CX306403
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX306403 vs. ExPASy Swiss-Prot
Match: HSP12_DAUCA (18.0 kDa class I heat shock protein OS=Daucus carota PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 2.465e-33 Identity = 75/141 (53.19%), Postives = 92/141 (65.25%), Query Frame = 1 Query: 85 MSLIPSIFGNR--SVLDPFSSDVWAPL---------GSSSN---EVSTFASAQVDWKETPEAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSVEKEDKNDKWRRVEXXXXXXXXXXXXPENAKIDQVKASMENGVLTVT 465 MS+IPS FG+R +VL+PFS D+W P G+SS E + FA+ +DWKETP+AHVFKADLPGL +G+VLQISGER+ EKE+KN+KW RVE PENA +D+VKA MENGVLTVT Sbjct: 1 MSIIPSFFGSRRSNVLNPFSLDIWDPFQDYPLITSSGTSSEFGKETAAFANTHIDWKETPQAHVFKADLPGLKKEEVKVEVEEGKVLQISGERNKEKEEKNNKWHRVEFSSGKFLRRFRLPENANVDEVKAGMENGVLTVT 141
BLAST of CX306403 vs. ExPASy Swiss-Prot
Match: HSP15_SOYBN (17.6 kDa class I heat shock protein OS=Glycine max GN=HSP17.6-L PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 4.204e-33 Identity = 77/136 (56.62%), Postives = 86/136 (63.24%), Query Frame = 1 Query: 85 MSLIPSIFGN--RSVLDPFSSDVW-------APLGSSSNEVSTFASAQVDWKETPEAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSVEKEDKNDKWRRVEXXXXXXXXXXXXPENAKIDQVKASMENGVLTVT 465 MSLIPSIFG +V DPFS D+W P S S E S F + +VDWKET EAHV KAD+PGL D RVLQISGER+VEKEDKND W RV+ PENAK++QVKA MENGVLTVT Sbjct: 1 MSLIPSIFGGPRSNVFDPFSLDMWDPFKDFHVPTSSVSAENSAFVNTRVDWKETQEAHVLKADIPGLKKEEVKVQIEDDRVLQISGERNVEKEDKNDTWHRVDRSSGKFMRRFRLPENAKVEQVKACMENGVLTVT 136
BLAST of CX306403 vs. ExPASy Swiss-Prot
Match: HS17C_ARATH (17.6 kDa class I heat shock protein 3 OS=Arabidopsis thaliana GN=HSP17.6C PE=2 SV=2) HSP 1 Score: 140.198 bits (352), Expect = 4.204e-33 Identity = 75/139 (53.96%), Postives = 91/139 (65.47%), Query Frame = 1 Query: 85 MSLIPSIFGNR--SVLDPFSSDVWAPL----------GSSSNEVSTFASAQVDWKETPEAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSVEKEDKNDKWRRVEXXXXXXXXXXXXPENAKIDQVKASMENGVLTVT 465 MSLIPSIFG R +V DPFS DV+ P + + +V+ F +A+VDW+ETPEAHVFKADLPGL DG +LQISGERS E E+KNDKW RVE PENAK++++KASMENGVL+VT Sbjct: 1 MSLIPSIFGGRRTNVFDPFSLDVFDPFEGFLTPSGLANAPAMDVAAFTNAKVDWRETPEAHVFKADLPGLRKEEVKVEVEDGNILQISGERSNENEEKNDKWHRVERSSGKFTRRFRLPENAKMEEIKASMENGVLSVT 139
BLAST of CX306403 vs. ExPASy Swiss-Prot
Match: HS178_ARATH (17.8 kDa class I heat shock protein OS=Arabidopsis thaliana GN=HSP17.8 PE=2 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 5.491e-33 Identity = 77/137 (56.20%), Postives = 84/137 (61.31%), Query Frame = 1 Query: 85 MSLIPSIFGNR----SVLDPFSSDVWAPL------GSSSNEVSTFASAQVDWKETPEAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSVEKEDKNDKWRRVEXXXXXXXXXXXXPENAKIDQVKASMENGVLTVT 465 MSLIPS FGN S+ DPFS DVW P S S E S +A+VDWKET EAHVFKADLPG+ D VL+ISGER VEKE+K D W RVE PEN K+DQVKASMENGVLTVT Sbjct: 1 MSLIPSFFGNNRRSNSIFDPFSLDVWDPFKELQFPSSLSGETSAITNARVDWKETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGQFSRKFKLPENVKMDQVKASMENGVLTVT 137
BLAST of CX306403 vs. ExPASy Swiss-Prot
Match: HSP17_ARATH (17.4 kDa class I heat shock protein OS=Arabidopsis thaliana GN=HSP17.4A PE=1 SV=2) HSP 1 Score: 139.428 bits (350), Expect = 7.172e-33 Identity = 72/138 (52.17%), Postives = 89/138 (64.49%), Query Frame = 1 Query: 85 MSLIPSIFGNR--SVLDPFSSDVWAPL---------GSSSNEVSTFASAQVDWKETPEAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSVEKEDKNDKWRRVEXXXXXXXXXXXXPENAKIDQVKASMENGVLTVT 465 MSL+PS FG R +V DPFS DVW P + + +V+ F +A+VDW+ETPEAHVFKAD+PGL DG +LQISGERS E E+K+D W RVE PENAK+++VKASMENGVL+VT Sbjct: 1 MSLVPSFFGGRRTNVFDPFSLDVWDPFEGFLTPGLTNAPAKDVAAFTNAKVDWRETPEAHVFKADVPGLKKEEVKVEVEDGNILQISGERSSENEEKSDTWHRVERSSGKFMRRFRLPENAKVEEVKASMENGVLSVT 138
BLAST of CX306403 vs. ExPASy Swiss-Prot
