CX306398
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX306398 vs. ExPASy Swiss-Prot
Match: UBE2H_BOVIN (Ubiquitin-conjugating enzyme E2 H OS=Bos taurus GN=UBE2H PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 9.751e-12 Identity = 33/88 (37.50%), Postives = 52/88 (59.09%), Query Frame = -2 Query: 176 PFKPPKVAFRTKVFHPNIN-SKGSICLDILKE*WSPALTISKVLPS-ICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYA 433 PFK P + F K+FHPNI+ + G++CLD++ + W+ ++ + S + LL PNP DPL + A MY +Y+ + + QKYA Sbjct: 62 PFKSPSIGFMNKIFHPNIDEASGTVCLDVINQTWTALYDLTNIFESFLPQLLAYPNPIDPLNGDAAAMYLHRPEEYKQKIKEYIQKYA 149
BLAST of CX306398 vs. ExPASy Swiss-Prot
Match: UBE2C_XENLA (Ubiquitin-conjugating enzyme E2 C OS=Xenopus laevis GN=ube2c PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 9.751e-12 Identity = 32/72 (44.44%), Postives = 45/72 (62.50%), Query Frame = -2 Query: 218 PFKPPKVAFRTKVFHPNINSKGSICLDILKE*WSPALTISKVLPSICSLLTDPNPDDPLVPEIAHMYKTDRA 433 P+ P V F T FHPN++S G+ICLDILK+ WS + +L S+ SLL +PN + PL P A +++ A Sbjct: 90 PYNAPTVKFVTPCFHPNVDSHGNICLDILKDKWSALYDVRTILLSLQSLLGEPNNESPLNPYAAELWQNQTA 161
BLAST of CX306398 vs. ExPASy Swiss-Prot
Match: UBCX_DICDI (Ubiquitin-conjugating enzyme E2 pex4 OS=Dictyostelium discoideum GN=pex4 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 9.751e-12 Identity = 36/87 (41.38%), Postives = 53/87 (60.92%), Query Frame = -2 Query: 179 PFKPPKVAFRTKVFHPNINSK-GSICLDILKE*WSPALTISKVLPSICSLLTDPNPDDPLVPEIAHMYKTDRAK-YETTARSWTQKY 433 P +PP + F TK+FHPNI+ K G ICLD+LK WS T+ V SI +LL+ P D PL + ++ + K +++ AR +T+ Y Sbjct: 61 PLQPPTIKFVTKIFHPNIHFKTGEICLDLLKTSWSAIYTLQSVCRSIIALLSLPEADSPLNCDAGNLIRNGDVKGHDSLARMYTRLY 147
BLAST of CX306398 vs. ExPASy Swiss-Prot
Match: UBC9_CAEEL (SUMO-conjugating enzyme UBC9 OS=Caenorhabditis elegans GN=ubc-9 PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 9.751e-12 Identity = 34/88 (38.64%), Postives = 49/88 (55.68%), Query Frame = -2 Query: 176 PFKPPKVAFRTKVFHPNINSKGSICLDILKE*--WSPALTISKVLPSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYA 433 P PPK F +FHPN+ G++CL +L E W P+++I ++L I LL PN +DP E +Y +RA+YE + KYA Sbjct: 69 PSTPPKCKFEPPLFHPNVYPSGTVCLSLLDENKDWKPSISIKQLLIGIQDLLNHPNIEDPAQAEAYQIYCQNRAEYEKRVKKEAVKYA 156
BLAST of CX306398 vs. ExPASy Swiss-Prot
Match: UBC11_SCHPO (Ubiquitin-conjugating enzyme E2-20 kDa OS=Schizosaccharomyces pombe GN=ubc11 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 9.751e-12 Identity = 29/75 (38.67%), Postives = 47/75 (62.67%), Query Frame = -2 Query: 209 PFKPPKVAFRTKVFHPNINSKGSICLDILKE*WSPALTISKVLPSICSLLTDPNPDDPLVPEIAHMYKTDRAKYE 433 P+ PP + F + ++HPN++ G+ICLDILK+ WS + +L S+ SLL +PN PL + A ++ D +Y+ Sbjct: 89 PYSPPTIIFTSPMWHPNVDMSGNICLDILKDKWSAVYNVQTILLSLQSLLGEPNNASPLNAQAAELWSKDPIEYK 163
BLAST of CX306398 vs. ExPASy Swiss-Prot
