CX306398
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX306398 vs. ExPASy Swiss-Prot
Match: UBC2_CAEEL (Ubiquitin-conjugating enzyme E2 2 OS=Caenorhabditis elegans GN=let-70 PE=1 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 4.347e-36 Identity = 69/87 (79.31%), Postives = 75/87 (86.21%), Query Frame = -2 Query: 173 PFKPPKVAFRTKVFHPNINSKGSICLDILKE*WSPALTISKVLPSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYAM 433 PFKPPKVAF T+++HPNINS GSICLDIL+ WSPALTISKVL SICSLL DPNPDDPLVPEIA +YKTDR +Y AR WTQKYAM Sbjct: 61 PFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRERYNQLAREWTQKYAM 147
BLAST of CX306398 vs. ExPASy Swiss-Prot
Match: UBCD1_DROME (Ubiquitin-conjugating enzyme E2-17 kDa OS=Drosophila melanogaster GN=eff PE=1 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 5.677e-36 Identity = 69/87 (79.31%), Postives = 75/87 (86.21%), Query Frame = -2 Query: 173 PFKPPKVAFRTKVFHPNINSKGSICLDILKE*WSPALTISKVLPSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYAM 433 PFKPPKVAF T+++HPNINS GSICLDIL+ WSPALTISKVL SICSLL DPNPDDPLVPEIA +YKTDR KY AR WT+KYAM Sbjct: 61 PFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELAREWTRKYAM 147
BLAST of CX306398 vs. ExPASy Swiss-Prot
Match: UB2D3_RAT (Ubiquitin-conjugating enzyme E2 D3 OS=Rattus norvegicus GN=Ube2d3 PE=2 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 5.677e-36 Identity = 69/87 (79.31%), Postives = 75/87 (86.21%), Query Frame = -2 Query: 173 PFKPPKVAFRTKVFHPNINSKGSICLDILKE*WSPALTISKVLPSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYAM 433 PFKPPKVAF T+++HPNINS GSICLDIL+ WSPALTISKVL SICSLL DPNPDDPLVPEIA +YKTDR KY +R WTQKYAM Sbjct: 61 PFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRDKYNRISREWTQKYAM 147
BLAST of CX306398 vs. ExPASy Swiss-Prot
Match: UB2D3_PONAB (Ubiquitin-conjugating enzyme E2 D3 OS=Pongo abelii GN=UBE2D3 PE=2 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 5.677e-36 Identity = 69/87 (79.31%), Postives = 75/87 (86.21%), Query Frame = -2 Query: 173 PFKPPKVAFRTKVFHPNINSKGSICLDILKE*WSPALTISKVLPSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYAM 433 PFKPPKVAF T+++HPNINS GSICLDIL+ WSPALTISKVL SICSLL DPNPDDPLVPEIA +YKTDR KY +R WTQKYAM Sbjct: 61 PFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRDKYNRISREWTQKYAM 147
BLAST of CX306398 vs. ExPASy Swiss-Prot
Match: UB2D3_MOUSE (Ubiquitin-conjugating enzyme E2 D3 OS=Mus musculus GN=Ube2d3 PE=2 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 5.677e-36 Identity = 69/87 (79.31%), Postives = 75/87 (86.21%), Query Frame = -2 Query: 173 PFKPPKVAFRTKVFHPNINSKGSICLDILKE*WSPALTISKVLPSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYAM 433 PFKPPKVAF T+++HPNINS GSICLDIL+ WSPALTISKVL SICSLL DPNPDDPLVPEIA +YKTDR KY +R WTQKYAM Sbjct: 61 PFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRDKYNRISREWTQKYAM 147
BLAST of CX306398 vs. ExPASy Swiss-Prot