Match: HSP11_DAUCA (17.8 kDa class I heat shock protein OS=Daucus carota PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 7.172e-33 Identity = 75/139 (53.96%), Postives = 90/139 (64.75%), Query Frame = 1 Query: 85 MSLIPSIFGNR--SVLDPFSSDVWAP-----LGSSS-----NEVSTFASAQVDWKETPEAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSVEKEDKNDKWRRVEXXXXXXXXXXXXPENAKIDQVKASMENGVLTVT 465 MS+IPS FG R +V DPFS DVW P L +SS E + F + +DWKETP+AHVFKADLPGL +G+VLQISGER+ EKE+KNDKW RVE PENAK+D+VKA+M NGV+TVT Sbjct: 1 MSIIPSFFGGRRSNVFDPFSLDVWDPFKDFPLVTSSASEFGKETAAFVNTHIDWKETPQAHVFKADLPGLKKEEVKVELEEGKVLQISGERNKEKEEKNDKWHRVERSSGKFLRRFRLPENAKVDEVKAAMANGVVTVT 139
BLAST of CX306403 vs. ExPASy Swiss-Prot
Match: HS17B_ARATH (17.6 kDa class I heat shock protein 2 OS=Arabidopsis thaliana GN=HSP17.6B PE=2 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 9.366e-33 Identity = 75/135 (55.56%), Postives = 85/135 (62.96%), Query Frame = 1 Query: 85 MSLIPSIFGNR---SVLDPFSSDVWAPL-----GSSSNEVSTFASAQVDWKETPEAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSVEKEDKNDKWRRVEXXXXXXXXXXXXPENAKIDQVKASMENGVLTVT 465 MS+IPS F N ++ DPFS DVW P S S E S +A+VDW+ETPEAHVFKADLPGL + VL+ISGER VEKEDKND W RVE PEN K+DQVKA+MENGVLTVT Sbjct: 1 MSMIPSFFNNNRRSNIFDPFSLDVWDPFKELTSSSLSRENSAIVNARVDWRETPEAHVFKADLPGLKKEEVKVEIEEDSVLKISGERHVEKEDKNDTWHRVERSSGQFTRRFRLPENVKMDQVKAAMENGVLTVT 135
BLAST of CX306403 vs. ExPASy Swiss-Prot
Match: HS17A_ARATH (17.6 kDa class I heat shock protein 1 OS=Arabidopsis thaliana GN=HSP17.6A PE=1 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 2.725e-32 Identity = 76/135 (56.30%), Postives = 85/135 (62.96%), Query Frame = 1 Query: 85 MSLIPSIFGNR-----SVLDPFSSDVWAP---LGSSSNEVSTFASAQVDWKETPEAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSVEKEDKNDKWRRVEXXXXXXXXXXXXPENAKIDQVKASMENGVLTVT 465 MSLIPS FGN ++ DPFS DVW P L S+ S A+A+VDWKET EAHVFKADLPG+ D VL+ISGER VEKE+K D W RVE PEN K+DQVKASMENGVLTVT Sbjct: 1 MSLIPSFFGNNRRINNNIFDPFSLDVWDPFKELQFPSSSSSAIANARVDWKETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGGFSRKFRLPENVKMDQVKASMENGVLTVT 135
BLAST of CX306403 vs. ExPASy Swiss-Prot
Match: HS16B_ORYSJ (16.9 kDa class I heat shock protein 2 OS=Oryza sativa subsp. japonica GN=HSP16.9B PE=2 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 4.648e-32 Identity = 70/131 (53.44%), Postives = 83/131 (63.36%), Query Frame = 1 Query: 100 SIFGNRSVLDPFSSDVWAPLGS---------SSNEVSTFASAQVDWKETPEAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSVEKEDKNDKWRRVEXXXXXXXXXXXXPENAKIDQVKASMENGVLTVT 465 S+ +V DPFS D+W P S S N+ + FA+A++DWKETPE+HVFKADLPG+ +G VL ISG+RS EKEDKNDKW RVE PENAK+DQVKA MENGVLTVT Sbjct: 2 SLVRRSNVFDPFSLDLWDPFDSVFRSVVPATSDNDTAAFANARIDWKETPESHVFKADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVDQVKAGMENGVLTVT 132
BLAST of CX306403 vs. ExPASy Swiss-Prot
Match: HS16A_ORYSJ (16.9 kDa class I heat shock protein 1 OS=Oryza sativa subsp. japonica GN=HSP16.9A PE=1 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 1.036e-31 Identity = 69/131 (52.67%), Postives = 83/131 (63.36%), Query Frame = 1 Query: 100 SIFGNRSVLDPFSSDVWAPLGS---------SSNEVSTFASAQVDWKETPEAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSVEKEDKNDKWRRVEXXXXXXXXXXXXPENAKIDQVKASMENGVLTVT 465 S+ +V DPFS D+W P S S N+ + FA+A++DWKETPE+HVFKADLPG+ +G VL ISG+RS EKEDKNDKW RVE PENAK+DQVKA +ENGVLTVT Sbjct: 2 SLVRRSNVFDPFSLDLWDPFDSVFRSVVPATSDNDTAAFANARIDWKETPESHVFKADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVDQVKAGLENGVLTVT 132 The following BLAST results are available for this feature:
BLAST of CX306403 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 38
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Sequences
The
following sequences are available for this feature:
EST sequence >CX306403 ID=CX306403; Name=CX306403; organism=Citrus clementina; type=EST; length=466bpback to top |