CX306398
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX306398 vs. ExPASy Swiss-Prot
Match: UBC14_SCHPO (Ubiquitin-conjugating enzyme E2 14 OS=Schizosaccharomyces pombe GN=ubc14 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 5.338e-18 Identity = 38/87 (43.68%), Postives = 60/87 (68.97%), Query Frame = -2 Query: 176 PFKPPKVAFRTKVFHPNINSKGSICLDILKE*-WSPALTISKVLPSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYA 433 PF+PP + F T+++HPN +S+G++CL ILK+ + P++ + VL I LL +PNPDDPLV IA Y+ DR ++ AR + +++A Sbjct: 67 PFQPPTIEFTTRIYHPNFDSEGNVCLAILKQQVFKPSIKLRSVLEQILQLLREPNPDDPLVASIAEQYRNDRPSFDKIARDYVEQFA 153
BLAST of CX306398 vs. ExPASy Swiss-Prot
Match: UBC13_YEAST (Ubiquitin-conjugating enzyme E2 13 OS=Saccharomyces cerevisiae GN=UBC13 PE=1 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 5.338e-18 Identity = 43/86 (50.00%), Postives = 56/86 (65.12%), Query Frame = -2 Query: 176 PFKPPKVAFRTKVFHPNINSKGSICLDILKE*WSPALTISKVLPSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYA 433 P + PKV F TK++HPNI+ G ICLD+LK WSPAL I VL SI +LL PNP+DPL ++A + + + AR WT+ YA Sbjct: 63 PMEAPKVRFLTKIYHPNIDRLGRICLDVLKTNWSPALQIRTVLLSIQALLASPNPNDPLANDVAEDWIKNEQGAKAKAREWTKLYA 148
BLAST of CX306398 vs. ExPASy Swiss-Prot
Match: UBE2K_MOUSE (Ubiquitin-conjugating enzyme E2 K OS=Mus musculus GN=Ube2k PE=2 SV=3) HSP 1 Score: 87.4261 bits (215), Expect = 2.649e-17 Identity = 43/87 (49.43%), Postives = 58/87 (66.67%), Query Frame = -2 Query: 176 PFKPPKVAFRTKVFHPNINS-KGSICLDILKE*WSPALTISKVLPSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYA 433 PF PPKV F TK++HPNI+S G+ICLDILK+ W+ A+T+ VL S+ +LL PDDP +A+ YK + ++ TAR W YA Sbjct: 67 PFNPPKVRFITKIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYA 153
BLAST of CX306398 vs. ExPASy Swiss-Prot
Match: UBE2K_HUMAN (Ubiquitin-conjugating enzyme E2 K OS=Homo sapiens GN=UBE2K PE=1 SV=3) HSP 1 Score: 87.4261 bits (215), Expect = 2.649e-17 Identity = 43/87 (49.43%), Postives = 58/87 (66.67%), Query Frame = -2 Query: 176 PFKPPKVAFRTKVFHPNINS-KGSICLDILKE*WSPALTISKVLPSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYA 433 PF PPKV F TK++HPNI+S G+ICLDILK+ W+ A+T+ VL S+ +LL PDDP +A+ YK + ++ TAR W YA Sbjct: 67 PFNPPKVRFITKIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYA 153
BLAST of CX306398 vs. ExPASy Swiss-Prot
Match: UBE2K_BOVIN (Ubiquitin-conjugating enzyme E2 K OS=Bos taurus GN=UBE2K PE=1 SV=3) HSP 1 Score: 87.4261 bits (215), Expect = 2.649e-17 Identity = 43/87 (49.43%), Postives = 58/87 (66.67%), Query Frame = -2 Query: 176 PFKPPKVAFRTKVFHPNINS-KGSICLDILKE*WSPALTISKVLPSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYA 433 PF PPKV F TK++HPNI+S G+ICLDILK+ W+ A+T+ VL S+ +LL PDDP +A+ YK + ++ TAR W YA Sbjct: 67 PFNPPKVRFITKIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYA 153
BLAST of CX306398 vs. ExPASy Swiss-Prot
