CX306398
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX306398 vs. ExPASy Swiss-Prot
Match: UBC13_SCHPO (Ubiquitin-conjugating enzyme E2 13 OS=Schizosaccharomyces pombe GN=ubc13 PE=1 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 6.306e-19 Identity = 43/87 (49.43%), Postives = 58/87 (66.67%), Query Frame = -2 Query: 173 PFKPPKVAFRTKVFHPNINSKGSICLDILKE*WSPALTISKVLPSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYAM 433 P PP V F TK++HPN++ G ICL LK+ WSPAL I VL SI +L+ PNPDDPL ++A ++K + + AR WT+KYA+ Sbjct: 62 PMMPPNVRFLTKIYHPNVDKLGRICLSTLKKDWSPALQIRTVLLSIQALMGAPNPDDPLDNDVAKIWKENEPQAIANAREWTKKYAV 148
BLAST of CX306398 vs. ExPASy Swiss-Prot
Match: UBC27_ARATH (Ubiquitin carrier protein E2 27 OS=Arabidopsis thaliana GN=UBC27 PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 8.235e-19 Identity = 45/87 (51.72%), Postives = 61/87 (70.11%), Query Frame = -2 Query: 176 PFKPPKVAFRTKVFHPNINSK-GSICLDILKE*WSPALTISKVLPSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYA 433 PF+PPK+ F TKV+HPNI+S+ G+ICLDILK+ WSPALT+ L SI +LL+ P P DP +A Y + + +TAR WT+ +A Sbjct: 63 PFEPPKMQFSTKVWHPNISSQSGAICLDILKDQWSPALTLKTALVSIQALLSAPEPKDPQDAVVAEQYMKNYQVFVSTARYWTETFA 149
BLAST of CX306398 vs. ExPASy Swiss-Prot
Match: UBC37_ARATH (Probable ubiquitin carrier protein E2 37 OS=Arabidopsis thaliana GN=UBC37 PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 1.405e-18 Identity = 45/90 (50.00%), Postives = 62/90 (68.89%), Query Frame = -2 Query: 176 PFKPPKVAFRTKVFHPNINSKGSICLDIL----KE*WSPALTISKVLPSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYA 433 PF+PP V+F T ++HPNI++ G ICLDIL K W P+L IS VL S+ LL++PNPDD L+ E++ YK +R ++ AR T+KYA Sbjct: 75 PFQPPIVSFATPIYHPNIDNSGRICLDILNLPPKGAWQPSLNISTVLTSMRLLLSEPNPDDGLMCEVSREYKYNRQTFDYKAREMTEKYA 164
BLAST of CX306398 vs. ExPASy Swiss-Prot
Match: UBC1_SCHPO (Ubiquitin-conjugating enzyme E2 1 OS=Schizosaccharomyces pombe GN=ubc1 PE=2 SV=2) HSP 1 Score: 90.8929 bits (224), Expect = 2.396e-18 Identity = 42/93 (45.16%), Postives = 61/93 (65.59%), Query Frame = -2 Query: 158 PFKPPKVAFRTKVFHPNINSK-GSICLDILKE*WSPALTISKVLPSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYAMG*EGL 433 PF+PPK+ F TK++HPN++S+ G+ICLDILK+ WSP T+ L S+ SLL P P +P ++A +Y + ++ TAR WT YA G+ Sbjct: 64 PFRPPKMNFDTKIYHPNVSSQTGAICLDILKDQWSPVYTMKSALISLQSLLCTPEPSNPQDAQVAQVYLQNYQQFVRTAREWTSSYAAAPAGV 156
BLAST of CX306398 vs. ExPASy Swiss-Prot
Match: UB2L3_PONAB (Ubiquitin-conjugating enzyme E2 L3 OS=Pongo abelii GN=UBE2L3 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 4.087e-18 Identity = 38/86 (44.19%), Postives = 57/86 (66.28%), Query Frame = -2 Query: 179 PFKPPKVAFRTKVFHPNINSKGSICLDILK-E*WSPALTISKVLPSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKY 433 PFKPPK+ F+TK++HPNI+ KG +CL ++ E W PA +V+ S+ +L+ DP P+ PL ++A Y DR K+ A +T+KY Sbjct: 62 PFKPPKITFKTKIYHPNIDEKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYSKDRKKFCKNAEEFTKKY 147
BLAST of CX306398 vs. ExPASy Swiss-Prot
