CX306398
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX306398 vs. ExPASy Swiss-Prot
Match: UB2D1_HUMAN (Ubiquitin-conjugating enzyme E2 D1 OS=Homo sapiens GN=UBE2D1 PE=1 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 2.817e-35 Identity = 66/87 (75.86%), Postives = 75/87 (86.21%), Query Frame = -2 Query: 173 PFKPPKVAFRTKVFHPNINSKGSICLDILKE*WSPALTISKVLPSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYAM 433 PFKPPK+AF TK++HPNINS GSICLDIL+ WSPALT+SKVL SICSLL DPNPDDPLVP+IA +YK+D+ KY AR WTQKYAM Sbjct: 61 PFKPPKIAFTTKIYHPNINSNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDDPLVPDIAQIYKSDKEKYNRHAREWTQKYAM 147
BLAST of CX306398 vs. ExPASy Swiss-Prot
Match: UB2D1_BOVIN (Ubiquitin-conjugating enzyme E2 D1 OS=Bos taurus GN=UBE2D1 PE=2 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 2.817e-35 Identity = 66/87 (75.86%), Postives = 75/87 (86.21%), Query Frame = -2 Query: 173 PFKPPKVAFRTKVFHPNINSKGSICLDILKE*WSPALTISKVLPSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYAM 433 PFKPPK+AF TK++HPNINS GSICLDIL+ WSPALT+SKVL SICSLL DPNPDDPLVP+IA +YK+D+ KY AR WTQKYAM Sbjct: 61 PFKPPKIAFTTKIYHPNINSNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDDPLVPDIAQIYKSDKEKYNRHAREWTQKYAM 147
BLAST of CX306398 vs. ExPASy Swiss-Prot
Match: UB2D3_BOVIN (Ubiquitin-conjugating enzyme E2 D3 OS=Bos taurus GN=UBE2D3 PE=2 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 3.680e-35 Identity = 68/87 (78.16%), Postives = 74/87 (85.06%), Query Frame = -2 Query: 173 PFKPPKVAFRTKVFHPNINSKGSICLDILKE*WSPALTISKVLPSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYAM 433 PFKPPKVAF T+++HPNINS SICLDIL+ WSPALTISKVL SICSLL DPNPDDPLVPEIA +YKTDR KY +R WTQKYAM Sbjct: 61 PFKPPKVAFTTRIYHPNINSNDSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRDKYNRISREWTQKYAM 147
BLAST of CX306398 vs. ExPASy Swiss-Prot
Match: U2D2B_RAT (Ubiquitin-conjugating enzyme E2 D2B OS=Rattus norvegicus GN=Ube2d2b PE=2 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 3.680e-35 Identity = 68/87 (78.16%), Postives = 74/87 (85.06%), Query Frame = -2 Query: 173 PFKPPKVAFRTKVFHPNINSKGSICLDILKE*WSPALTISKVLPSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYAM 433 PFKPPKV F T+++HPN+NS GSICLDIL+ WSPALTISKVL SI SLL DPNPDDPLVPEIA +YKTDR KY TAR WTQKYAM Sbjct: 61 PFKPPKVEFTTRIYHPNVNSNGSICLDILRSQWSPALTISKVLLSISSLLCDPNPDDPLVPEIAQIYKTDRDKYNRTAREWTQKYAM 147
BLAST of CX306398 vs. ExPASy Swiss-Prot
Match: U2D2B_MOUSE (Ubiquitin-conjugating enzyme E2 D2B OS=Mus musculus GN=Ube2d2b PE=2 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 3.680e-35 Identity = 68/87 (78.16%), Postives = 74/87 (85.06%), Query Frame = -2 Query: 173 PFKPPKVAFRTKVFHPNINSKGSICLDILKE*WSPALTISKVLPSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYAM 433 PFKPPKV F T+++HPN+NS GSICLDIL+ WSPALTISKVL SI SLL DPNPDDPLVPEIA +YKTDR KY TAR WTQKYAM Sbjct: 61 PFKPPKVEFTTRIYHPNVNSNGSICLDILRSQWSPALTISKVLLSISSLLCDPNPDDPLVPEIAQIYKTDRDKYNRTAREWTQKYAM 147
BLAST of CX306398 vs. ExPASy Swiss-Prot