Match: UBCD6_DROME (Ubiquitin-conjugating enzyme E2-17 kDa OS=Drosophila melanogaster GN=UbcD6 PE=2 SV=2) HSP 1 Score: 87.0409 bits (214), Expect = 3.460e-17 Identity = 40/84 (47.62%), Postives = 55/84 (65.48%), Query Frame = -2 Query: 182 PFKPPKVAFRTKVFHPNINSKGSICLDILKE*WSPALTISKVLPSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQK 433 P KPP V F +KVFHPN+ + G ICLDIL+ WSP +S +L SI SLL+DPNP+ P A +YK +R +YE ++ ++ Sbjct: 64 PNKPPTVRFVSKVFHPNVYADGGICLDILQNRWSPTYDVSAILTSIQSLLSDPNPNSPANSTAAQLYKENRREYEKRVKACVEQ 147
BLAST of CX306398 vs. ExPASy Swiss-Prot
Match: UBC2_WHEAT (Ubiquitin-conjugating enzyme E2 2 OS=Triticum aestivum GN=UBC2 PE=1 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 1.007e-16 Identity = 42/87 (48.28%), Postives = 55/87 (63.22%), Query Frame = -2 Query: 188 PFKPPKVAFRTKVFHPNINSKGSICLDILKE*WSPALTISKVLPSICSLLTDPNPDDPLVPEIAHMYKTDRAKY-----ETTARSWT 433 P KPP V F +++FHPNI + GSICLDIL+ WSP ++ +L SI SLL DPNP+ P E A MY ++ +Y E +SWT Sbjct: 64 PNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMYSENKREYNRKVREVVEQSWT 150
BLAST of CX306398 vs. ExPASy Swiss-Prot
Match: UBCD4_DROME (Ubiquitin-conjugating enzyme E2-22 kDa OS=Drosophila melanogaster GN=UbcD4 PE=1 SV=2) HSP 1 Score: 84.7297 bits (208), Expect = 1.717e-16 Identity = 42/89 (47.19%), Postives = 58/89 (65.17%), Query Frame = -2 Query: 170 PFKPPKVAFRTKVFHPNINS-KGSICLDILKE*WSPALTISKVLPSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYAMG 433 PF PPKV F T+++HPNI+S G+ICLDILK+ W+ A+T+ VL S+ +LL PDDP +A+ +K + TA+ WT YA G Sbjct: 67 PFNPPKVRFITRIWHPNISSVTGAICLDILKDNWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVAYQFKDKYDLFLLTAKHWTNAYAGG 155
BLAST of CX306398 vs. ExPASy Swiss-Prot
Match: UBC1_ARATH (Ubiquitin-conjugating enzyme E2 1 OS=Arabidopsis thaliana GN=UBC1 PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 2.243e-16 Identity = 42/87 (48.28%), Postives = 53/87 (60.92%), Query Frame = -2 Query: 188 PFKPPKVAFRTKVFHPNINSKGSICLDILKE*WSPALTISKVLPSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTAR-----SWT 433 P KPP V F +++FHPNI + GSICLDIL+ WSP ++ +L SI SLL DPNP+ P E A MY + +Y R SWT Sbjct: 64 PNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMYSESKREYNRRVRDVVEQSWT 150
BLAST of CX306398 vs. ExPASy Swiss-Prot
Match: UBC2_MEDSA (Ubiquitin-conjugating enzyme E2 2 OS=Medicago sativa GN=UBC2 PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 2.929e-16 Identity = 41/87 (47.13%), Postives = 55/87 (63.22%), Query Frame = -2 Query: 188 PFKPPKVAFRTKVFHPNINSKGSICLDILKE*WSPALTISKVLPSICSLLTDPNPDDPLVPEIAHMYKTDRAKY-----ETTARSWT 433 P KPP V F +++FHPNI + GSICLDIL+ WSP ++ +L SI SLL DPNP+ P E A M+ ++ +Y E +SWT Sbjct: 64 PNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREVVEQSWT 150 The following BLAST results are available for this feature:
BLAST of CX306398 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 182
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Sequences
The
following sequences are available for this feature:
EST sequence >CX306398 ID=CX306398; Name=CX306398; organism=Citrus clementina; type=EST; length=434bpback to top |