Match: UB2L3_MOUSE (Ubiquitin-conjugating enzyme E2 L3 OS=Mus musculus GN=Ube2l3 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 4.087e-18 Identity = 38/86 (44.19%), Postives = 57/86 (66.28%), Query Frame = -2 Query: 179 PFKPPKVAFRTKVFHPNINSKGSICLDILK-E*WSPALTISKVLPSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKY 433 PFKPPK+ F+TK++HPNI+ KG +CL ++ E W PA +V+ S+ +L+ DP P+ PL ++A Y DR K+ A +T+KY Sbjct: 62 PFKPPKITFKTKIYHPNIDEKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYSKDRKKFCKNAEEFTKKY 147
BLAST of CX306398 vs. ExPASy Swiss-Prot
Match: UB2L3_HUMAN (Ubiquitin-conjugating enzyme E2 L3 OS=Homo sapiens GN=UBE2L3 PE=1 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 4.087e-18 Identity = 38/86 (44.19%), Postives = 57/86 (66.28%), Query Frame = -2 Query: 179 PFKPPKVAFRTKVFHPNINSKGSICLDILK-E*WSPALTISKVLPSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKY 433 PFKPPK+ F+TK++HPNI+ KG +CL ++ E W PA +V+ S+ +L+ DP P+ PL ++A Y DR K+ A +T+KY Sbjct: 62 PFKPPKITFKTKIYHPNIDEKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYSKDRKKFCKNAEEFTKKY 147
BLAST of CX306398 vs. ExPASy Swiss-Prot
Match: UB2L3_BOVIN (Ubiquitin-conjugating enzyme E2 L3 OS=Bos taurus GN=UBE2L3 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 4.087e-18 Identity = 38/86 (44.19%), Postives = 57/86 (66.28%), Query Frame = -2 Query: 179 PFKPPKVAFRTKVFHPNINSKGSICLDILK-E*WSPALTISKVLPSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKY 433 PFKPPK+ F+TK++HPNI+ KG +CL ++ E W PA +V+ S+ +L+ DP P+ PL ++A Y DR K+ A +T+KY Sbjct: 62 PFKPPKITFKTKIYHPNIDEKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYSKDRKKFCKNAEEFTKKY 147
BLAST of CX306398 vs. ExPASy Swiss-Prot
Match: UBE2T_MOUSE (Ubiquitin-conjugating enzyme E2 T OS=Mus musculus GN=Ube2t PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 5.338e-18 Identity = 42/90 (46.67%), Postives = 61/90 (67.78%), Query Frame = -2 Query: 176 PFKPPKVAFRTKVFHPNINSKGSICLDILK----E*WSPALTISKVLPSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYA 433 PF+PP+V F T ++HPNI+S G ICLDILK W P+L I+ VL SI L+ +PNPDDPL+ +I+ +K ++ + A+ WT+ +A Sbjct: 62 PFEPPQVRFLTPIYHPNIDSSGRICLDILKLPPKGAWRPSLNIATVLTSIQLLMAEPNPDDPLMADISSEFKYNKIAFLKKAKQWTEAHA 151
BLAST of CX306398 vs. ExPASy Swiss-Prot
Match: UBE2T_BOVIN (Ubiquitin-conjugating enzyme E2 T OS=Bos taurus GN=UBE2T PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 5.338e-18 Identity = 40/90 (44.44%), Postives = 61/90 (67.78%), Query Frame = -2 Query: 176 PFKPPKVAFRTKVFHPNINSKGSICLDILK----E*WSPALTISKVLPSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYA 433 PF+PP++ F T ++HPNI+S G ICLD+LK W P+L I+ +L I L+ +PNPDDPL+ +I+ +K ++ + AR WT+K+A Sbjct: 62 PFEPPQIRFLTPIYHPNIDSAGRICLDVLKLPPKGAWRPSLNIATLLTCIQQLMAEPNPDDPLMADISSEFKYNKPVFFKNARQWTEKHA 151 The following BLAST results are available for this feature:
BLAST of CX306398 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 182
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Sequences
The
following sequences are available for this feature:
EST sequence >CX306398 ID=CX306398; Name=CX306398; organism=Citrus clementina; type=EST; length=434bpback to top |