Match: UB2D3_MACFA (Ubiquitin-conjugating enzyme E2 D3 OS=Macaca fascicularis GN=UBE2D3 PE=2 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 5.677e-36 Identity = 69/87 (79.31%), Postives = 75/87 (86.21%), Query Frame = -2 Query: 173 PFKPPKVAFRTKVFHPNINSKGSICLDILKE*WSPALTISKVLPSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYAM 433 PFKPPKVAF T+++HPNINS GSICLDIL+ WSPALTISKVL SICSLL DPNPDDPLVPEIA +YKTDR KY +R WTQKYAM Sbjct: 61 PFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRDKYNRISREWTQKYAM 147
BLAST of CX306398 vs. ExPASy Swiss-Prot
Match: UB2D3_HUMAN (Ubiquitin-conjugating enzyme E2 D3 OS=Homo sapiens GN=UBE2D3 PE=1 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 5.677e-36 Identity = 69/87 (79.31%), Postives = 75/87 (86.21%), Query Frame = -2 Query: 173 PFKPPKVAFRTKVFHPNINSKGSICLDILKE*WSPALTISKVLPSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYAM 433 PFKPPKVAF T+++HPNINS GSICLDIL+ WSPALTISKVL SICSLL DPNPDDPLVPEIA +YKTDR KY +R WTQKYAM Sbjct: 61 PFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRDKYNRISREWTQKYAM 147
BLAST of CX306398 vs. ExPASy Swiss-Prot
Match: UB2D2_PIG (Ubiquitin-conjugating enzyme E2 D2 OS=Sus scrofa GN=UBE2D2 PE=2 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 5.677e-36 Identity = 69/87 (79.31%), Postives = 75/87 (86.21%), Query Frame = -2 Query: 173 PFKPPKVAFRTKVFHPNINSKGSICLDILKE*WSPALTISKVLPSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYAM 433 PFKPPKVAF T+++HPNINS GSICLDIL+ WSPALTISKVL SICSLL DPNPDDPLVPEIA +YKTDR KY +R WTQKYAM Sbjct: 61 PFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRDKYNRISREWTQKYAM 147
BLAST of CX306398 vs. ExPASy Swiss-Prot
Match: UBC4_CANAL (Ubiquitin-conjugating enzyme E2 4 OS=Candida albicans GN=UBC4 PE=2 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 1.265e-35 Identity = 67/87 (77.01%), Postives = 76/87 (87.36%), Query Frame = -2 Query: 173 PFKPPKVAFRTKVFHPNINSKGSICLDILKE*WSPALTISKVLPSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYAM 433 P KPPK+A TK++HPNINS G+ICLDILK+ WSPALTISKVL SICSLLTD NPDDPLVPEIAH+YK DR KYE TA+ WT+KYA+ Sbjct: 61 PLKPPKIALTTKIYHPNINSNGNICLDILKDQWSPALTISKVLLSICSLLTDANPDDPLVPEIAHIYKQDRKKYEATAKEWTKKYAV 147
BLAST of CX306398 vs. ExPASy Swiss-Prot
Match: UB2D1_MOUSE (Ubiquitin-conjugating enzyme E2 D1 OS=Mus musculus GN=Ube2d1 PE=2 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 2.817e-35 Identity = 66/87 (75.86%), Postives = 75/87 (86.21%), Query Frame = -2 Query: 173 PFKPPKVAFRTKVFHPNINSKGSICLDILKE*WSPALTISKVLPSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYAM 433 PFKPPK+AF TK++HPNINS GSICLDIL+ WSPALT+SKVL SICSLL DPNPDDPLVP+IA +YK+D+ KY AR WTQKYAM Sbjct: 61 PFKPPKIAFTTKIYHPNINSNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDDPLVPDIAQIYKSDKEKYNRHAREWTQKYAM 147 The following BLAST results are available for this feature:
BLAST of CX306398 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 182
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Sequences
The
following sequences are available for this feature:
EST sequence >CX306398 ID=CX306398; Name=CX306398; organism=Citrus clementina; type=EST; length=434bpback to top |