231e-14 Identity = 33/79 (41.77%), Postives = 54/79 (68.35%), Query Frame = -2 Query: 197 PFKPPKVAFRTKVFHPNINSKGSICLDILKE*WSPALTISKVLPSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTAR 433 P +PPKV T+V+HPNI+ G++CL+IL+E W+P L I+ ++ + L +PNP+DPL E A + +T+R ++E + Sbjct: 84 PHEPPKVKCATQVYHPNIDLDGNVCLNILREDWNPVLNINSIVYGLQFLFLEPNPEDPLNKEAADVLQTNRRQFENNVK 162
BLAST of CX306398 vs. ExPASy Swiss-Prot
Match: UBC2_KLULA (Ubiquitin-conjugating enzyme E2 2 OS=Kluyveromyces lactis GN=UBC2 PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.607e-14 Identity = 36/86 (41.86%), Postives = 53/86 (61.63%), Query Frame = -2 Query: 191 PFKPPKVAFRTKVFHPNINSKGSICLDILKE*WSPALTISKVLPSICSLLTDPNPDDPLVPEIAHMYKTDRAKY-----ETTARSW 433 P KPP V F +++FHPN+ + G ICLDIL+ W+P ++ +L SI SL DPNP P E A +++ +++Y ET +SW Sbjct: 64 PNKPPHVKFLSEMFHPNVYANGEICLDILQNRWTPTYDVASILTSIQSLFNDPNPASPANVEAATLFQDHKSQYVKRVKETVEKSW 149
BLAST of CX306398 vs. ExPASy Swiss-Prot
Match: UBC2_NEUCR (Ubiquitin-conjugating enzyme E2 2 OS=Neurospora crassa GN=mus-8 PE=3 SV=3) HSP 1 Score: 77.7962 bits (190), Expect = 2.099e-14 Identity = 38/86 (44.19%), Postives = 53/86 (61.63%), Query Frame = -2 Query: 191 PFKPPKVAFRTKVFHPNINSKGSICLDILKE*WSPALTISKVLPSICSLLTDPNPDDPLVPEIAHMYKTDRAKY-----ETTARSW 433 P KPP V F +++FHPN+ + G +CLDIL+ WSP ++ VL SI SLL DPN E +++YK +R +Y ET +SW Sbjct: 64 PNKPPSVKFISEMFHPNVYATGELCLDILQNRWSPTYDVAAVLTSIQSLLNDPNTGSRANVEASNLYKDNRKEYHKRVRETVEKSW 149
BLAST of CX306398 vs. ExPASy Swiss-Prot
Match: UBC2_DICDI (Ubiquitin-conjugating enzyme E2 2 OS=Dictyostelium discoideum GN=ubc2 PE=3 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 2.741e-14 Identity = 38/87 (43.68%), Postives = 54/87 (62.07%), Query Frame = -2 Query: 188 PFKPPKVAFRTKVFHPNINSKGSICLDILKE*WSPALTISKVLPSICSLLTDPNPDDPLVPEIAHMYKTDRAKY-----ETTARSWT 433 P P V F +K+FHPN+ + GSICLDIL+ WSP I+ +L SI SLL DPNP+ P E A +++ ++ +Y E +SW+ Sbjct: 64 PNDAPTVKFLSKMFHPNVYADGSICLDILQNQWSPIYDIAAILTSIQSLLCDPNPNSPANSESARLFRENKREYNRKVKEIVEQSWS 150
BLAST of CX306398 vs. ExPASy Swiss-Prot
Match: UBC4_ARATH (Ubiquitin-conjugating enzyme E2 4 OS=Arabidopsis thaliana GN=UBC4 PE=2 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 3.580e-14 Identity = 38/93 (40.86%), Postives = 53/93 (56.99%), Query Frame = -2 Query: 161 PFKPPKVAFRTKVFHPNINS-KGSICLDILKE*WSPALTISKVLPSIC-SLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYAMG*EG 433 P+K P V F TK++HPN++ GS+CLD++ + WSP + V + LL PNP DPL E A + DR YE + + +KYA EG Sbjct: 60 PYKSPSVGFITKIYHPNVDELSGSVCLDVINQTWSPMFDLVNVFETFLPQLLLYPNPSDPLNGEAAALMMRDRPAYEQRVKEYCEKYAKPGEG 152
BLAST of CX306398 vs. ExPASy Swiss-Prot
Match: UBC12_XENTR (NEDD8-conjugating enzyme Ubc12 OS=Xenopus tropicalis GN=ube2m PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 4.676e-14 Identity = 33/75 (44.00%), Postives = 50/75 (66.67%), Query Frame = -2 Query: 209 PFKPPKVAFRTKVFHPNINSKGSICLDILKE*WSPALTISKVLPSICSLLTDPNPDDPLVPEIAHMYKTDRAKYE 433 P PPKV T V+HPNI+ +G++CL+IL+E W P LTI+ ++ + L +PNP+DPL E A + + +R +E Sbjct: 87 PHDPPKVKCETMVYHPNIDLEGNVCLNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFE 161
BLAST of CX306398 vs. ExPASy Swiss-Prot
Match: UBC12_XENLA (NEDD8-conjugating enzyme Ubc12 OS=Xenopus laevis GN=ube2m PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 4.676e-14 Identity = 33/75 (44.00%), Postives = 50/75 (66.67%), Query Frame = -2 Query: 209 PFKPPKVAFRTKVFHPNINSKGSICLDILKE*WSPALTISKVLPSICSLLTDPNPDDPLVPEIAHMYKTDRAKYE 433 P PPKV T V+HPNI+ +G++CL+IL+E W P LTI+ ++ + L +PNP+DPL E A + + +R +E Sbjct: 87 PHDPPKVKCETMVYHPNIDLEGNVCLNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFE 161
BLAST of CX306398 vs. ExPASy Swiss-Prot
Match: UBC12_MOUSE (NEDD8-conjugating enzyme Ubc12 OS=Mus musculus GN=Ube2m PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 4.676e-14 Identity = 33/75 (44.00%), Postives = 50/75 (66.67%), Query Frame = -2 Query: 209 PFKPPKVAFRTKVFHPNINSKGSICLDILKE*WSPALTISKVLPSICSLLTDPNPDDPLVPEIAHMYKTDRAKYE 433 P PPKV T V+HPNI+ +G++CL+IL+E W P LTI+ ++ + L +PNP+DPL E A + + +R +E Sbjct: 87 PHDPPKVKCETMVYHPNIDLEGNVCLNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFE 161 The following BLAST results are available for this feature:
BLAST of CX306398 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 182
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Sequences
The
following sequences are available for this feature:
EST sequence >CX306398 ID=CX306398; Name=CX306398; organism=Citrus clementina; type=EST; length=434bpback to top |