Match: UB2E2_MOUSE (Ubiquitin-conjugating enzyme E2 E2 OS=Mus musculus GN=Ube2e2 PE=2 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 3.017e-29 Identity = 60/86 (69.77%), Postives = 71/86 (82.56%), Query Frame = -2 Query: 176 PFKPPKVAFRTKVFHPNINSKGSICLDILKE*WSPALTISKVLPSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYA 433 PFKPPKV FRT+++H NINS+G ICLDILK+ WSPALTISKVL SICSLLTD NP DPLV IA Y T+RA+++ AR WT++YA Sbjct: 115 PFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYMTNRAEHDRMARQWTKRYA 200
BLAST of CX306398 vs. ExPASy Swiss-Prot
Match: UB2E2_HUMAN (Ubiquitin-conjugating enzyme E2 E2 OS=Homo sapiens GN=UBE2E2 PE=1 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 3.017e-29 Identity = 60/86 (69.77%), Postives = 71/86 (82.56%), Query Frame = -2 Query: 176 PFKPPKVAFRTKVFHPNINSKGSICLDILKE*WSPALTISKVLPSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYA 433 PFKPPKV FRT+++H NINS+G ICLDILK+ WSPALTISKVL SICSLLTD NP DPLV IA Y T+RA+++ AR WT++YA Sbjct: 115 PFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYMTNRAEHDRMARQWTKRYA 200
BLAST of CX306398 vs. ExPASy Swiss-Prot
Match: UB2E1_MOUSE (Ubiquitin-conjugating enzyme E2 E1 OS=Mus musculus GN=Ube2e1 PE=2 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 3.017e-29 Identity = 60/86 (69.77%), Postives = 71/86 (82.56%), Query Frame = -2 Query: 176 PFKPPKVAFRTKVFHPNINSKGSICLDILKE*WSPALTISKVLPSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYA 433 PFKPPKV FRT+++H NINS+G ICLDILK+ WSPALTISKVL SICSLLTD NP DPLV IA Y T+RA+++ AR WT++YA Sbjct: 107 PFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYMTNRAEHDRMARQWTKRYA 192
BLAST of CX306398 vs. ExPASy Swiss-Prot
Match: UB2E1_HUMAN (Ubiquitin-conjugating enzyme E2 E1 OS=Homo sapiens GN=UBE2E1 PE=1 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 3.017e-29 Identity = 60/86 (69.77%), Postives = 71/86 (82.56%), Query Frame = -2 Query: 176 PFKPPKVAFRTKVFHPNINSKGSICLDILKE*WSPALTISKVLPSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYA 433 PFKPPKV FRT+++H NINS+G ICLDILK+ WSPALTISKVL SICSLLTD NP DPLV IA Y T+RA+++ AR WT++YA Sbjct: 107 PFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYMTNRAEHDRMARQWTKRYA 192
BLAST of CX306398 vs. ExPASy Swiss-Prot
Match: UB2E3_MOUSE (Ubiquitin-conjugating enzyme E2 E3 OS=Mus musculus GN=Ube2e3 PE=1 SV=2) HSP 1 Score: 126.716 bits (317), Expect = 3.940e-29 Identity = 60/86 (69.77%), Postives = 71/86 (82.56%), Query Frame = -2 Query: 176 PFKPPKVAFRTKVFHPNINSKGSICLDILKE*WSPALTISKVLPSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYA 433 PFKPPKV FRT+++H NINS+G ICLDILK+ WSPALTISKVL SICSLLTD NP DPLV IA Y T+RA+++ AR WT++YA Sbjct: 121 PFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYLTNRAEHDRIARQWTKRYA 206 The following BLAST results are available for this feature:
BLAST of CX306398 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 182
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Sequences
The
following sequences are available for this feature:
EST sequence >CX306398 ID=CX306398; Name=CX306398; organism=Citrus clementina; type=EST; length=434bpback to top |