Match: UBE2C_MOUSE (Ubiquitin-conjugating enzyme E2 C OS=Mus musculus GN=Ube2c PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.273e-11 Identity = 32/72 (44.44%), Postives = 45/72 (62.50%), Query Frame = -2 Query: 218 PFKPPKVAFRTKVFHPNINSKGSICLDILKE*WSPALTISKVLPSICSLLTDPNPDDPLVPEIAHMYKTDRA 433 P+ P V F T +HPN++++G+ICLDILK+ WS + +L SI SLL +PN D PL A ++K A Sbjct: 90 PYNAPTVKFLTPCYHPNVDTQGNICLDILKDKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAELWKNPTA 161
BLAST of CX306398 vs. ExPASy Swiss-Prot
Match: UBE2C_MACFA (Ubiquitin-conjugating enzyme E2 C OS=Macaca fascicularis GN=UBE2C PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.273e-11 Identity = 32/72 (44.44%), Postives = 45/72 (62.50%), Query Frame = -2 Query: 218 PFKPPKVAFRTKVFHPNINSKGSICLDILKE*WSPALTISKVLPSICSLLTDPNPDDPLVPEIAHMYKTDRA 433 P+ P V F T +HPN++++G+ICLDILK+ WS + +L SI SLL +PN D PL A ++K A Sbjct: 90 PYNAPTVKFLTPCYHPNVDTQGNICLDILKDKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAELWKNPTA 161
BLAST of CX306398 vs. ExPASy Swiss-Prot
Match: UBE2C_BOVIN (Ubiquitin-conjugating enzyme E2 C OS=Bos taurus GN=UBE2C PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.273e-11 Identity = 32/72 (44.44%), Postives = 45/72 (62.50%), Query Frame = -2 Query: 218 PFKPPKVAFRTKVFHPNINSKGSICLDILKE*WSPALTISKVLPSICSLLTDPNPDDPLVPEIAHMYKTDRA 433 P+ P V F T +HPN++++G+ICLDILK+ WS + +L SI SLL +PN D PL A ++K A Sbjct: 90 PYNAPTVKFLTPCYHPNVDTQGNICLDILKDKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAELWKNPTA 161
BLAST of CX306398 vs. ExPASy Swiss-Prot
Match: UBC19_ARATH (Ubiquitin carrier protein E2 19 OS=Arabidopsis thaliana GN=UBC19 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.273e-11 Identity = 33/67 (49.25%), Postives = 44/67 (65.67%), Query Frame = -2 Query: 233 PFKPPKVAFRTKVFHPNINSKGSICLDILKE*WSPALTISKVLPSICSLLTDPNPDDPLVPEIAHMY 433 PFK PKV F T FHPN++ G+ICLDIL++ WS A + +L SI SLL +PN PL + A ++ Sbjct: 96 PFKSPKVKFETCCFHPNVDLYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNNQAAQLW 162
BLAST of CX306398 vs. ExPASy Swiss-Prot
Match: UBE2S_DROVI (Ubiquitin-conjugating enzyme E2 S OS=Drosophila virilis GN=GJ15767 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.663e-11 Identity = 36/86 (41.86%), Postives = 46/86 (53.49%), Query Frame = -2 Query: 176 PFKPPKVAFRTKVFHPNINSKGSICLDILKE*WSPALTISKVLPSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYA 433 P PPK F TK+FHPN+ S G IC++ LK+ W P L I +L +I LL PNP+ L E M Y AR T+ +A Sbjct: 74 PQTPPKAYFLTKIFHPNVASNGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEEAGKMLLERYDDYSQRARMMTEIHA 159 The following BLAST results are available for this feature:
BLAST of CX306398 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 182
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Sequences
The
following sequences are available for this feature:
EST sequence >CX306398 ID=CX306398; Name=CX306398; organism=Citrus clementina; type=EST; length=434bpback to top |